Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PCDHGA1Q9Y5H4 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.87□□□□□ -1.63
PCDHGA1Q9Y5H4 BX510359.2-201ENST00000417920 305 ntBASIC4.87□□□□□ -1.63
PCDHGA1Q9Y5H4 FAR1P1-201ENST00000427163 934 ntBASIC4.87□□□□□ -1.63
PCDHGA1Q9Y5H4 ZNF965P-201ENST00000432501 817 ntBASIC4.87□□□□□ -1.63
PCDHGA1Q9Y5H4 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.87□□□□□ -1.63
PCDHGA1Q9Y5H4 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.87□□□□□ -1.63
PCDHGA1Q9Y5H4 RPL12P46-201ENST00000436610 195 ntBASIC4.87□□□□□ -1.63
PCDHGA1Q9Y5H4 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.87□□□□□ -1.63
PCDHGA1Q9Y5H4 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.87□□□□□ -1.63
PCDHGA1Q9Y5H4 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.87□□□□□ -1.63
PCDHGA1Q9Y5H4 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.87□□□□□ -1.63
PCDHGA1Q9Y5H4 AC010326.1-201ENST00000462726 602 ntBASIC4.87□□□□□ -1.63
PCDHGA1Q9Y5H4 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.87□□□□□ -1.63
PCDHGA1Q9Y5H4 AC023424.1-201ENST00000496058 459 ntBASIC4.87□□□□□ -1.63
PCDHGA1Q9Y5H4 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.87□□□□□ -1.63
PCDHGA1Q9Y5H4 AC097173.1-201ENST00000505862 819 ntBASIC4.87□□□□□ -1.63
PCDHGA1Q9Y5H4 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC4.87□□□□□ -1.63
PCDHGA1Q9Y5H4 RNU6-513P-201ENST00000516104 104 ntBASIC4.87□□□□□ -1.63
PCDHGA1Q9Y5H4 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC4.87□□□□□ -1.63
PCDHGA1Q9Y5H4 AC009643.1-201ENST00000532030 391 ntBASIC4.87□□□□□ -1.63
PCDHGA1Q9Y5H4 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.87□□□□□ -1.63
PCDHGA1Q9Y5H4 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PCDHGA1Q9Y5H4 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.87□□□□□ -1.63
PCDHGA1Q9Y5H4 RN7SL690P-201ENST00000582087 240 ntBASIC4.87□□□□□ -1.63
PCDHGA1Q9Y5H4 AC005242.1-201ENST00000585658 438 ntBASIC4.87□□□□□ -1.63
PCDHGA1Q9Y5H4 AC005520.3-201ENST00000602874 370 ntBASIC4.87□□□□□ -1.63
PCDHGA1Q9Y5H4 SUMO2P14-201ENST00000604488 293 ntBASIC4.87□□□□□ -1.63
PCDHGA1Q9Y5H4 AC010200.2-201ENST00000605098 235 ntBASIC4.87□□□□□ -1.63
PCDHGA1Q9Y5H4 AL008729.2-201ENST00000606393 473 ntBASIC4.87□□□□□ -1.63
PCDHGA1Q9Y5H4 CR589904.2-201ENST00000612533 440 ntBASIC4.87□□□□□ -1.63
PCDHGA1Q9Y5H4 BNIP3P41-202ENST00000616656 861 ntBASIC4.87□□□□□ -1.63
PCDHGA1Q9Y5H4 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.87□□□□□ -1.63
PCDHGA1Q9Y5H4 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.87□□□□□ -1.63
PCDHGA1Q9Y5H4 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.87□□□□□ -1.63
PCDHGA1Q9Y5H4 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.87□□□□□ -1.63
PCDHGA1Q9Y5H4 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PCDHGA1Q9Y5H4 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.87□□□□□ -1.63
PCDHGA1Q9Y5H4 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.87□□□□□ -1.63
PCDHGA1Q9Y5H4 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PCDHGA1Q9Y5H4 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
PCDHGA1Q9Y5H4 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
PCDHGA1Q9Y5H4 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PCDHGA1Q9Y5H4 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PCDHGA1Q9Y5H4 AC099654.2-201ENST00000433031 1980 ntBASIC4.87□□□□□ -1.63
PCDHGA1Q9Y5H4 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.87□□□□□ -1.63
PCDHGA1Q9Y5H4 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.87□□□□□ -1.63
PCDHGA1Q9Y5H4 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.87□□□□□ -1.63
PCDHGA1Q9Y5H4 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PCDHGA1Q9Y5H4 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
PCDHGA1Q9Y5H4 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
PCDHGA1Q9Y5H4 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
PCDHGA1Q9Y5H4 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.86□□□□□ -1.63
PCDHGA1Q9Y5H4 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.86□□□□□ -1.63
PCDHGA1Q9Y5H4 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
PCDHGA1Q9Y5H4 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PCDHGA1Q9Y5H4 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
PCDHGA1Q9Y5H4 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
PCDHGA1Q9Y5H4 AC000123.3-201ENST00000624029 4975 ntBASIC4.86□□□□□ -1.63
PCDHGA1Q9Y5H4 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.86□□□□□ -1.63
PCDHGA1Q9Y5H4 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PCDHGA1Q9Y5H4 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
PCDHGA1Q9Y5H4 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.86□□□□□ -1.63
PCDHGA1Q9Y5H4 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.86□□□□□ -1.63
PCDHGA1Q9Y5H4 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
PCDHGA1Q9Y5H4 RPL32P3-201ENST00000359025 275 ntBASIC4.86□□□□□ -1.63
PCDHGA1Q9Y5H4 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
PCDHGA1Q9Y5H4 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PCDHGA1Q9Y5H4 SNORA70.6-201ENST00000383934 134 ntBASIC4.86□□□□□ -1.63
PCDHGA1Q9Y5H4 MIR589-201ENST00000385238 99 ntBASIC4.86□□□□□ -1.63
PCDHGA1Q9Y5H4 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC4.86□□□□□ -1.63
PCDHGA1Q9Y5H4 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.86□□□□□ -1.63
PCDHGA1Q9Y5H4 RPS27AP7-201ENST00000422792 455 ntBASIC4.86□□□□□ -1.63
PCDHGA1Q9Y5H4 MTND4LP7-201ENST00000431728 294 ntBASIC4.86□□□□□ -1.63
PCDHGA1Q9Y5H4 RPS20P1-201ENST00000434853 354 ntBASIC4.86□□□□□ -1.63
PCDHGA1Q9Y5H4 HMGB3P9-201ENST00000441799 583 ntBASIC4.86□□□□□ -1.63
PCDHGA1Q9Y5H4 RPL36AP15-201ENST00000444514 266 ntBASIC4.86□□□□□ -1.63
PCDHGA1Q9Y5H4 AC012512.1-201ENST00000446594 718 ntBASIC4.86□□□□□ -1.63
PCDHGA1Q9Y5H4 IGHV5-78-201ENST00000450948 295 ntBASIC4.86□□□□□ -1.63
PCDHGA1Q9Y5H4 NIP7P2-201ENST00000485801 544 ntBASIC4.86□□□□□ -1.63
PCDHGA1Q9Y5H4 RPL7P41-201ENST00000485823 957 ntBASIC4.86□□□□□ -1.63
PCDHGA1Q9Y5H4 AC010350.1-201ENST00000504908 231 ntBASIC4.86□□□□□ -1.63
PCDHGA1Q9Y5H4 MRPS33P2-201ENST00000507850 322 ntBASIC4.86□□□□□ -1.63
PCDHGA1Q9Y5H4 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.86□□□□□ -1.63
PCDHGA1Q9Y5H4 RN7SKP92-201ENST00000517266 244 ntBASIC4.86□□□□□ -1.63
PCDHGA1Q9Y5H4 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.86□□□□□ -1.63
PCDHGA1Q9Y5H4 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.86□□□□□ -1.63
PCDHGA1Q9Y5H4 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.86□□□□□ -1.63
PCDHGA1Q9Y5H4 AC079064.1-201ENST00000528365 362 ntBASIC4.86□□□□□ -1.63
PCDHGA1Q9Y5H4 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.86□□□□□ -1.63
PCDHGA1Q9Y5H4 AC074050.1-201ENST00000563247 211 ntBASIC4.86□□□□□ -1.63
PCDHGA1Q9Y5H4 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.86□□□□□ -1.63
PCDHGA1Q9Y5H4 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.86□□□□□ -1.63
PCDHGA1Q9Y5H4 MIR7853-201ENST00000584820 132 ntBASIC4.86□□□□□ -1.63
PCDHGA1Q9Y5H4 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC4.86□□□□□ -1.63
PCDHGA1Q9Y5H4 MIR6758-201ENST00000620653 63 ntBASIC4.86□□□□□ -1.63
PCDHGA1Q9Y5H4 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.86□□□□□ -1.63
PCDHGA1Q9Y5H4 MAPK10-304ENST00000641341 3984 ntBASIC4.86□□□□□ -1.63
PCDHGA1Q9Y5H4 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
PCDHGA1Q9Y5H4 AC009501.3-201ENST00000605001 1352 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 134.2 ms