Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 DDX39BP1-205ENST00000422507 192 ntBASIC5.27□□□□□ -1.57
HDAC4P56524 VN1R42P-201ENST00000424651 344 ntBASIC5.27□□□□□ -1.57
HDAC4P56524 MTCYBP32-201ENST00000427945 1084 ntBASIC5.27□□□□□ -1.57
HDAC4P56524 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.27□□□□□ -1.57
HDAC4P56524 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.27□□□□□ -1.57
HDAC4P56524 RHOT1P3-201ENST00000436571 331 ntBASIC5.27□□□□□ -1.57
HDAC4P56524 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC5.27□□□□□ -1.57
HDAC4P56524 RPS29P9-201ENST00000440360 171 ntBASIC5.27□□□□□ -1.57
HDAC4P56524 AL645638.1-201ENST00000440519 361 ntBASIC5.27□□□□□ -1.57
HDAC4P56524 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC5.27□□□□□ -1.57
HDAC4P56524 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.27□□□□□ -1.57
HDAC4P56524 SETP6-201ENST00000479329 568 ntBASIC5.27□□□□□ -1.57
HDAC4P56524 RN7SL826P-201ENST00000479724 288 ntBASIC5.27□□□□□ -1.57
HDAC4P56524 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.27□□□□□ -1.57
HDAC4P56524 AC010350.1-201ENST00000504908 231 ntBASIC5.27□□□□□ -1.57
HDAC4P56524 AC108120.2-201ENST00000512973 294 ntBASIC5.27□□□□□ -1.57
HDAC4P56524 snoU109.6-201ENST00000516831 118 ntBASIC5.27□□□□□ -1.57
HDAC4P56524 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.27□□□□□ -1.57
HDAC4P56524 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.27□□□□□ -1.57
HDAC4P56524 HIGD1AP18-201ENST00000520730 278 ntBASIC5.27□□□□□ -1.57
HDAC4P56524 AC022832.1-201ENST00000530718 645 ntBASIC5.27□□□□□ -1.57
HDAC4P56524 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
HDAC4P56524 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.27□□□□□ -1.57
HDAC4P56524 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.27□□□□□ -1.57
HDAC4P56524 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC5.27□□□□□ -1.57
HDAC4P56524 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.27□□□□□ -1.57
HDAC4P56524 NDUFB4P11-201ENST00000560510 395 ntBASIC5.27□□□□□ -1.57
HDAC4P56524 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.27□□□□□ -1.57
HDAC4P56524 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.27□□□□□ -1.57
HDAC4P56524 AC105254.2-201ENST00000603636 436 ntBASIC5.27□□□□□ -1.57
HDAC4P56524 AL158050.2-201ENST00000605336 568 ntBASIC5.27□□□□□ -1.57
HDAC4P56524 AC011447.7-201ENST00000624228 1590 ntBASIC5.27□□□□□ -1.57
HDAC4P56524 AP003485.1-201ENST00000625093 753 ntBASIC5.27□□□□□ -1.57
HDAC4P56524 METTL8-218ENST00000638989 876 ntTSL 5 BASIC5.27□□□□□ -1.57
HDAC4P56524 METTL8-219ENST00000640734 726 ntTSL 2 BASIC5.27□□□□□ -1.57
HDAC4P56524 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
HDAC4P56524 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HDAC4P56524 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HDAC4P56524 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
HDAC4P56524 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
HDAC4P56524 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.27□□□□□ -1.57
HDAC4P56524 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.27□□□□□ -1.57
HDAC4P56524 AC005332.5-201ENST00000591222 2919 ntBASIC5.27□□□□□ -1.57
HDAC4P56524 AL731566.1-201ENST00000620490 1937 ntBASIC5.27□□□□□ -1.57
HDAC4P56524 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HDAC4P56524 TMEM161BP1-201ENST00000457388 1457 ntBASIC5.26□□□□□ -1.57
HDAC4P56524 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HDAC4P56524 AL645568.2-201ENST00000432815 1337 ntBASIC5.26□□□□□ -1.57
HDAC4P56524 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
HDAC4P56524 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
HDAC4P56524 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HDAC4P56524 NEAT1-202ENST00000501122 22743 ntBASIC5.26□□□□□ -1.57
HDAC4P56524 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
HDAC4P56524 RNU6-252P-201ENST00000363232 107 ntBASIC5.26□□□□□ -1.57
HDAC4P56524 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
HDAC4P56524 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
HDAC4P56524 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HDAC4P56524 RNU6-1257P-201ENST00000384625 110 ntBASIC5.26□□□□□ -1.57
HDAC4P56524 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
HDAC4P56524 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HDAC4P56524 CHMP1B2P-201ENST00000399581 597 ntBASIC5.26□□□□□ -1.57
HDAC4P56524 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.26□□□□□ -1.57
HDAC4P56524 RNU4-74P-201ENST00000411280 161 ntBASIC5.26□□□□□ -1.57
HDAC4P56524 SFR1P2-201ENST00000421841 730 ntBASIC5.26□□□□□ -1.57
HDAC4P56524 OR5M12P-201ENST00000423388 929 ntBASIC5.26□□□□□ -1.57
HDAC4P56524 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC5.26□□□□□ -1.57
HDAC4P56524 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC5.26□□□□□ -1.57
HDAC4P56524 TXNP5-201ENST00000441043 315 ntBASIC5.26□□□□□ -1.57
HDAC4P56524 CYCSP24-201ENST00000445119 316 ntBASIC5.26□□□□□ -1.57
HDAC4P56524 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.26□□□□□ -1.57
HDAC4P56524 AC004980.3-201ENST00000447046 365 ntBASIC5.26□□□□□ -1.57
HDAC4P56524 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HDAC4P56524 IGHV5-78-201ENST00000450948 295 ntBASIC5.26□□□□□ -1.57
HDAC4P56524 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.26□□□□□ -1.57
HDAC4P56524 AC093270.2-201ENST00000486157 792 ntBASIC5.26□□□□□ -1.57
HDAC4P56524 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.26□□□□□ -1.57
HDAC4P56524 AC104115.2-201ENST00000523026 687 ntBASIC5.26□□□□□ -1.57
HDAC4P56524 AC012339.2-201ENST00000523996 453 ntBASIC5.26□□□□□ -1.57
HDAC4P56524 AP001372.4-201ENST00000524889 472 ntBASIC5.26□□□□□ -1.57
HDAC4P56524 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC5.26□□□□□ -1.57
HDAC4P56524 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HDAC4P56524 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC5.26□□□□□ -1.57
HDAC4P56524 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.26□□□□□ -1.57
HDAC4P56524 MIR3691-201ENST00000578066 90 ntBASIC5.26□□□□□ -1.57
HDAC4P56524 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.26□□□□□ -1.57
HDAC4P56524 AC006116.3-201ENST00000592968 361 ntBASIC5.26□□□□□ -1.57
HDAC4P56524 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.26□□□□□ -1.57
HDAC4P56524 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.26□□□□□ -1.57
HDAC4P56524 SUMO2P14-201ENST00000604488 293 ntBASIC5.26□□□□□ -1.57
HDAC4P56524 AC026741.1-201ENST00000605892 482 ntBASIC5.26□□□□□ -1.57
HDAC4P56524 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.26□□□□□ -1.57
HDAC4P56524 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.26□□□□□ -1.57
HDAC4P56524 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.26□□□□□ -1.57
HDAC4P56524 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
HDAC4P56524 AC022960.3-201ENST00000619794 441 ntBASIC5.26□□□□□ -1.57
HDAC4P56524 AP001002.2-201ENST00000625137 386 ntBASIC5.26□□□□□ -1.57
HDAC4P56524 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.26□□□□□ -1.57
HDAC4P56524 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.26□□□□□ -1.57
HDAC4P56524 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC5.26□□□□□ -1.57
HDAC4P56524 OR4G3P-201ENST00000633500 913 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms