Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
ABCA3Q99758 AC068870.3-201ENST00000625077 2536 ntBASIC5.69□□□□□ -1.5
ABCA3Q99758 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ABCA3Q99758 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.69□□□□□ -1.5
ABCA3Q99758 OR5BE1P-201ENST00000425977 939 ntBASIC5.69□□□□□ -1.5
ABCA3Q99758 RPL5P2-201ENST00000429598 854 ntBASIC5.69□□□□□ -1.5
ABCA3Q99758 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC5.69□□□□□ -1.5
ABCA3Q99758 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC5.69□□□□□ -1.5
ABCA3Q99758 ABCF2P2-201ENST00000450549 296 ntBASIC5.69□□□□□ -1.5
ABCA3Q99758 RPL35AP15-201ENST00000468042 339 ntBASIC5.69□□□□□ -1.5
ABCA3Q99758 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.69□□□□□ -1.5
ABCA3Q99758 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ABCA3Q99758 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ABCA3Q99758 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ABCA3Q99758 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
ABCA3Q99758 OR5BE1P-202ENST00000641168 1176 ntBASIC5.69□□□□□ -1.5
ABCA3Q99758 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
ABCA3Q99758 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ABCA3Q99758 AC100778.3-201ENST00000580060 1750 ntBASIC5.69□□□□□ -1.5
ABCA3Q99758 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC5.69□□□□□ -1.5
ABCA3Q99758 AC109446.4-201ENST00000623235 2755 ntBASIC5.68□□□□□ -1.5
ABCA3Q99758 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5.68□□□□□ -1.5
ABCA3Q99758 AL356968.2-201ENST00000412769 1257 ntBASIC5.68□□□□□ -1.5
ABCA3Q99758 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC5.68□□□□□ -1.5
ABCA3Q99758 HMGN2P31-201ENST00000432430 273 ntBASIC5.68□□□□□ -1.5
ABCA3Q99758 PPIAP13-201ENST00000434706 478 ntBASIC5.68□□□□□ -1.5
ABCA3Q99758 RPS4XP4-201ENST00000443195 763 ntBASIC5.68□□□□□ -1.5
ABCA3Q99758 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC5.68□□□□□ -1.5
ABCA3Q99758 RPL36AP13-201ENST00000457490 317 ntBASIC5.68□□□□□ -1.5
ABCA3Q99758 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.68□□□□□ -1.5
ABCA3Q99758 ACTR3BP4-201ENST00000503033 1244 ntBASIC5.68□□□□□ -1.5
ABCA3Q99758 AC006499.5-201ENST00000505037 514 ntBASIC5.68□□□□□ -1.5
ABCA3Q99758 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.68□□□□□ -1.5
ABCA3Q99758 AC091178.1-203ENST00000584586 279 ntBASIC5.68□□□□□ -1.5
ABCA3Q99758 AL160290.3-201ENST00000604869 165 ntBASIC5.68□□□□□ -1.5
ABCA3Q99758 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC5.68□□□□□ -1.5
ABCA3Q99758 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC5.68□□□□□ -1.5
ABCA3Q99758 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC5.68□□□□□ -1.5
ABCA3Q99758 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.68□□□□□ -1.5
ABCA3Q99758 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
ABCA3Q99758 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
ABCA3Q99758 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
ABCA3Q99758 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
ABCA3Q99758 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.68□□□□□ -1.5
ABCA3Q99758 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ABCA3Q99758 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.68□□□□□ -1.5
ABCA3Q99758 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
ABCA3Q99758 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
ABCA3Q99758 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ABCA3Q99758 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
ABCA3Q99758 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
ABCA3Q99758 MTCO1P54-201ENST00000430139 712 ntBASIC5.68□□□□□ -1.5
ABCA3Q99758 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.68□□□□□ -1.5
ABCA3Q99758 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.68□□□□□ -1.5
ABCA3Q99758 AC097486.1-201ENST00000515331 210 ntBASIC5.68□□□□□ -1.5
ABCA3Q99758 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC5.68□□□□□ -1.5
ABCA3Q99758 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC5.68□□□□□ -1.5
ABCA3Q99758 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC5.68□□□□□ -1.5
ABCA3Q99758 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
ABCA3Q99758 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.68□□□□□ -1.5
ABCA3Q99758 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.68□□□□□ -1.5
ABCA3Q99758 SRGNP1-201ENST00000603392 451 ntBASIC5.68□□□□□ -1.5
ABCA3Q99758 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC5.68□□□□□ -1.5
ABCA3Q99758 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
ABCA3Q99758 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
ABCA3Q99758 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
ABCA3Q99758 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
ABCA3Q99758 AC239868.2-201ENST00000564237 4527 ntBASIC5.67□□□□□ -1.5
ABCA3Q99758 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
ABCA3Q99758 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
ABCA3Q99758 RN7SKP156-201ENST00000410308 342 ntBASIC5.67□□□□□ -1.5
ABCA3Q99758 HSPE1P12-201ENST00000412576 301 ntBASIC5.67□□□□□ -1.5
ABCA3Q99758 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC5.67□□□□□ -1.5
ABCA3Q99758 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
ABCA3Q99758 AC027216.1-201ENST00000577726 685 ntBASIC5.67□□□□□ -1.5
ABCA3Q99758 AC010487.1-201ENST00000594408 1172 ntBASIC5.67□□□□□ -1.5
ABCA3Q99758 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC5.67□□□□□ -1.5
ABCA3Q99758 AC019176.2-201ENST00000611579 315 ntBASIC5.67□□□□□ -1.5
ABCA3Q99758 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
ABCA3Q99758 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.67□□□□□ -1.5
ABCA3Q99758 NXPH1-205ENST00000602349 1953 ntBASIC5.67□□□□□ -1.5
ABCA3Q99758 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
ABCA3Q99758 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.67□□□□□ -1.5
ABCA3Q99758 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
ABCA3Q99758 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
ABCA3Q99758 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
ABCA3Q99758 USP9YP4-201ENST00000424401 1745 ntBASIC5.67□□□□□ -1.5
ABCA3Q99758 ZNF285B-201ENST00000561698 1767 ntBASIC5.66□□□□□ -1.5
ABCA3Q99758 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
ABCA3Q99758 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
ABCA3Q99758 RNU1-20P-201ENST00000363314 162 ntBASIC5.66□□□□□ -1.5
ABCA3Q99758 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
ABCA3Q99758 MIR7-3-201ENST00000384898 110 ntBASIC5.66□□□□□ -1.5
ABCA3Q99758 RAB9AP3-201ENST00000412737 573 ntBASIC5.66□□□□□ -1.5
ABCA3Q99758 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
ABCA3Q99758 AP000907.1-201ENST00000428428 510 ntBASIC5.66□□□□□ -1.5
ABCA3Q99758 RAB9AP1-201ENST00000449393 573 ntBASIC5.66□□□□□ -1.5
ABCA3Q99758 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC5.66□□□□□ -1.5
ABCA3Q99758 RPL7P49-201ENST00000471402 708 ntBASIC5.66□□□□□ -1.5
ABCA3Q99758 AC110792.1-201ENST00000491826 472 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms