Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 MIR3667-201ENST00000581025 74 ntBASIC4.72□□□□□ -1.65
RAB40ALP0C0E4 MIR4270-201ENST00000581799 70 ntBASIC4.72□□□□□ -1.65
RAB40ALP0C0E4 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.72□□□□□ -1.65
RAB40ALP0C0E4 ABI1P1-201ENST00000603375 1120 ntBASIC4.72□□□□□ -1.65
RAB40ALP0C0E4 AL161616.1-201ENST00000611867 286 ntBASIC4.72□□□□□ -1.65
RAB40ALP0C0E4 uc_338.9-201ENST00000617424 182 ntBASIC4.72□□□□□ -1.65
RAB40ALP0C0E4 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.72□□□□□ -1.65
RAB40ALP0C0E4 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.72□□□□□ -1.65
RAB40ALP0C0E4 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.72□□□□□ -1.65
RAB40ALP0C0E4 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
RAB40ALP0C0E4 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
RAB40ALP0C0E4 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
RAB40ALP0C0E4 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
RAB40ALP0C0E4 AL731566.1-201ENST00000620490 1937 ntBASIC4.72□□□□□ -1.65
RAB40ALP0C0E4 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
RAB40ALP0C0E4 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RAB40ALP0C0E4 AC008432.1-201ENST00000615912 1320 ntBASIC4.72□□□□□ -1.65
RAB40ALP0C0E4 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
RAB40ALP0C0E4 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
RAB40ALP0C0E4 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RAB40ALP0C0E4 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
RAB40ALP0C0E4 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.71□□□□□ -1.66
RAB40ALP0C0E4 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.71□□□□□ -1.66
RAB40ALP0C0E4 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC4.71□□□□□ -1.66
RAB40ALP0C0E4 SNORA62.2-201ENST00000364672 152 ntBASIC4.71□□□□□ -1.66
RAB40ALP0C0E4 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
RAB40ALP0C0E4 SNORA77-201ENST00000408716 125 ntBASIC4.71□□□□□ -1.66
RAB40ALP0C0E4 RPL26P29-201ENST00000415623 438 ntBASIC4.71□□□□□ -1.66
RAB40ALP0C0E4 AF186996.5-201ENST00000418098 904 ntBASIC4.71□□□□□ -1.66
RAB40ALP0C0E4 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.71□□□□□ -1.66
RAB40ALP0C0E4 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.71□□□□□ -1.66
RAB40ALP0C0E4 NIPA2P1-201ENST00000426223 976 ntBASIC4.71□□□□□ -1.66
RAB40ALP0C0E4 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.71□□□□□ -1.66
RAB40ALP0C0E4 COX6CP13-201ENST00000428703 226 ntBASIC4.71□□□□□ -1.66
RAB40ALP0C0E4 AC005189.1-201ENST00000431286 310 ntBASIC4.71□□□□□ -1.66
RAB40ALP0C0E4 MTCO1P43-201ENST00000431831 488 ntBASIC4.71□□□□□ -1.66
RAB40ALP0C0E4 BX323845.1-201ENST00000432417 179 ntBASIC4.71□□□□□ -1.66
RAB40ALP0C0E4 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.71□□□□□ -1.66
RAB40ALP0C0E4 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC4.71□□□□□ -1.66
RAB40ALP0C0E4 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.71□□□□□ -1.66
RAB40ALP0C0E4 RPS29P9-201ENST00000440360 171 ntBASIC4.71□□□□□ -1.66
RAB40ALP0C0E4 AL158053.1-201ENST00000441503 453 ntBASIC4.71□□□□□ -1.66
RAB40ALP0C0E4 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.71□□□□□ -1.66
RAB40ALP0C0E4 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.71□□□□□ -1.66
RAB40ALP0C0E4 RPL6P5-201ENST00000445678 828 ntBASIC4.71□□□□□ -1.66
RAB40ALP0C0E4 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.71□□□□□ -1.66
RAB40ALP0C0E4 AC092685.1-201ENST00000447960 1243 ntBASIC4.71□□□□□ -1.66
RAB40ALP0C0E4 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.71□□□□□ -1.66
RAB40ALP0C0E4 AL513533.1-201ENST00000453728 415 ntBASIC4.71□□□□□ -1.66
RAB40ALP0C0E4 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.71□□□□□ -1.66
RAB40ALP0C0E4 HMGB1P4-201ENST00000455362 567 ntBASIC4.71□□□□□ -1.66
RAB40ALP0C0E4 AC091180.1-201ENST00000462104 372 ntBASIC4.71□□□□□ -1.66
RAB40ALP0C0E4 AC063943.1-201ENST00000465434 453 ntBASIC4.71□□□□□ -1.66
RAB40ALP0C0E4 RPS27AP16-201ENST00000492222 470 ntBASIC4.71□□□□□ -1.66
RAB40ALP0C0E4 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.71□□□□□ -1.66
RAB40ALP0C0E4 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RAB40ALP0C0E4 MTND3P3-201ENST00000505004 126 ntBASIC4.71□□□□□ -1.66
RAB40ALP0C0E4 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RAB40ALP0C0E4 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.71□□□□□ -1.66
RAB40ALP0C0E4 AC121161.1-201ENST00000510606 652 ntBASIC4.71□□□□□ -1.66
RAB40ALP0C0E4 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.71□□□□□ -1.66
RAB40ALP0C0E4 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.71□□□□□ -1.66
RAB40ALP0C0E4 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.71□□□□□ -1.66
RAB40ALP0C0E4 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC4.71□□□□□ -1.66
RAB40ALP0C0E4 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.71□□□□□ -1.66
RAB40ALP0C0E4 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.71□□□□□ -1.66
RAB40ALP0C0E4 AC091042.1-201ENST00000579213 173 ntBASIC4.71□□□□□ -1.66
RAB40ALP0C0E4 DNAJC19P3-201ENST00000594491 331 ntBASIC4.71□□□□□ -1.66
RAB40ALP0C0E4 AC005377.1-201ENST00000605126 456 ntBASIC4.71□□□□□ -1.66
RAB40ALP0C0E4 AL391358.1-201ENST00000605342 190 ntBASIC4.71□□□□□ -1.66
RAB40ALP0C0E4 AC011374.2-201ENST00000607135 526 ntBASIC4.71□□□□□ -1.66
RAB40ALP0C0E4 AC112503.2-201ENST00000609005 552 ntBASIC4.71□□□□□ -1.66
RAB40ALP0C0E4 AC018926.1-201ENST00000616335 435 ntBASIC4.71□□□□□ -1.66
RAB40ALP0C0E4 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.71□□□□□ -1.66
RAB40ALP0C0E4 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RAB40ALP0C0E4 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
RAB40ALP0C0E4 AC000374.1-201ENST00000434698 1745 ntBASIC4.71□□□□□ -1.66
RAB40ALP0C0E4 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RAB40ALP0C0E4 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RAB40ALP0C0E4 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RAB40ALP0C0E4 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RAB40ALP0C0E4 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
RAB40ALP0C0E4 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RAB40ALP0C0E4 AC004817.4-201ENST00000602396 3625 ntBASIC4.7□□□□□ -1.66
RAB40ALP0C0E4 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RAB40ALP0C0E4 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
RAB40ALP0C0E4 AC083843.2-201ENST00000568248 6253 ntBASIC4.7□□□□□ -1.66
RAB40ALP0C0E4 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RAB40ALP0C0E4 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
RAB40ALP0C0E4 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RAB40ALP0C0E4 RN7SKP74-201ENST00000362849 309 ntBASIC4.7□□□□□ -1.66
RAB40ALP0C0E4 ATF1P1-201ENST00000406040 927 ntBASIC4.7□□□□□ -1.66
RAB40ALP0C0E4 RNA5SP113-201ENST00000410486 84 ntBASIC4.7□□□□□ -1.66
RAB40ALP0C0E4 RNU2-50P-201ENST00000410494 143 ntBASIC4.7□□□□□ -1.66
RAB40ALP0C0E4 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.7□□□□□ -1.66
RAB40ALP0C0E4 LINC01881-201ENST00000416103 412 ntBASIC4.7□□□□□ -1.66
RAB40ALP0C0E4 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.7□□□□□ -1.66
RAB40ALP0C0E4 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.7□□□□□ -1.66
RAB40ALP0C0E4 MTCO3P21-201ENST00000430791 643 ntBASIC4.7□□□□□ -1.66
RAB40ALP0C0E4 SLC25A18P1-201ENST00000449385 454 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 137.6 ms