Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.58□□□□□ -1.52
CCM2LQ9NUG4 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 LINC02019-201ENST00000608605 2060 ntBASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 TMSB4XP4-201ENST00000323496 618 ntBASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 RN7SKP149-201ENST00000363008 344 ntBASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 RNU6-1151P-201ENST00000384684 107 ntBASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 AL021407.1-201ENST00000404531 386 ntBASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 AL133264.1-201ENST00000407157 562 ntBASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 RNA5SP178-201ENST00000410380 128 ntBASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 REREP1Y-201ENST00000422655 198 ntBASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 AL136231.1-201ENST00000429407 730 ntBASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 REREP2Y-201ENST00000439103 200 ntBASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 AC009961.3-201ENST00000449832 765 ntBASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 HIGD1AP16-201ENST00000450986 258 ntBASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 PPIAP27-201ENST00000453800 265 ntBASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 AC023194.2-201ENST00000465398 406 ntBASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 MTND4LP3-201ENST00000468320 276 ntBASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 RAP1BP2-201ENST00000478270 544 ntBASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 SETP14-201ENST00000497538 873 ntBASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 AC025458.1-201ENST00000506046 166 ntBASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 AC008494.2-201ENST00000514544 370 ntBASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 GAPDHP62-201ENST00000515313 990 ntBASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 Y_RNA.655-201ENST00000515919 96 ntBASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 RNU6-885P-201ENST00000516607 104 ntBASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 snoU109.6-201ENST00000516831 118 ntBASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 LY96-202ENST00000518893 430 ntTSL 3 BASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 AC103881.1-201ENST00000603476 538 ntBASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 AL451086.1-201ENST00000605596 223 ntBASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 AC092266.1-201ENST00000610958 165 ntBASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 MIR6133-201ENST00000617057 108 ntBASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 AC127024.6-201ENST00000621598 424 ntBASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 AC129915.3-201ENST00000634128 948 ntBASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 AC093775.1-201ENST00000624154 1868 ntBASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 BCORP1-203ENST00000513194 5093 ntBASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 AC015689.2-201ENST00000528172 1738 ntBASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 AC133552.1-201ENST00000569988 4007 ntBASIC5.57□□□□□ -1.52
CCM2LQ9NUG4 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.56□□□□□ -1.52
CCM2LQ9NUG4 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CCM2LQ9NUG4 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.56□□□□□ -1.52
CCM2LQ9NUG4 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CCM2LQ9NUG4 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
CCM2LQ9NUG4 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
CCM2LQ9NUG4 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CCM2LQ9NUG4 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CCM2LQ9NUG4 OR10R3P-201ENST00000361688 942 ntBASIC5.56□□□□□ -1.52
CCM2LQ9NUG4 RNU6-582P-201ENST00000362989 107 ntBASIC5.56□□□□□ -1.52
CCM2LQ9NUG4 RNA5SP346-201ENST00000363541 121 ntBASIC5.56□□□□□ -1.52
CCM2LQ9NUG4 RNA5SP211-201ENST00000365516 117 ntBASIC5.56□□□□□ -1.52
CCM2LQ9NUG4 RPL23AP47-201ENST00000408017 460 ntBASIC5.56□□□□□ -1.52
CCM2LQ9NUG4 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC5.56□□□□□ -1.52
CCM2LQ9NUG4 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC5.56□□□□□ -1.52
CCM2LQ9NUG4 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.56□□□□□ -1.52
CCM2LQ9NUG4 RNGTTP1-201ENST00000420965 728 ntBASIC5.56□□□□□ -1.52
CCM2LQ9NUG4 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC5.56□□□□□ -1.52
CCM2LQ9NUG4 RPL31P54-201ENST00000429803 370 ntBASIC5.56□□□□□ -1.52
CCM2LQ9NUG4 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.56□□□□□ -1.52
CCM2LQ9NUG4 AC098826.1-201ENST00000433943 471 ntBASIC5.56□□□□□ -1.52
CCM2LQ9NUG4 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC5.56□□□□□ -1.52
CCM2LQ9NUG4 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.56□□□□□ -1.52
CCM2LQ9NUG4 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.56□□□□□ -1.52
CCM2LQ9NUG4 THAP5P1-201ENST00000439089 262 ntBASIC5.56□□□□□ -1.52
CCM2LQ9NUG4 FHP1-201ENST00000442741 703 ntBASIC5.56□□□□□ -1.52
CCM2LQ9NUG4 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms