Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 PAXBP1P1-201ENST00000449315 447 ntBASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 OR52E7P-201ENST00000452394 933 ntBASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 HSPE1P22-201ENST00000456856 327 ntBASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 RN7SL254P-201ENST00000460609 284 ntBASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 RPL5P24-201ENST00000463742 885 ntBASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 AP002884.1-201ENST00000479691 655 ntBASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 AC124945.1-201ENST00000485133 188 ntBASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 RPS7P6-201ENST00000485777 579 ntBASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 AP002453.1-201ENST00000492327 668 ntBASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 IGBP1P5-201ENST00000507524 1000 ntBASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 AC090958.1-201ENST00000511122 351 ntBASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 AC087808.1-201ENST00000520501 361 ntBASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 AC083923.1-201ENST00000523708 376 ntBASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 OR6M2P-201ENST00000529831 871 ntBASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 AC005363.1-201ENST00000530779 351 ntBASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 OR7K1P-201ENST00000546439 926 ntBASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 AC025260.1-201ENST00000548858 430 ntBASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 MIR132-201ENST00000591554 101 ntBASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 AP001823.1-201ENST00000604056 1003 ntBASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 BNIP3P4-201ENST00000604946 565 ntBASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 RN7SL261P-201ENST00000613441 282 ntBASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
SEC61A2Q9H9S3 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 AC093671.1-201ENST00000624981 2929 ntBASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 IFIT1P1-201ENST00000400497 1449 ntBASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 AC011416.1-201ENST00000514947 1732 ntBASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 Y_RNA.11-201ENST00000362375 109 ntBASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 RNU5F-7P-201ENST00000363696 115 ntBASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 RN7SKP186-201ENST00000365371 303 ntBASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 AL034403.1-201ENST00000399414 885 ntBASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 RPS27AP11-201ENST00000402798 447 ntBASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 AL139098.1-201ENST00000407291 389 ntBASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 AC002524.1-201ENST00000411687 547 ntBASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 UBTFL3-201ENST00000418934 1024 ntBASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 AKR1B10P1-201ENST00000425765 942 ntBASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 MTCO1P54-201ENST00000430139 712 ntBASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 MTND6P5-201ENST00000448266 512 ntBASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 AC093166.3-201ENST00000448785 303 ntBASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 RPS4XP12-201ENST00000461747 709 ntBASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 UBTFL6-201ENST00000477929 1024 ntBASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 MTND6P6-201ENST00000478031 263 ntBASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 AC079080.1-201ENST00000479841 822 ntBASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 AL358832.1-201ENST00000497800 389 ntBASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 DYNLL1P6-201ENST00000503440 264 ntBASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 FAM92A1P2-202ENST00000504766 877 ntBASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 AC117522.1-201ENST00000509821 380 ntBASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms