Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC139769.3-201ENST00000618383 175 ntBASIC4.15□□□□□ -1.75
RHBDD3Q9Y3P4 AC140113.4-201ENST00000622087 222 ntBASIC4.15□□□□□ -1.75
RHBDD3Q9Y3P4 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
RHBDD3Q9Y3P4 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.15□□□□□ -1.75
RHBDD3Q9Y3P4 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
RHBDD3Q9Y3P4 AC109780.1-201ENST00000451768 1344 ntBASIC4.15□□□□□ -1.75
RHBDD3Q9Y3P4 AC108751.5-201ENST00000492880 1336 ntBASIC4.15□□□□□ -1.75
RHBDD3Q9Y3P4 MAPK10-303ENST00000641324 3959 ntBASIC4.15□□□□□ -1.75
RHBDD3Q9Y3P4 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.15□□□□□ -1.75
RHBDD3Q9Y3P4 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.14□□□□□ -1.75
RHBDD3Q9Y3P4 AL133412.1-201ENST00000380194 2992 ntBASIC4.14□□□□□ -1.75
RHBDD3Q9Y3P4 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.14□□□□□ -1.75
RHBDD3Q9Y3P4 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
RHBDD3Q9Y3P4 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RHBDD3Q9Y3P4 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.14□□□□□ -1.75
RHBDD3Q9Y3P4 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.14□□□□□ -1.75
RHBDD3Q9Y3P4 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RHBDD3Q9Y3P4 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.14□□□□□ -1.75
RHBDD3Q9Y3P4 RNU6-386P-201ENST00000362650 107 ntBASIC4.14□□□□□ -1.75
RHBDD3Q9Y3P4 RNA5SP123-201ENST00000363244 119 ntBASIC4.14□□□□□ -1.75
RHBDD3Q9Y3P4 RNU6-666P-201ENST00000363499 107 ntBASIC4.14□□□□□ -1.75
RHBDD3Q9Y3P4 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RHBDD3Q9Y3P4 RNU6-1279P-201ENST00000383917 103 ntBASIC4.14□□□□□ -1.75
RHBDD3Q9Y3P4 DPPA2P3-201ENST00000411853 655 ntBASIC4.14□□□□□ -1.75
RHBDD3Q9Y3P4 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.14□□□□□ -1.75
RHBDD3Q9Y3P4 OR51B3P-201ENST00000412287 913 ntBASIC4.14□□□□□ -1.75
RHBDD3Q9Y3P4 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.14□□□□□ -1.75
RHBDD3Q9Y3P4 RPL23AP27-201ENST00000415161 451 ntBASIC4.14□□□□□ -1.75
RHBDD3Q9Y3P4 RBMY2QP-201ENST00000429799 1147 ntBASIC4.14□□□□□ -1.75
RHBDD3Q9Y3P4 RPS17P8-201ENST00000434525 335 ntBASIC4.14□□□□□ -1.75
RHBDD3Q9Y3P4 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.14□□□□□ -1.75
RHBDD3Q9Y3P4 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.14□□□□□ -1.75
RHBDD3Q9Y3P4 AC112498.1-201ENST00000444401 332 ntBASIC4.14□□□□□ -1.75
RHBDD3Q9Y3P4 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.14□□□□□ -1.75
RHBDD3Q9Y3P4 AC104651.2-201ENST00000447549 528 ntBASIC4.14□□□□□ -1.75
RHBDD3Q9Y3P4 SLC25A18P1-201ENST00000449385 454 ntBASIC4.14□□□□□ -1.75
RHBDD3Q9Y3P4 AC234781.3-201ENST00000452540 973 ntBASIC4.14□□□□□ -1.75
RHBDD3Q9Y3P4 EIF2S2P4-201ENST00000461070 984 ntBASIC4.14□□□□□ -1.75
RHBDD3Q9Y3P4 AC074386.1-201ENST00000476560 767 ntBASIC4.14□□□□□ -1.75
RHBDD3Q9Y3P4 RN7SL817P-201ENST00000480777 288 ntBASIC4.14□□□□□ -1.75
RHBDD3Q9Y3P4 PRELID3BP7-201ENST00000503606 469 ntBASIC4.14□□□□□ -1.75
RHBDD3Q9Y3P4 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.14□□□□□ -1.75
RHBDD3Q9Y3P4 AC147055.3-201ENST00000510547 851 ntBASIC4.14□□□□□ -1.75
RHBDD3Q9Y3P4 MORF4L1P3-201ENST00000525966 950 ntBASIC4.14□□□□□ -1.75
RHBDD3Q9Y3P4 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
RHBDD3Q9Y3P4 HMGN2P6-201ENST00000551091 273 ntBASIC4.14□□□□□ -1.75
RHBDD3Q9Y3P4 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.14□□□□□ -1.75
RHBDD3Q9Y3P4 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.14□□□□□ -1.75
RHBDD3Q9Y3P4 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.14□□□□□ -1.75
RHBDD3Q9Y3P4 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC4.14□□□□□ -1.75
RHBDD3Q9Y3P4 SS18L2P2-201ENST00000583960 235 ntBASIC4.14□□□□□ -1.75
RHBDD3Q9Y3P4 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.14□□□□□ -1.75
RHBDD3Q9Y3P4 VN1R84P-201ENST00000593697 235 ntBASIC4.14□□□□□ -1.75
RHBDD3Q9Y3P4 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.14□□□□□ -1.75
RHBDD3Q9Y3P4 AC020910.3-201ENST00000603701 874 ntBASIC4.14□□□□□ -1.75
RHBDD3Q9Y3P4 AL049844.2-201ENST00000604280 628 ntBASIC4.14□□□□□ -1.75
RHBDD3Q9Y3P4 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.14□□□□□ -1.75
RHBDD3Q9Y3P4 AL096803.3-201ENST00000609032 532 ntBASIC4.14□□□□□ -1.75
RHBDD3Q9Y3P4 uc_338.18-201ENST00000615451 175 ntBASIC4.14□□□□□ -1.75
RHBDD3Q9Y3P4 AC016769.4-201ENST00000616893 535 ntBASIC4.14□□□□□ -1.75
RHBDD3Q9Y3P4 AC091905.4-201ENST00000623432 202 ntBASIC4.14□□□□□ -1.75
RHBDD3Q9Y3P4 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RHBDD3Q9Y3P4 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RHBDD3Q9Y3P4 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.14□□□□□ -1.75
RHBDD3Q9Y3P4 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
RHBDD3Q9Y3P4 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RHBDD3Q9Y3P4 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
RHBDD3Q9Y3P4 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RHBDD3Q9Y3P4 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
RHBDD3Q9Y3P4 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.13□□□□□ -1.75
RHBDD3Q9Y3P4 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
RHBDD3Q9Y3P4 AC018529.3-201ENST00000624212 2254 ntBASIC4.13□□□□□ -1.75
RHBDD3Q9Y3P4 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RHBDD3Q9Y3P4 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RHBDD3Q9Y3P4 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.13□□□□□ -1.75
RHBDD3Q9Y3P4 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.13□□□□□ -1.75
RHBDD3Q9Y3P4 Z74021.1-201ENST00000423610 407 ntBASIC4.13□□□□□ -1.75
RHBDD3Q9Y3P4 CEACAMP7-201ENST00000444105 496 ntBASIC4.13□□□□□ -1.75
RHBDD3Q9Y3P4 TRY2P-201ENST00000448860 689 ntBASIC4.13□□□□□ -1.75
RHBDD3Q9Y3P4 FCF1P7-201ENST00000451185 558 ntBASIC4.13□□□□□ -1.75
RHBDD3Q9Y3P4 OR52A4P-201ENST00000472867 958 ntBASIC4.13□□□□□ -1.75
RHBDD3Q9Y3P4 RN7SL177P-201ENST00000476596 299 ntBASIC4.13□□□□□ -1.75
RHBDD3Q9Y3P4 RN7SL808P-201ENST00000496066 299 ntBASIC4.13□□□□□ -1.75
RHBDD3Q9Y3P4 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC4.13□□□□□ -1.75
RHBDD3Q9Y3P4 RNA5SP497-201ENST00000516081 97 ntBASIC4.13□□□□□ -1.75
RHBDD3Q9Y3P4 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.13□□□□□ -1.75
RHBDD3Q9Y3P4 GCSHP4-201ENST00000538792 439 ntBASIC4.13□□□□□ -1.75
RHBDD3Q9Y3P4 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC4.13□□□□□ -1.75
RHBDD3Q9Y3P4 AC022884.3-201ENST00000579571 248 ntBASIC4.13□□□□□ -1.75
RHBDD3Q9Y3P4 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.13□□□□□ -1.75
RHBDD3Q9Y3P4 AC087283.1-201ENST00000604029 1074 ntBASIC4.13□□□□□ -1.75
RHBDD3Q9Y3P4 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.13□□□□□ -1.75
RHBDD3Q9Y3P4 AL445222.1-201ENST00000607259 628 ntBASIC4.13□□□□□ -1.75
RHBDD3Q9Y3P4 AP000894.4-201ENST00000610185 483 ntBASIC4.13□□□□□ -1.75
RHBDD3Q9Y3P4 AC007497.1-201ENST00000610421 561 ntBASIC4.13□□□□□ -1.75
RHBDD3Q9Y3P4 SDR42E1P1-201ENST00000611327 477 ntBASIC4.13□□□□□ -1.75
RHBDD3Q9Y3P4 AC234782.5-201ENST00000617723 324 ntBASIC4.13□□□□□ -1.75
RHBDD3Q9Y3P4 AC000123.2-201ENST00000623124 461 ntBASIC4.13□□□□□ -1.75
RHBDD3Q9Y3P4 AC067852.7-201ENST00000623270 535 ntBASIC4.13□□□□□ -1.75
RHBDD3Q9Y3P4 AC019080.5-201ENST00000624891 757 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms