Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC068287.1-201ENST00000430283 295 ntBASIC4.76□□□□□ -1.65
PDX1P52945 HSFY7P-201ENST00000432672 318 ntBASIC4.76□□□□□ -1.65
PDX1P52945 HMGB3P10-201ENST00000434734 572 ntBASIC4.76□□□□□ -1.65
PDX1P52945 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.76□□□□□ -1.65
PDX1P52945 HSFY8P-201ENST00000437934 318 ntBASIC4.76□□□□□ -1.65
PDX1P52945 RPL7AP61-201ENST00000443410 636 ntBASIC4.76□□□□□ -1.65
PDX1P52945 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.76□□□□□ -1.65
PDX1P52945 HMGN1P5-201ENST00000448591 263 ntBASIC4.76□□□□□ -1.65
PDX1P52945 OR1H1P-201ENST00000448731 937 ntBASIC4.76□□□□□ -1.65
PDX1P52945 TPT1P12-201ENST00000448968 492 ntBASIC4.76□□□□□ -1.65
PDX1P52945 HSFY5P-201ENST00000453726 309 ntBASIC4.76□□□□□ -1.65
PDX1P52945 RPL12P20-201ENST00000475538 479 ntBASIC4.76□□□□□ -1.65
PDX1P52945 NPM1P29-201ENST00000483112 803 ntBASIC4.76□□□□□ -1.65
PDX1P52945 AC107398.1-201ENST00000486904 505 ntBASIC4.76□□□□□ -1.65
PDX1P52945 AC005412.2-201ENST00000492004 341 ntBASIC4.76□□□□□ -1.65
PDX1P52945 AC016550.1-201ENST00000505348 785 ntBASIC4.76□□□□□ -1.65
PDX1P52945 AC111000.3-201ENST00000508057 576 ntBASIC4.76□□□□□ -1.65
PDX1P52945 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.76□□□□□ -1.65
PDX1P52945 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PDX1P52945 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.76□□□□□ -1.65
PDX1P52945 HIGD1AP18-201ENST00000520730 278 ntBASIC4.76□□□□□ -1.65
PDX1P52945 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.76□□□□□ -1.65
PDX1P52945 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.76□□□□□ -1.65
PDX1P52945 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.76□□□□□ -1.65
PDX1P52945 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.76□□□□□ -1.65
PDX1P52945 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
PDX1P52945 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.76□□□□□ -1.65
PDX1P52945 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.76□□□□□ -1.65
PDX1P52945 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.76□□□□□ -1.65
PDX1P52945 BNIP3P31-201ENST00000604515 566 ntBASIC4.76□□□□□ -1.65
PDX1P52945 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.76□□□□□ -1.65
PDX1P52945 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.76□□□□□ -1.65
PDX1P52945 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC4.76□□□□□ -1.65
PDX1P52945 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PDX1P52945 AC027290.2-201ENST00000623210 18662 ntBASIC4.76□□□□□ -1.65
PDX1P52945 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PDX1P52945 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
PDX1P52945 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.76□□□□□ -1.65
PDX1P52945 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
PDX1P52945 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.76□□□□□ -1.65
PDX1P52945 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
PDX1P52945 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
PDX1P52945 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.75□□□□□ -1.65
PDX1P52945 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
PDX1P52945 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PDX1P52945 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PDX1P52945 RAD1P1-201ENST00000231383 813 ntBASIC4.75□□□□□ -1.65
PDX1P52945 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PDX1P52945 BX510359.2-201ENST00000417920 305 ntBASIC4.75□□□□□ -1.65
PDX1P52945 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.75□□□□□ -1.65
PDX1P52945 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC4.75□□□□□ -1.65
PDX1P52945 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PDX1P52945 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC4.75□□□□□ -1.65
PDX1P52945 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.75□□□□□ -1.65
PDX1P52945 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.75□□□□□ -1.65
PDX1P52945 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.75□□□□□ -1.65
PDX1P52945 TCEA1P3-201ENST00000443005 880 ntBASIC4.75□□□□□ -1.65
PDX1P52945 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
PDX1P52945 CYCSP24-201ENST00000445119 316 ntBASIC4.75□□□□□ -1.65
PDX1P52945 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.75□□□□□ -1.65
PDX1P52945 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC4.75□□□□□ -1.65
PDX1P52945 AC010733.1-201ENST00000451515 401 ntBASIC4.75□□□□□ -1.65
PDX1P52945 AC091180.1-201ENST00000462104 372 ntBASIC4.75□□□□□ -1.65
PDX1P52945 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.75□□□□□ -1.65
PDX1P52945 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.75□□□□□ -1.65
PDX1P52945 C1GALT1P2-201ENST00000510813 1104 ntBASIC4.75□□□□□ -1.65
PDX1P52945 AC112198.4-201ENST00000515450 351 ntBASIC4.75□□□□□ -1.65
PDX1P52945 RN7SKP276-201ENST00000516242 268 ntBASIC4.75□□□□□ -1.65
PDX1P52945 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC4.75□□□□□ -1.65
PDX1P52945 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.75□□□□□ -1.65
PDX1P52945 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC4.75□□□□□ -1.65
PDX1P52945 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.75□□□□□ -1.65
PDX1P52945 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.75□□□□□ -1.65
PDX1P52945 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC4.75□□□□□ -1.65
PDX1P52945 AC104072.1-201ENST00000568817 668 ntBASIC4.75□□□□□ -1.65
PDX1P52945 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.75□□□□□ -1.65
PDX1P52945 AC084373.1-201ENST00000603311 235 ntBASIC4.75□□□□□ -1.65
PDX1P52945 AC005034.4-201ENST00000603612 899 ntBASIC4.75□□□□□ -1.65
PDX1P52945 AC018695.5-201ENST00000605872 315 ntBASIC4.75□□□□□ -1.65
PDX1P52945 AC034236.3-201ENST00000605999 461 ntBASIC4.75□□□□□ -1.65
PDX1P52945 AC019193.2-201ENST00000610012 634 ntBASIC4.75□□□□□ -1.65
PDX1P52945 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC4.75□□□□□ -1.65
PDX1P52945 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
PDX1P52945 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PDX1P52945 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.75□□□□□ -1.65
PDX1P52945 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.75□□□□□ -1.65
PDX1P52945 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
PDX1P52945 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PDX1P52945 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.75□□□□□ -1.65
PDX1P52945 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.75□□□□□ -1.65
PDX1P52945 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PDX1P52945 ZNF90P1-201ENST00000480493 1951 ntBASIC4.74□□□□□ -1.65
PDX1P52945 AC093849.1-201ENST00000563631 2209 ntBASIC4.74□□□□□ -1.65
PDX1P52945 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.74□□□□□ -1.65
PDX1P52945 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
PDX1P52945 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
PDX1P52945 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PDX1P52945 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
PDX1P52945 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PDX1P52945 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms