Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
VTA1Q9NP79 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC6.05□□□□□ -1.44
VTA1Q9NP79 AC000367.1-201ENST00000452711 1766 ntBASIC6.05□□□□□ -1.44
VTA1Q9NP79 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
VTA1Q9NP79 AC125336.1-201ENST00000508893 2827 ntBASIC6.05□□□□□ -1.44
VTA1Q9NP79 AP005435.3-201ENST00000531260 3198 ntBASIC6.05□□□□□ -1.44
VTA1Q9NP79 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
VTA1Q9NP79 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.05□□□□□ -1.44
VTA1Q9NP79 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
VTA1Q9NP79 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
VTA1Q9NP79 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
VTA1Q9NP79 AC046144.1-201ENST00000478559 1853 ntBASIC6.05□□□□□ -1.44
VTA1Q9NP79 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
VTA1Q9NP79 TANK-205ENST00000405852 2155 ntTSL 5 BASIC6.04□□□□□ -1.44
VTA1Q9NP79 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC6.04□□□□□ -1.44
VTA1Q9NP79 MTND4P31-201ENST00000425607 1343 ntBASIC6.04□□□□□ -1.44
VTA1Q9NP79 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC6.04□□□□□ -1.44
VTA1Q9NP79 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC6.04□□□□□ -1.44
VTA1Q9NP79 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.04□□□□□ -1.44
VTA1Q9NP79 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
VTA1Q9NP79 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.04□□□□□ -1.44
VTA1Q9NP79 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC6.04□□□□□ -1.44
VTA1Q9NP79 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
VTA1Q9NP79 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC6.04□□□□□ -1.44
VTA1Q9NP79 RNU4-4P-201ENST00000364588 130 ntBASIC6.04□□□□□ -1.44
VTA1Q9NP79 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
VTA1Q9NP79 RNU6-98P-201ENST00000384173 107 ntBASIC6.04□□□□□ -1.44
VTA1Q9NP79 MIR105-1-201ENST00000385222 81 ntBASIC6.04□□□□□ -1.44
VTA1Q9NP79 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
VTA1Q9NP79 HSPA8P15-201ENST00000401676 786 ntBASIC6.04□□□□□ -1.44
VTA1Q9NP79 AL590290.1-201ENST00000405336 380 ntBASIC6.04□□□□□ -1.44
VTA1Q9NP79 AL356131.1-201ENST00000405826 414 ntBASIC6.04□□□□□ -1.44
VTA1Q9NP79 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC6.04□□□□□ -1.44
VTA1Q9NP79 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC6.04□□□□□ -1.44
VTA1Q9NP79 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC6.04□□□□□ -1.44
VTA1Q9NP79 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC6.04□□□□□ -1.44
VTA1Q9NP79 CDY14P-201ENST00000431260 1014 ntBASIC6.04□□□□□ -1.44
VTA1Q9NP79 CDY12P-201ENST00000440679 1015 ntBASIC6.04□□□□□ -1.44
VTA1Q9NP79 AC092647.3-201ENST00000443044 633 ntBASIC6.04□□□□□ -1.44
VTA1Q9NP79 CDY13P-201ENST00000445813 1015 ntBASIC6.04□□□□□ -1.44
VTA1Q9NP79 AC233982.1-201ENST00000451247 436 ntBASIC6.04□□□□□ -1.44
VTA1Q9NP79 CDY23P-201ENST00000451661 1014 ntBASIC6.04□□□□□ -1.44
VTA1Q9NP79 HIGD1AP8-201ENST00000453927 274 ntBASIC6.04□□□□□ -1.44
VTA1Q9NP79 AC091685.2-201ENST00000454924 864 ntBASIC6.04□□□□□ -1.44
VTA1Q9NP79 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC6.04□□□□□ -1.44
VTA1Q9NP79 snoU13.29-201ENST00000459370 104 ntBASIC6.04□□□□□ -1.44
VTA1Q9NP79 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC6.04□□□□□ -1.44
VTA1Q9NP79 AC010486.3-201ENST00000511602 785 ntBASIC6.04□□□□□ -1.44
VTA1Q9NP79 SNORA70.11-201ENST00000515987 138 ntBASIC6.04□□□□□ -1.44
VTA1Q9NP79 SNORA70.13-201ENST00000516116 138 ntBASIC6.04□□□□□ -1.44
VTA1Q9NP79 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC6.04□□□□□ -1.44
VTA1Q9NP79 AP001922.4-201ENST00000526967 290 ntBASIC6.04□□□□□ -1.44
VTA1Q9NP79 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
VTA1Q9NP79 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC6.04□□□□□ -1.44
VTA1Q9NP79 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
VTA1Q9NP79 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.04□□□□□ -1.44
VTA1Q9NP79 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC6.04□□□□□ -1.44
VTA1Q9NP79 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC6.04□□□□□ -1.44
VTA1Q9NP79 AC015688.2-201ENST00000584523 262 ntBASIC6.04□□□□□ -1.44
VTA1Q9NP79 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC6.04□□□□□ -1.44
VTA1Q9NP79 AP000769.2-201ENST00000602344 396 ntBASIC6.04□□□□□ -1.44
VTA1Q9NP79 AC090525.3-201ENST00000605601 189 ntBASIC6.04□□□□□ -1.44
VTA1Q9NP79 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC6.04□□□□□ -1.44
VTA1Q9NP79 AC024257.5-201ENST00000612739 531 ntBASIC6.04□□□□□ -1.44
VTA1Q9NP79 AP001784.1-201ENST00000624107 428 ntBASIC6.04□□□□□ -1.44
VTA1Q9NP79 AC087821.2-201ENST00000637086 450 ntBASIC6.04□□□□□ -1.44
VTA1Q9NP79 AC073869.8-201ENST00000641806 335 ntBASIC6.04□□□□□ -1.44
VTA1Q9NP79 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
VTA1Q9NP79 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC6.04□□□□□ -1.44
VTA1Q9NP79 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
VTA1Q9NP79 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
VTA1Q9NP79 AP000473.2-201ENST00000602659 1537 ntBASIC6.04□□□□□ -1.44
VTA1Q9NP79 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
VTA1Q9NP79 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
VTA1Q9NP79 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
VTA1Q9NP79 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC6.03□□□□□ -1.44
VTA1Q9NP79 CASC19-260ENST00000641828 2001 ntBASIC6.03□□□□□ -1.44
VTA1Q9NP79 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
VTA1Q9NP79 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
VTA1Q9NP79 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.03□□□□□ -1.44
VTA1Q9NP79 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.03□□□□□ -1.44
VTA1Q9NP79 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
VTA1Q9NP79 NACA3P-201ENST00000359690 648 ntBASIC6.03□□□□□ -1.44
VTA1Q9NP79 SNORA40.2-201ENST00000390847 128 ntBASIC6.03□□□□□ -1.44
VTA1Q9NP79 AL590084.1-201ENST00000407885 387 ntBASIC6.03□□□□□ -1.44
VTA1Q9NP79 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
VTA1Q9NP79 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC6.03□□□□□ -1.44
VTA1Q9NP79 AL139128.1-201ENST00000413921 941 ntBASIC6.03□□□□□ -1.44
VTA1Q9NP79 AL008987.1-201ENST00000415528 237 ntBASIC6.03□□□□□ -1.44
VTA1Q9NP79 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC6.03□□□□□ -1.44
VTA1Q9NP79 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC6.03□□□□□ -1.44
VTA1Q9NP79 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
VTA1Q9NP79 RHEBP2-201ENST00000450289 600 ntBASIC6.03□□□□□ -1.44
VTA1Q9NP79 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC6.03□□□□□ -1.44
VTA1Q9NP79 AC104634.1-201ENST00000452720 462 ntBASIC6.03□□□□□ -1.44
VTA1Q9NP79 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC6.03□□□□□ -1.44
VTA1Q9NP79 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC6.03□□□□□ -1.44
VTA1Q9NP79 GTF2F2P1-201ENST00000511083 675 ntBASIC6.03□□□□□ -1.44
VTA1Q9NP79 EIF3KP3-201ENST00000514461 639 ntBASIC6.03□□□□□ -1.44
VTA1Q9NP79 AP000926.4-201ENST00000527351 454 ntBASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms