Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
TRAV27A0A087WT01 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TRAV27A0A087WT01 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TRAV27A0A087WT01 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
TRAV27A0A087WT01 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
TRAV27A0A087WT01 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TRAV27A0A087WT01 OR5P1P-201ENST00000299512 925 ntBASIC3.87□□□□□ -1.79
TRAV27A0A087WT01 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
TRAV27A0A087WT01 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TRAV27A0A087WT01 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.87□□□□□ -1.79
TRAV27A0A087WT01 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC3.87□□□□□ -1.79
TRAV27A0A087WT01 GTF2IP2-201ENST00000424290 697 ntBASIC3.87□□□□□ -1.79
TRAV27A0A087WT01 AC006466.1-201ENST00000438721 289 ntBASIC3.87□□□□□ -1.79
TRAV27A0A087WT01 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC3.87□□□□□ -1.79
TRAV27A0A087WT01 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC3.87□□□□□ -1.79
TRAV27A0A087WT01 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.87□□□□□ -1.79
TRAV27A0A087WT01 AP006289.1-201ENST00000538089 277 ntBASIC3.87□□□□□ -1.79
TRAV27A0A087WT01 AC006064.5-201ENST00000541782 248 ntBASIC3.87□□□□□ -1.79
TRAV27A0A087WT01 AL109766.1-201ENST00000555080 552 ntBASIC3.87□□□□□ -1.79
TRAV27A0A087WT01 AC021483.2-201ENST00000567415 758 ntBASIC3.87□□□□□ -1.79
TRAV27A0A087WT01 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC3.87□□□□□ -1.79
TRAV27A0A087WT01 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC3.87□□□□□ -1.79
TRAV27A0A087WT01 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.87□□□□□ -1.79
TRAV27A0A087WT01 MIR6780A-201ENST00000615089 68 ntBASIC3.87□□□□□ -1.79
TRAV27A0A087WT01 AC138907.10-201ENST00000623708 983 ntBASIC3.87□□□□□ -1.79
TRAV27A0A087WT01 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC3.87□□□□□ -1.79
TRAV27A0A087WT01 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
TRAV27A0A087WT01 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
TRAV27A0A087WT01 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
TRAV27A0A087WT01 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TRAV27A0A087WT01 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TRAV27A0A087WT01 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
TRAV27A0A087WT01 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.87□□□□□ -1.79
TRAV27A0A087WT01 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TRAV27A0A087WT01 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
TRAV27A0A087WT01 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.86□□□□□ -1.79
TRAV27A0A087WT01 AC015813.6-201ENST00000624409 5808 ntBASIC3.86□□□□□ -1.79
TRAV27A0A087WT01 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TRAV27A0A087WT01 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TRAV27A0A087WT01 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC3.86□□□□□ -1.79
TRAV27A0A087WT01 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
TRAV27A0A087WT01 RNA5SP388-201ENST00000362584 119 ntBASIC3.86□□□□□ -1.79
TRAV27A0A087WT01 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
TRAV27A0A087WT01 MIR137-201ENST00000385223 102 ntBASIC3.86□□□□□ -1.79
TRAV27A0A087WT01 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.86□□□□□ -1.79
TRAV27A0A087WT01 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC3.86□□□□□ -1.79
TRAV27A0A087WT01 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC3.86□□□□□ -1.79
TRAV27A0A087WT01 EIF1P3-201ENST00000423841 334 ntBASIC3.86□□□□□ -1.79
TRAV27A0A087WT01 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC3.86□□□□□ -1.79
TRAV27A0A087WT01 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC3.86□□□□□ -1.79
TRAV27A0A087WT01 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC3.86□□□□□ -1.79
TRAV27A0A087WT01 RPL23AP52-201ENST00000439311 478 ntBASIC3.86□□□□□ -1.79
TRAV27A0A087WT01 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC3.86□□□□□ -1.79
TRAV27A0A087WT01 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC3.86□□□□□ -1.79
TRAV27A0A087WT01 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC3.86□□□□□ -1.79
TRAV27A0A087WT01 PARP4P3-201ENST00000510265 317 ntBASIC3.86□□□□□ -1.79
TRAV27A0A087WT01 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
TRAV27A0A087WT01 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.86□□□□□ -1.79
TRAV27A0A087WT01 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC3.86□□□□□ -1.79
TRAV27A0A087WT01 OR5M7P-201ENST00000526140 972 ntBASIC3.86□□□□□ -1.79
TRAV27A0A087WT01 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TRAV27A0A087WT01 AC069240.1-201ENST00000548774 375 ntBASIC3.86□□□□□ -1.79
TRAV27A0A087WT01 AC233280.2-201ENST00000603917 1070 ntBASIC3.86□□□□□ -1.79
TRAV27A0A087WT01 AC024940.4-201ENST00000605507 246 ntBASIC3.86□□□□□ -1.79
TRAV27A0A087WT01 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.86□□□□□ -1.79
TRAV27A0A087WT01 AC100827.5-201ENST00000615883 426 ntBASIC3.86□□□□□ -1.79
TRAV27A0A087WT01 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TRAV27A0A087WT01 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TRAV27A0A087WT01 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TRAV27A0A087WT01 ZNF962P-201ENST00000443465 3140 ntBASIC3.86□□□□□ -1.79
TRAV27A0A087WT01 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.86□□□□□ -1.79
TRAV27A0A087WT01 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TRAV27A0A087WT01 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
TRAV27A0A087WT01 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC3.85□□□□□ -1.79
TRAV27A0A087WT01 AC025031.4-201ENST00000621248 3271 ntBASIC3.85□□□□□ -1.79
TRAV27A0A087WT01 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
TRAV27A0A087WT01 AL606537.1-201ENST00000607258 2011 ntBASIC3.85□□□□□ -1.79
TRAV27A0A087WT01 OR56B2P-202ENST00000641377 2453 ntBASIC3.85□□□□□ -1.79
TRAV27A0A087WT01 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TRAV27A0A087WT01 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
TRAV27A0A087WT01 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TRAV27A0A087WT01 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TRAV27A0A087WT01 RPL23AP59-201ENST00000399415 461 ntBASIC3.85□□□□□ -1.79
TRAV27A0A087WT01 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TRAV27A0A087WT01 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TRAV27A0A087WT01 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.85□□□□□ -1.79
TRAV27A0A087WT01 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC3.85□□□□□ -1.79
TRAV27A0A087WT01 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC3.85□□□□□ -1.79
TRAV27A0A087WT01 AL132765.1-201ENST00000434165 553 ntBASIC3.85□□□□□ -1.79
TRAV27A0A087WT01 AC092447.2-201ENST00000435487 669 ntBASIC3.85□□□□□ -1.79
TRAV27A0A087WT01 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TRAV27A0A087WT01 RPS27AP16-201ENST00000492222 470 ntBASIC3.85□□□□□ -1.79
TRAV27A0A087WT01 RPL23AP72-201ENST00000492447 435 ntBASIC3.85□□□□□ -1.79
TRAV27A0A087WT01 AC010374.1-201ENST00000503762 1237 ntBASIC3.85□□□□□ -1.79
TRAV27A0A087WT01 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC3.85□□□□□ -1.79
TRAV27A0A087WT01 AC018552.1-201ENST00000562099 811 ntBASIC3.85□□□□□ -1.79
TRAV27A0A087WT01 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC3.85□□□□□ -1.79
TRAV27A0A087WT01 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.85□□□□□ -1.79
TRAV27A0A087WT01 RPL12P25-202ENST00000598100 674 ntBASIC3.85□□□□□ -1.79
TRAV27A0A087WT01 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms