Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AL133477.1-201ENST00000457472 514 ntBASIC6.52□□□□□ -1.37
CCDC144BQ3MJ40 RPL5P24-201ENST00000463742 885 ntBASIC6.52□□□□□ -1.37
CCDC144BQ3MJ40 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC6.52□□□□□ -1.37
CCDC144BQ3MJ40 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC6.52□□□□□ -1.37
CCDC144BQ3MJ40 EIF3KP3-201ENST00000514461 639 ntBASIC6.52□□□□□ -1.37
CCDC144BQ3MJ40 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC6.52□□□□□ -1.37
CCDC144BQ3MJ40 NRBF2P4-201ENST00000520874 850 ntBASIC6.52□□□□□ -1.37
CCDC144BQ3MJ40 PDCL2P2-201ENST00000533651 189 ntBASIC6.52□□□□□ -1.37
CCDC144BQ3MJ40 AC007834.2-201ENST00000536310 343 ntBASIC6.52□□□□□ -1.37
CCDC144BQ3MJ40 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC144BQ3MJ40 DUXAP6-201ENST00000553858 601 ntBASIC6.52□□□□□ -1.37
CCDC144BQ3MJ40 AC015720.2-201ENST00000567709 334 ntBASIC6.52□□□□□ -1.37
CCDC144BQ3MJ40 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC6.52□□□□□ -1.37
CCDC144BQ3MJ40 IGKV1OR2-9-201ENST00000603957 287 ntBASIC6.52□□□□□ -1.37
CCDC144BQ3MJ40 IGKV1OR2-11-201ENST00000604120 287 ntBASIC6.52□□□□□ -1.37
CCDC144BQ3MJ40 AC124312.6-202ENST00000623624 418 ntBASIC6.52□□□□□ -1.37
CCDC144BQ3MJ40 OR2L1P-202ENST00000641567 1023 ntBASIC6.52□□□□□ -1.37
CCDC144BQ3MJ40 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC144BQ3MJ40 MAPK6PS3-201ENST00000403865 2162 ntBASIC6.52□□□□□ -1.37
CCDC144BQ3MJ40 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC144BQ3MJ40 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6.52□□□□□ -1.37
CCDC144BQ3MJ40 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC144BQ3MJ40 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC6.52□□□□□ -1.37
CCDC144BQ3MJ40 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC144BQ3MJ40 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC144BQ3MJ40 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC144BQ3MJ40 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
CCDC144BQ3MJ40 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
CCDC144BQ3MJ40 AC125336.1-201ENST00000508893 2827 ntBASIC6.51□□□□□ -1.37
CCDC144BQ3MJ40 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC144BQ3MJ40 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
CCDC144BQ3MJ40 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC144BQ3MJ40 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC144BQ3MJ40 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC144BQ3MJ40 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
CCDC144BQ3MJ40 RN7SKP145-201ENST00000363291 303 ntBASIC6.51□□□□□ -1.37
CCDC144BQ3MJ40 RNU6-839P-201ENST00000363347 108 ntBASIC6.51□□□□□ -1.37
CCDC144BQ3MJ40 RNA5SP131-201ENST00000365452 119 ntBASIC6.51□□□□□ -1.37
CCDC144BQ3MJ40 SNORD65.1-201ENST00000390889 71 ntBASIC6.51□□□□□ -1.37
CCDC144BQ3MJ40 TAF9BP1-201ENST00000396646 746 ntBASIC6.51□□□□□ -1.37
CCDC144BQ3MJ40 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC6.51□□□□□ -1.37
CCDC144BQ3MJ40 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.51□□□□□ -1.37
CCDC144BQ3MJ40 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC6.51□□□□□ -1.37
CCDC144BQ3MJ40 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC6.51□□□□□ -1.37
CCDC144BQ3MJ40 SEPT7P5-201ENST00000434048 306 ntBASIC6.51□□□□□ -1.37
CCDC144BQ3MJ40 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC6.51□□□□□ -1.37
CCDC144BQ3MJ40 PTMAP6-201ENST00000439110 327 ntBASIC6.51□□□□□ -1.37
CCDC144BQ3MJ40 AL034418.1-201ENST00000448675 860 ntBASIC6.51□□□□□ -1.37
CCDC144BQ3MJ40 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6.51□□□□□ -1.37
CCDC144BQ3MJ40 RN7SL610P-201ENST00000463845 291 ntBASIC6.51□□□□□ -1.37
CCDC144BQ3MJ40 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC6.51□□□□□ -1.37
CCDC144BQ3MJ40 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC144BQ3MJ40 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC6.51□□□□□ -1.37
CCDC144BQ3MJ40 RNA5SP92-201ENST00000516437 110 ntBASIC6.51□□□□□ -1.37
CCDC144BQ3MJ40 AC087808.1-201ENST00000520501 361 ntBASIC6.51□□□□□ -1.37
CCDC144BQ3MJ40 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.51□□□□□ -1.37
CCDC144BQ3MJ40 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
CCDC144BQ3MJ40 ASB8-215ENST00000540782 659 ntTSL 3 BASIC6.51□□□□□ -1.37
CCDC144BQ3MJ40 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC6.51□□□□□ -1.37
CCDC144BQ3MJ40 AC004217.3-201ENST00000551552 878 ntBASIC6.51□□□□□ -1.37
CCDC144BQ3MJ40 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC6.51□□□□□ -1.37
CCDC144BQ3MJ40 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC6.51□□□□□ -1.37
CCDC144BQ3MJ40 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.51□□□□□ -1.37
CCDC144BQ3MJ40 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC6.51□□□□□ -1.37
CCDC144BQ3MJ40 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.51□□□□□ -1.37
CCDC144BQ3MJ40 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC6.51□□□□□ -1.37
CCDC144BQ3MJ40 AC010503.3-201ENST00000594355 540 ntBASIC6.51□□□□□ -1.37
CCDC144BQ3MJ40 AL513327.3-201ENST00000602618 469 ntBASIC6.51□□□□□ -1.37
CCDC144BQ3MJ40 AC091488.1-201ENST00000604239 660 ntBASIC6.51□□□□□ -1.37
CCDC144BQ3MJ40 AL139344.1-201ENST00000605228 195 ntBASIC6.51□□□□□ -1.37
CCDC144BQ3MJ40 AC010245.2-201ENST00000606908 1167 ntBASIC6.51□□□□□ -1.37
CCDC144BQ3MJ40 AC023158.2-201ENST00000614876 543 ntBASIC6.51□□□□□ -1.37
CCDC144BQ3MJ40 MIR8080-201ENST00000622224 89 ntBASIC6.51□□□□□ -1.37
CCDC144BQ3MJ40 AC112694.2-201ENST00000623697 768 ntBASIC6.51□□□□□ -1.37
CCDC144BQ3MJ40 AC007490.1-201ENST00000624321 703 ntBASIC6.51□□□□□ -1.37
CCDC144BQ3MJ40 AC005618.4-201ENST00000625053 554 ntBASIC6.51□□□□□ -1.37
CCDC144BQ3MJ40 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
CCDC144BQ3MJ40 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
CCDC144BQ3MJ40 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC144BQ3MJ40 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.51□□□□□ -1.37
CCDC144BQ3MJ40 MFSD8-239ENST00000641590 2479 ntBASIC6.51□□□□□ -1.37
CCDC144BQ3MJ40 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC144BQ3MJ40 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.51□□□□□ -1.37
CCDC144BQ3MJ40 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC6.5□□□□□ -1.37
CCDC144BQ3MJ40 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC144BQ3MJ40 CD86-204ENST00000469710 1604 ntTSL 2 BASIC6.5□□□□□ -1.37
CCDC144BQ3MJ40 USP9YP4-201ENST00000424401 1745 ntBASIC6.5□□□□□ -1.37
CCDC144BQ3MJ40 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC6.5□□□□□ -1.37
CCDC144BQ3MJ40 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
CCDC144BQ3MJ40 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC144BQ3MJ40 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC144BQ3MJ40 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC144BQ3MJ40 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.5□□□□□ -1.37
CCDC144BQ3MJ40 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC144BQ3MJ40 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC144BQ3MJ40 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
CCDC144BQ3MJ40 ALB-202ENST00000401494 1659 ntTSL 5 BASIC6.5□□□□□ -1.37
CCDC144BQ3MJ40 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
CCDC144BQ3MJ40 Y_RNA.192-201ENST00000363977 102 ntBASIC6.5□□□□□ -1.37
CCDC144BQ3MJ40 CASP3-203ENST00000393588 677 ntTSL 4 BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms