Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
SLC44A3Q8N4M1 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SLC44A3Q8N4M1 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
SLC44A3Q8N4M1 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SLC44A3Q8N4M1 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.51□□□□□ -1.53
SLC44A3Q8N4M1 RNU6-1251P-201ENST00000364502 107 ntBASIC5.51□□□□□ -1.53
SLC44A3Q8N4M1 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.51□□□□□ -1.53
SLC44A3Q8N4M1 RNA5SP87-201ENST00000384155 118 ntBASIC5.51□□□□□ -1.53
SLC44A3Q8N4M1 RNU5A-2P-201ENST00000384337 116 ntBASIC5.51□□□□□ -1.53
SLC44A3Q8N4M1 RNU6-83P-201ENST00000384568 112 ntBASIC5.51□□□□□ -1.53
SLC44A3Q8N4M1 MIR600-201ENST00000385007 98 ntBASIC5.51□□□□□ -1.53
SLC44A3Q8N4M1 HSPA8P15-201ENST00000401676 786 ntBASIC5.51□□□□□ -1.53
SLC44A3Q8N4M1 Y_RNA.619-201ENST00000410951 90 ntBASIC5.51□□□□□ -1.53
SLC44A3Q8N4M1 RPSAP35-201ENST00000413753 818 ntBASIC5.51□□□□□ -1.53
SLC44A3Q8N4M1 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.51□□□□□ -1.53
SLC44A3Q8N4M1 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC5.51□□□□□ -1.53
SLC44A3Q8N4M1 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.51□□□□□ -1.53
SLC44A3Q8N4M1 AL365203.2-201ENST00000423444 196 ntBASIC5.51□□□□□ -1.53
SLC44A3Q8N4M1 AL035407.1-201ENST00000429211 571 ntBASIC5.51□□□□□ -1.53
SLC44A3Q8N4M1 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.51□□□□□ -1.53
SLC44A3Q8N4M1 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.51□□□□□ -1.53
SLC44A3Q8N4M1 AC091390.1-201ENST00000433904 331 ntBASIC5.51□□□□□ -1.53
SLC44A3Q8N4M1 ISCA1P2-201ENST00000438679 421 ntBASIC5.51□□□□□ -1.53
SLC44A3Q8N4M1 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC5.51□□□□□ -1.53
SLC44A3Q8N4M1 MTND2P19-201ENST00000449129 1012 ntBASIC5.51□□□□□ -1.53
SLC44A3Q8N4M1 AL096803.2-201ENST00000450032 677 ntBASIC5.51□□□□□ -1.53
SLC44A3Q8N4M1 AL672167.3-201ENST00000465951 960 ntBASIC5.51□□□□□ -1.53
SLC44A3Q8N4M1 AC097484.1-201ENST00000471148 389 ntBASIC5.51□□□□□ -1.53
SLC44A3Q8N4M1 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.51□□□□□ -1.53
SLC44A3Q8N4M1 PRELID3BP7-201ENST00000503606 469 ntBASIC5.51□□□□□ -1.53
SLC44A3Q8N4M1 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.51□□□□□ -1.53
SLC44A3Q8N4M1 GTF2F2P1-201ENST00000511083 675 ntBASIC5.51□□□□□ -1.53
SLC44A3Q8N4M1 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SLC44A3Q8N4M1 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SLC44A3Q8N4M1 OR5AM1P-201ENST00000532136 1032 ntBASIC5.51□□□□□ -1.53
SLC44A3Q8N4M1 AP002373.2-201ENST00000541631 1060 ntBASIC5.51□□□□□ -1.53
SLC44A3Q8N4M1 AC008033.2-201ENST00000542626 177 ntBASIC5.51□□□□□ -1.53
SLC44A3Q8N4M1 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SLC44A3Q8N4M1 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC5.51□□□□□ -1.53
SLC44A3Q8N4M1 EDDM3DP-201ENST00000554692 434 ntBASIC5.51□□□□□ -1.53
SLC44A3Q8N4M1 AC021483.2-201ENST00000567415 758 ntBASIC5.51□□□□□ -1.53
SLC44A3Q8N4M1 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC5.51□□□□□ -1.53
SLC44A3Q8N4M1 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC5.51□□□□□ -1.53
SLC44A3Q8N4M1 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.51□□□□□ -1.53
SLC44A3Q8N4M1 AC015922.4-201ENST00000612568 690 ntBASIC5.51□□□□□ -1.53
SLC44A3Q8N4M1 MIR7641-1-201ENST00000627518 61 ntBASIC5.51□□□□□ -1.53
SLC44A3Q8N4M1 AC000095.2-202ENST00000637415 154 ntBASIC5.51□□□□□ -1.53
SLC44A3Q8N4M1 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
SLC44A3Q8N4M1 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SLC44A3Q8N4M1 AL078621.3-201ENST00000623707 2042 ntBASIC5.51□□□□□ -1.53
SLC44A3Q8N4M1 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
SLC44A3Q8N4M1 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SLC44A3Q8N4M1 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SLC44A3Q8N4M1 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SLC44A3Q8N4M1 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
SLC44A3Q8N4M1 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
SLC44A3Q8N4M1 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.5□□□□□ -1.53
SLC44A3Q8N4M1 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
SLC44A3Q8N4M1 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SLC44A3Q8N4M1 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SLC44A3Q8N4M1 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SLC44A3Q8N4M1 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SLC44A3Q8N4M1 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SLC44A3Q8N4M1 RNU1-136P-201ENST00000384181 164 ntBASIC5.5□□□□□ -1.53
SLC44A3Q8N4M1 MIR105-1-201ENST00000385222 81 ntBASIC5.5□□□□□ -1.53
SLC44A3Q8N4M1 U3.23-201ENST00000391132 200 ntBASIC5.5□□□□□ -1.53
SLC44A3Q8N4M1 OR8V1P-201ENST00000395193 873 ntBASIC5.5□□□□□ -1.53
SLC44A3Q8N4M1 AL121978.1-201ENST00000402778 359 ntBASIC5.5□□□□□ -1.53
SLC44A3Q8N4M1 RPL7P27-201ENST00000403775 720 ntBASIC5.5□□□□□ -1.53
SLC44A3Q8N4M1 ATF1P1-201ENST00000406040 927 ntBASIC5.5□□□□□ -1.53
SLC44A3Q8N4M1 RNU2-17P-201ENST00000410290 190 ntBASIC5.5□□□□□ -1.53
SLC44A3Q8N4M1 AC092638.1-201ENST00000411966 1275 ntBASIC5.5□□□□□ -1.53
SLC44A3Q8N4M1 COX6B1P1-201ENST00000415962 213 ntBASIC5.5□□□□□ -1.53
SLC44A3Q8N4M1 PTP4A1P5-201ENST00000420305 455 ntBASIC5.5□□□□□ -1.53
SLC44A3Q8N4M1 AC008072.1-201ENST00000434254 824 ntBASIC5.5□□□□□ -1.53
SLC44A3Q8N4M1 MTND2P40-201ENST00000436718 841 ntBASIC5.5□□□□□ -1.53
SLC44A3Q8N4M1 HSFY3P-201ENST00000444242 1191 ntBASIC5.5□□□□□ -1.53
SLC44A3Q8N4M1 PTENP1-201ENST00000447117 1215 ntBASIC5.5□□□□□ -1.53
SLC44A3Q8N4M1 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC5.5□□□□□ -1.53
SLC44A3Q8N4M1 RPS4XP6-201ENST00000477670 797 ntBASIC5.5□□□□□ -1.53
SLC44A3Q8N4M1 RN7SL481P-201ENST00000477764 299 ntBASIC5.5□□□□□ -1.53
SLC44A3Q8N4M1 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SLC44A3Q8N4M1 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.5□□□□□ -1.53
SLC44A3Q8N4M1 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.5□□□□□ -1.53
SLC44A3Q8N4M1 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.5□□□□□ -1.53
SLC44A3Q8N4M1 RNU5A-4P-201ENST00000516588 111 ntBASIC5.5□□□□□ -1.53
SLC44A3Q8N4M1 AC105233.3-201ENST00000531125 744 ntBASIC5.5□□□□□ -1.53
SLC44A3Q8N4M1 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC5.5□□□□□ -1.53
SLC44A3Q8N4M1 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.5□□□□□ -1.53
SLC44A3Q8N4M1 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.5□□□□□ -1.53
SLC44A3Q8N4M1 AC125494.2-201ENST00000602431 657 ntBASIC5.5□□□□□ -1.53
SLC44A3Q8N4M1 AC068790.6-201ENST00000602558 258 ntBASIC5.5□□□□□ -1.53
SLC44A3Q8N4M1 AL020997.3-201ENST00000602843 359 ntBASIC5.5□□□□□ -1.53
SLC44A3Q8N4M1 AC007786.3-201ENST00000615154 596 ntBASIC5.5□□□□□ -1.53
SLC44A3Q8N4M1 AC087385.3-201ENST00000620477 187 ntBASIC5.5□□□□□ -1.53
SLC44A3Q8N4M1 AC015660.5-201ENST00000623238 564 ntBASIC5.5□□□□□ -1.53
SLC44A3Q8N4M1 AC139713.2-210ENST00000641741 992 ntBASIC5.5□□□□□ -1.53
SLC44A3Q8N4M1 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.5□□□□□ -1.53
SLC44A3Q8N4M1 MTND4P26-201ENST00000415971 1359 ntBASIC5.5□□□□□ -1.53
SLC44A3Q8N4M1 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 350.4 ms