Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.52□□□□□ -1.69
NDE1Q9NXR1 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.52□□□□□ -1.69
NDE1Q9NXR1 FGF7P3-201ENST00000454645 303 ntBASIC4.52□□□□□ -1.69
NDE1Q9NXR1 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC4.52□□□□□ -1.69
NDE1Q9NXR1 RN7SL809P-201ENST00000482040 297 ntBASIC4.52□□□□□ -1.69
NDE1Q9NXR1 AC104109.1-201ENST00000498563 436 ntBASIC4.52□□□□□ -1.69
NDE1Q9NXR1 AC015795.1-201ENST00000513669 327 ntBASIC4.52□□□□□ -1.69
NDE1Q9NXR1 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.52□□□□□ -1.69
NDE1Q9NXR1 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC4.52□□□□□ -1.69
NDE1Q9NXR1 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC4.52□□□□□ -1.69
NDE1Q9NXR1 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.52□□□□□ -1.69
NDE1Q9NXR1 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.52□□□□□ -1.69
NDE1Q9NXR1 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC4.52□□□□□ -1.69
NDE1Q9NXR1 AC104695.2-201ENST00000605056 775 ntBASIC4.52□□□□□ -1.69
NDE1Q9NXR1 AP000894.4-201ENST00000610185 483 ntBASIC4.52□□□□□ -1.69
NDE1Q9NXR1 CR589904.2-201ENST00000612533 440 ntBASIC4.52□□□□□ -1.69
NDE1Q9NXR1 AC015922.4-201ENST00000612568 690 ntBASIC4.52□□□□□ -1.69
NDE1Q9NXR1 AC109309.2-201ENST00000612597 332 ntBASIC4.52□□□□□ -1.69
NDE1Q9NXR1 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.52□□□□□ -1.69
NDE1Q9NXR1 AC005840.5-201ENST00000619166 599 ntBASIC4.52□□□□□ -1.69
NDE1Q9NXR1 AL445493.3-201ENST00000619568 477 ntBASIC4.52□□□□□ -1.69
NDE1Q9NXR1 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.52□□□□□ -1.69
NDE1Q9NXR1 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
NDE1Q9NXR1 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
NDE1Q9NXR1 AC105074.1-201ENST00000623380 3095 ntBASIC4.52□□□□□ -1.69
NDE1Q9NXR1 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NDE1Q9NXR1 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC4.52□□□□□ -1.69
NDE1Q9NXR1 AL031119.1-201ENST00000404707 1879 ntBASIC4.52□□□□□ -1.69
NDE1Q9NXR1 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
NDE1Q9NXR1 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
NDE1Q9NXR1 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
NDE1Q9NXR1 SNORD74.4-201ENST00000364129 80 ntBASIC4.51□□□□□ -1.69
NDE1Q9NXR1 RNA5SP428-201ENST00000365129 132 ntBASIC4.51□□□□□ -1.69
NDE1Q9NXR1 SNORD51.1-201ENST00000365405 77 ntBASIC4.51□□□□□ -1.69
NDE1Q9NXR1 AL589647.1-201ENST00000402485 466 ntBASIC4.51□□□□□ -1.69
NDE1Q9NXR1 DPPA2P3-201ENST00000411853 655 ntBASIC4.51□□□□□ -1.69
NDE1Q9NXR1 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC4.51□□□□□ -1.69
NDE1Q9NXR1 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.51□□□□□ -1.69
NDE1Q9NXR1 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.51□□□□□ -1.69
NDE1Q9NXR1 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.51□□□□□ -1.69
NDE1Q9NXR1 DNAJA1P5-201ENST00000440278 943 ntBASIC4.51□□□□□ -1.69
NDE1Q9NXR1 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.51□□□□□ -1.69
NDE1Q9NXR1 RPL36AP39-201ENST00000445859 318 ntBASIC4.51□□□□□ -1.69
NDE1Q9NXR1 RPS27AP15-201ENST00000447672 466 ntBASIC4.51□□□□□ -1.69
NDE1Q9NXR1 RAB28P3-201ENST00000448325 597 ntBASIC4.51□□□□□ -1.69
NDE1Q9NXR1 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC4.51□□□□□ -1.69
NDE1Q9NXR1 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.51□□□□□ -1.69
NDE1Q9NXR1 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.51□□□□□ -1.69
NDE1Q9NXR1 AC104629.1-201ENST00000494226 508 ntBASIC4.51□□□□□ -1.69
NDE1Q9NXR1 RN7SL466P-201ENST00000497546 295 ntBASIC4.51□□□□□ -1.69
NDE1Q9NXR1 MTCO1P31-201ENST00000506355 492 ntBASIC4.51□□□□□ -1.69
NDE1Q9NXR1 HMGN1P15-201ENST00000513870 295 ntBASIC4.51□□□□□ -1.69
NDE1Q9NXR1 SNORD46.2-201ENST00000516021 102 ntBASIC4.51□□□□□ -1.69
NDE1Q9NXR1 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.51□□□□□ -1.69
NDE1Q9NXR1 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
NDE1Q9NXR1 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.51□□□□□ -1.69
NDE1Q9NXR1 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC4.51□□□□□ -1.69
NDE1Q9NXR1 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.51□□□□□ -1.69
NDE1Q9NXR1 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
NDE1Q9NXR1 PDCD5P1-201ENST00000543528 309 ntBASIC4.51□□□□□ -1.69
NDE1Q9NXR1 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.51□□□□□ -1.69
NDE1Q9NXR1 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
NDE1Q9NXR1 AL049779.2-201ENST00000553847 315 ntBASIC4.51□□□□□ -1.69
NDE1Q9NXR1 AL121839.1-201ENST00000556233 1185 ntBASIC4.51□□□□□ -1.69
NDE1Q9NXR1 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
NDE1Q9NXR1 AC027176.2-201ENST00000559166 746 ntBASIC4.51□□□□□ -1.69
NDE1Q9NXR1 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.51□□□□□ -1.69
NDE1Q9NXR1 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.51□□□□□ -1.69
NDE1Q9NXR1 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC4.51□□□□□ -1.69
NDE1Q9NXR1 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.51□□□□□ -1.69
NDE1Q9NXR1 AL591926.8-201ENST00000616876 211 ntBASIC4.51□□□□□ -1.69
NDE1Q9NXR1 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC4.51□□□□□ -1.69
NDE1Q9NXR1 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.51□□□□□ -1.69
NDE1Q9NXR1 AC026124.2-201ENST00000621847 656 ntBASIC4.51□□□□□ -1.69
NDE1Q9NXR1 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
NDE1Q9NXR1 AC015908.5-201ENST00000623289 343 ntBASIC4.51□□□□□ -1.69
NDE1Q9NXR1 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC4.51□□□□□ -1.69
NDE1Q9NXR1 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC4.51□□□□□ -1.69
NDE1Q9NXR1 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC4.51□□□□□ -1.69
NDE1Q9NXR1 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC4.51□□□□□ -1.69
NDE1Q9NXR1 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
NDE1Q9NXR1 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
NDE1Q9NXR1 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.51□□□□□ -1.69
NDE1Q9NXR1 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
NDE1Q9NXR1 AL592182.3-201ENST00000642132 3304 ntBASIC4.51□□□□□ -1.69
NDE1Q9NXR1 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
NDE1Q9NXR1 AC011493.1-201ENST00000596753 1632 ntBASIC4.5□□□□□ -1.69
NDE1Q9NXR1 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.5□□□□□ -1.69
NDE1Q9NXR1 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
NDE1Q9NXR1 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
NDE1Q9NXR1 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.5□□□□□ -1.69
NDE1Q9NXR1 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
NDE1Q9NXR1 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
NDE1Q9NXR1 MIR513A2-201ENST00000385249 127 ntBASIC4.5□□□□□ -1.69
NDE1Q9NXR1 AL590762.2-201ENST00000395798 571 ntBASIC4.5□□□□□ -1.69
NDE1Q9NXR1 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
NDE1Q9NXR1 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC4.5□□□□□ -1.69
NDE1Q9NXR1 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NDE1Q9NXR1 AC092570.3-201ENST00000420113 693 ntBASIC4.5□□□□□ -1.69
NDE1Q9NXR1 IPMKP1-201ENST00000425988 855 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms