Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
RNF220Q5VTB9 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
RNF220Q5VTB9 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RNF220Q5VTB9 RN7SKP171-201ENST00000364417 303 ntBASIC5.34□□□□□ -1.55
RNF220Q5VTB9 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.34□□□□□ -1.55
RNF220Q5VTB9 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
RNF220Q5VTB9 AGR3-202ENST00000402239 563 ntTSL 2 BASIC5.34□□□□□ -1.55
RNF220Q5VTB9 LYPLA1P3-201ENST00000402650 695 ntBASIC5.34□□□□□ -1.55
RNF220Q5VTB9 RN7SKP286-201ENST00000410894 299 ntBASIC5.34□□□□□ -1.55
RNF220Q5VTB9 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC5.34□□□□□ -1.55
RNF220Q5VTB9 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.34□□□□□ -1.55
RNF220Q5VTB9 MTND5P25-201ENST00000430499 799 ntBASIC5.34□□□□□ -1.55
RNF220Q5VTB9 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.34□□□□□ -1.55
RNF220Q5VTB9 RPL37P1-201ENST00000432310 284 ntBASIC5.34□□□□□ -1.55
RNF220Q5VTB9 AC073143.1-201ENST00000436316 395 ntBASIC5.34□□□□□ -1.55
RNF220Q5VTB9 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC5.34□□□□□ -1.55
RNF220Q5VTB9 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC5.34□□□□□ -1.55
RNF220Q5VTB9 MTCO2P25-201ENST00000447065 681 ntBASIC5.34□□□□□ -1.55
RNF220Q5VTB9 COX6CP18-201ENST00000448769 222 ntBASIC5.34□□□□□ -1.55
RNF220Q5VTB9 MYO5BP2-201ENST00000449815 1277 ntBASIC5.34□□□□□ -1.55
RNF220Q5VTB9 ANKRD26P4-201ENST00000455755 950 ntBASIC5.34□□□□□ -1.55
RNF220Q5VTB9 RPL5P24-201ENST00000463742 885 ntBASIC5.34□□□□□ -1.55
RNF220Q5VTB9 AC023194.2-201ENST00000465398 406 ntBASIC5.34□□□□□ -1.55
RNF220Q5VTB9 UBFD1P1-201ENST00000473259 814 ntBASIC5.34□□□□□ -1.55
RNF220Q5VTB9 AC021006.1-201ENST00000489849 553 ntBASIC5.34□□□□□ -1.55
RNF220Q5VTB9 AC011352.3-201ENST00000505162 593 ntBASIC5.34□□□□□ -1.55
RNF220Q5VTB9 MTCYBP16-201ENST00000509187 1129 ntBASIC5.34□□□□□ -1.55
RNF220Q5VTB9 NDUFB4P12-201ENST00000513465 390 ntBASIC5.34□□□□□ -1.55
RNF220Q5VTB9 RN7SKP238-201ENST00000516483 249 ntBASIC5.34□□□□□ -1.55
RNF220Q5VTB9 SCARNA6.1-201ENST00000516989 238 ntBASIC5.34□□□□□ -1.55
RNF220Q5VTB9 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC5.34□□□□□ -1.55
RNF220Q5VTB9 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.34□□□□□ -1.55
RNF220Q5VTB9 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC5.34□□□□□ -1.55
RNF220Q5VTB9 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC5.34□□□□□ -1.55
RNF220Q5VTB9 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.34□□□□□ -1.55
RNF220Q5VTB9 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.34□□□□□ -1.55
RNF220Q5VTB9 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.34□□□□□ -1.55
RNF220Q5VTB9 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC5.34□□□□□ -1.55
RNF220Q5VTB9 DUXAP6-201ENST00000553858 601 ntBASIC5.34□□□□□ -1.55
RNF220Q5VTB9 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.34□□□□□ -1.55
RNF220Q5VTB9 AC040958.1-201ENST00000561102 201 ntBASIC5.34□□□□□ -1.55
RNF220Q5VTB9 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.34□□□□□ -1.55
RNF220Q5VTB9 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.34□□□□□ -1.55
RNF220Q5VTB9 AC002310.3-201ENST00000569728 723 ntBASIC5.34□□□□□ -1.55
RNF220Q5VTB9 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC5.34□□□□□ -1.55
RNF220Q5VTB9 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC5.34□□□□□ -1.55
RNF220Q5VTB9 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
RNF220Q5VTB9 AC233702.9-201ENST00000581528 203 ntBASIC5.34□□□□□ -1.55
RNF220Q5VTB9 MIR7853-201ENST00000584820 132 ntBASIC5.34□□□□□ -1.55
RNF220Q5VTB9 AL390838.2-201ENST00000602394 274 ntBASIC5.34□□□□□ -1.55
RNF220Q5VTB9 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.34□□□□□ -1.55
RNF220Q5VTB9 AL139344.1-201ENST00000605228 195 ntBASIC5.34□□□□□ -1.55
RNF220Q5VTB9 AC108673.3-201ENST00000609183 335 ntBASIC5.34□□□□□ -1.55
RNF220Q5VTB9 AL359091.2-201ENST00000609303 556 ntBASIC5.34□□□□□ -1.55
RNF220Q5VTB9 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.34□□□□□ -1.55
RNF220Q5VTB9 AP001052.1-201ENST00000626421 99 ntBASIC5.34□□□□□ -1.55
RNF220Q5VTB9 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
RNF220Q5VTB9 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.34□□□□□ -1.56
RNF220Q5VTB9 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
RNF220Q5VTB9 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
RNF220Q5VTB9 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
RNF220Q5VTB9 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RNF220Q5VTB9 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RNF220Q5VTB9 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.33□□□□□ -1.56
RNF220Q5VTB9 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
RNF220Q5VTB9 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
RNF220Q5VTB9 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RNF220Q5VTB9 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RNF220Q5VTB9 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
RNF220Q5VTB9 RNU6-1066P-201ENST00000363573 105 ntBASIC5.33□□□□□ -1.56
RNF220Q5VTB9 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
RNF220Q5VTB9 RNU6-1300P-201ENST00000391046 108 ntBASIC5.33□□□□□ -1.56
RNF220Q5VTB9 AL161909.1-201ENST00000397390 712 ntBASIC5.33□□□□□ -1.56
RNF220Q5VTB9 MIR1275-201ENST00000408770 80 ntBASIC5.33□□□□□ -1.56
RNF220Q5VTB9 NRBF2P2-201ENST00000413087 861 ntBASIC5.33□□□□□ -1.56
RNF220Q5VTB9 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC5.33□□□□□ -1.56
RNF220Q5VTB9 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.33□□□□□ -1.56
RNF220Q5VTB9 COX5BP7-201ENST00000414780 274 ntBASIC5.33□□□□□ -1.56
RNF220Q5VTB9 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.33□□□□□ -1.56
RNF220Q5VTB9 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.33□□□□□ -1.56
RNF220Q5VTB9 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.33□□□□□ -1.56
RNF220Q5VTB9 BX284632.2-201ENST00000421091 399 ntBASIC5.33□□□□□ -1.56
RNF220Q5VTB9 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.33□□□□□ -1.56
RNF220Q5VTB9 RPL7P44-201ENST00000424827 742 ntBASIC5.33□□□□□ -1.56
RNF220Q5VTB9 USP9YP11-201ENST00000427537 717 ntBASIC5.33□□□□□ -1.56
RNF220Q5VTB9 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.33□□□□□ -1.56
RNF220Q5VTB9 AC007559.1-201ENST00000428736 355 ntBASIC5.33□□□□□ -1.56
RNF220Q5VTB9 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.33□□□□□ -1.56
RNF220Q5VTB9 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
RNF220Q5VTB9 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC5.33□□□□□ -1.56
RNF220Q5VTB9 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.33□□□□□ -1.56
RNF220Q5VTB9 AL008629.1-201ENST00000438615 184 ntBASIC5.33□□□□□ -1.56
RNF220Q5VTB9 AL512605.1-202ENST00000441919 381 ntBASIC5.33□□□□□ -1.56
RNF220Q5VTB9 AL359955.2-201ENST00000445380 353 ntBASIC5.33□□□□□ -1.56
RNF220Q5VTB9 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.33□□□□□ -1.56
RNF220Q5VTB9 OR7E116P-201ENST00000448529 957 ntBASIC5.33□□□□□ -1.56
RNF220Q5VTB9 AL591363.1-201ENST00000450091 483 ntBASIC5.33□□□□□ -1.56
RNF220Q5VTB9 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RNF220Q5VTB9 PRPF38AP1-201ENST00000451976 933 ntBASIC5.33□□□□□ -1.56
RNF220Q5VTB9 MEMO1P4-201ENST00000453590 386 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms