Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
C9orf40Q8IXQ3 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
C9orf40Q8IXQ3 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
C9orf40Q8IXQ3 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.27□□□□□ -1.73
C9orf40Q8IXQ3 DDX18P4-201ENST00000511690 1966 ntBASIC4.27□□□□□ -1.73
C9orf40Q8IXQ3 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
C9orf40Q8IXQ3 Z98755.1-201ENST00000407015 1384 ntBASIC4.27□□□□□ -1.73
C9orf40Q8IXQ3 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
C9orf40Q8IXQ3 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
C9orf40Q8IXQ3 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
C9orf40Q8IXQ3 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.26□□□□□ -1.73
C9orf40Q8IXQ3 Z95327.2-201ENST00000414579 1873 ntBASIC4.26□□□□□ -1.73
C9orf40Q8IXQ3 AL132640.2-201ENST00000559968 1698 ntBASIC4.26□□□□□ -1.73
C9orf40Q8IXQ3 AL672167.1-205ENST00000641112 3080 ntBASIC4.26□□□□□ -1.73
C9orf40Q8IXQ3 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.26□□□□□ -1.73
C9orf40Q8IXQ3 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
C9orf40Q8IXQ3 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
C9orf40Q8IXQ3 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
C9orf40Q8IXQ3 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.26□□□□□ -1.73
C9orf40Q8IXQ3 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
C9orf40Q8IXQ3 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
C9orf40Q8IXQ3 RN7SKP115-201ENST00000363177 317 ntBASIC4.26□□□□□ -1.73
C9orf40Q8IXQ3 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.26□□□□□ -1.73
C9orf40Q8IXQ3 OR1F12-201ENST00000402365 945 ntBASIC4.26□□□□□ -1.73
C9orf40Q8IXQ3 MTCYBP7-201ENST00000419540 1134 ntBASIC4.26□□□□□ -1.73
C9orf40Q8IXQ3 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.26□□□□□ -1.73
C9orf40Q8IXQ3 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.26□□□□□ -1.73
C9orf40Q8IXQ3 AL591623.2-201ENST00000449978 222 ntBASIC4.26□□□□□ -1.73
C9orf40Q8IXQ3 AL935212.3-201ENST00000450729 284 ntBASIC4.26□□□□□ -1.73
C9orf40Q8IXQ3 ISCUP1-201ENST00000454451 448 ntBASIC4.26□□□□□ -1.73
C9orf40Q8IXQ3 NDUFA12P1-201ENST00000455914 406 ntBASIC4.26□□□□□ -1.73
C9orf40Q8IXQ3 AP002345.1-201ENST00000456493 928 ntBASIC4.26□□□□□ -1.73
C9orf40Q8IXQ3 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.26□□□□□ -1.73
C9orf40Q8IXQ3 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC4.26□□□□□ -1.73
C9orf40Q8IXQ3 AC093720.1-201ENST00000505681 714 ntBASIC4.26□□□□□ -1.73
C9orf40Q8IXQ3 AC111000.3-201ENST00000508057 576 ntBASIC4.26□□□□□ -1.73
C9orf40Q8IXQ3 FABP5P6-201ENST00000510588 409 ntBASIC4.26□□□□□ -1.73
C9orf40Q8IXQ3 HMGB1P47-201ENST00000511281 589 ntBASIC4.26□□□□□ -1.73
C9orf40Q8IXQ3 ACTR6P1-201ENST00000514311 1104 ntBASIC4.26□□□□□ -1.73
C9orf40Q8IXQ3 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
C9orf40Q8IXQ3 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
C9orf40Q8IXQ3 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.26□□□□□ -1.73
C9orf40Q8IXQ3 CR383656.6-201ENST00000550518 394 ntBASIC4.26□□□□□ -1.73
C9orf40Q8IXQ3 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.26□□□□□ -1.73
C9orf40Q8IXQ3 AL731537.2-201ENST00000561565 951 ntBASIC4.26□□□□□ -1.73
C9orf40Q8IXQ3 MIMT1-201ENST00000597105 1050 ntBASIC4.26□□□□□ -1.73
C9orf40Q8IXQ3 BMS1P7-201ENST00000602440 1052 ntBASIC4.26□□□□□ -1.73
C9orf40Q8IXQ3 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.26□□□□□ -1.73
C9orf40Q8IXQ3 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.26□□□□□ -1.73
C9orf40Q8IXQ3 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
C9orf40Q8IXQ3 AC107021.2-201ENST00000567714 2095 ntBASIC4.26□□□□□ -1.73
C9orf40Q8IXQ3 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
C9orf40Q8IXQ3 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.26□□□□□ -1.73
C9orf40Q8IXQ3 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
C9orf40Q8IXQ3 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.26□□□□□ -1.73
C9orf40Q8IXQ3 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.26□□□□□ -1.73
C9orf40Q8IXQ3 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
C9orf40Q8IXQ3 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.26□□□□□ -1.73
C9orf40Q8IXQ3 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.26□□□□□ -1.73
C9orf40Q8IXQ3 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.26□□□□□ -1.73
C9orf40Q8IXQ3 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
C9orf40Q8IXQ3 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
C9orf40Q8IXQ3 AL355852.1-201ENST00000454081 1771 ntBASIC4.25□□□□□ -1.73
C9orf40Q8IXQ3 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
C9orf40Q8IXQ3 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
C9orf40Q8IXQ3 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
C9orf40Q8IXQ3 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
C9orf40Q8IXQ3 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
C9orf40Q8IXQ3 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
C9orf40Q8IXQ3 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
C9orf40Q8IXQ3 MIR659-201ENST00000384963 97 ntBASIC4.25□□□□□ -1.73
C9orf40Q8IXQ3 RNU6-1320P-201ENST00000390838 107 ntBASIC4.25□□□□□ -1.73
C9orf40Q8IXQ3 RNU6-1269P-201ENST00000391139 107 ntBASIC4.25□□□□□ -1.73
C9orf40Q8IXQ3 GLULP6-201ENST00000399502 913 ntBASIC4.25□□□□□ -1.73
C9orf40Q8IXQ3 RPS3AP23-201ENST00000401762 784 ntBASIC4.25□□□□□ -1.73
C9orf40Q8IXQ3 RPA2P2-201ENST00000419698 796 ntBASIC4.25□□□□□ -1.73
C9orf40Q8IXQ3 UQCRBP1-201ENST00000421129 336 ntBASIC4.25□□□□□ -1.73
C9orf40Q8IXQ3 RPL21P43-201ENST00000425440 472 ntBASIC4.25□□□□□ -1.73
C9orf40Q8IXQ3 ARL4AP4-201ENST00000434170 518 ntBASIC4.25□□□□□ -1.73
C9orf40Q8IXQ3 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.25□□□□□ -1.73
C9orf40Q8IXQ3 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
C9orf40Q8IXQ3 ARL2BPP10-201ENST00000446487 531 ntBASIC4.25□□□□□ -1.73
C9orf40Q8IXQ3 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
C9orf40Q8IXQ3 VN1R48P-201ENST00000448149 1036 ntBASIC4.25□□□□□ -1.73
C9orf40Q8IXQ3 AL500527.1-201ENST00000448532 255 ntBASIC4.25□□□□□ -1.73
C9orf40Q8IXQ3 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
C9orf40Q8IXQ3 RNU6-599P-201ENST00000459383 107 ntBASIC4.25□□□□□ -1.73
C9orf40Q8IXQ3 RNU6-1193P-201ENST00000459461 107 ntBASIC4.25□□□□□ -1.73
C9orf40Q8IXQ3 AC096741.1-201ENST00000472250 846 ntBASIC4.25□□□□□ -1.73
C9orf40Q8IXQ3 LARP7P4-201ENST00000481075 878 ntBASIC4.25□□□□□ -1.73
C9orf40Q8IXQ3 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
C9orf40Q8IXQ3 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.25□□□□□ -1.73
C9orf40Q8IXQ3 MTND2P31-201ENST00000512602 616 ntBASIC4.25□□□□□ -1.73
C9orf40Q8IXQ3 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
C9orf40Q8IXQ3 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
C9orf40Q8IXQ3 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.25□□□□□ -1.73
C9orf40Q8IXQ3 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC4.25□□□□□ -1.73
C9orf40Q8IXQ3 AC079075.1-201ENST00000559543 878 ntBASIC4.25□□□□□ -1.73
C9orf40Q8IXQ3 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.25□□□□□ -1.73
C9orf40Q8IXQ3 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms