Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 HIGD1AP15-201ENST00000416198 280 ntBASIC5.72□□□□□ -1.49
COL20A1Q9P218 AC004074.1-201ENST00000421810 1063 ntBASIC5.72□□□□□ -1.49
COL20A1Q9P218 MRPS21P2-201ENST00000424704 264 ntBASIC5.72□□□□□ -1.49
COL20A1Q9P218 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.72□□□□□ -1.49
COL20A1Q9P218 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.72□□□□□ -1.49
COL20A1Q9P218 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.72□□□□□ -1.49
COL20A1Q9P218 PRPF38AP2-201ENST00000438179 851 ntBASIC5.72□□□□□ -1.49
COL20A1Q9P218 AL592437.1-201ENST00000443781 492 ntBASIC5.72□□□□□ -1.49
COL20A1Q9P218 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC5.72□□□□□ -1.49
COL20A1Q9P218 MRPL35P2-201ENST00000448009 511 ntBASIC5.72□□□□□ -1.49
COL20A1Q9P218 OR51B8P-201ENST00000449892 769 ntBASIC5.72□□□□□ -1.49
COL20A1Q9P218 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.72□□□□□ -1.49
COL20A1Q9P218 AC079203.1-201ENST00000487972 404 ntBASIC5.72□□□□□ -1.49
COL20A1Q9P218 HPRT1P1-201ENST00000509498 657 ntBASIC5.72□□□□□ -1.49
COL20A1Q9P218 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC5.72□□□□□ -1.49
COL20A1Q9P218 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC5.72□□□□□ -1.49
COL20A1Q9P218 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC5.72□□□□□ -1.49
COL20A1Q9P218 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.72□□□□□ -1.49
COL20A1Q9P218 AC008083.2-201ENST00000546707 476 ntBASIC5.72□□□□□ -1.49
COL20A1Q9P218 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.72□□□□□ -1.49
COL20A1Q9P218 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC5.72□□□□□ -1.49
COL20A1Q9P218 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.72□□□□□ -1.49
COL20A1Q9P218 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.72□□□□□ -1.49
COL20A1Q9P218 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.72□□□□□ -1.49
COL20A1Q9P218 AC027104.1-201ENST00000563702 681 ntBASIC5.72□□□□□ -1.49
COL20A1Q9P218 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.72□□□□□ -1.49
COL20A1Q9P218 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.72□□□□□ -1.49
COL20A1Q9P218 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC5.72□□□□□ -1.49
COL20A1Q9P218 AC006963.1-201ENST00000624003 1052 ntBASIC5.72□□□□□ -1.49
COL20A1Q9P218 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
COL20A1Q9P218 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
COL20A1Q9P218 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
COL20A1Q9P218 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
COL20A1Q9P218 AL133268.1-201ENST00000405676 1401 ntBASIC5.72□□□□□ -1.49
COL20A1Q9P218 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
COL20A1Q9P218 SEC63P2-201ENST00000503863 1939 ntBASIC5.72□□□□□ -1.49
COL20A1Q9P218 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.72□□□□□ -1.49
COL20A1Q9P218 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.72□□□□□ -1.49
COL20A1Q9P218 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
COL20A1Q9P218 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
COL20A1Q9P218 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.49
COL20A1Q9P218 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
COL20A1Q9P218 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.49
COL20A1Q9P218 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
COL20A1Q9P218 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC5.71□□□□□ -1.49
COL20A1Q9P218 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
COL20A1Q9P218 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.71□□□□□ -1.5
COL20A1Q9P218 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.71□□□□□ -1.5
COL20A1Q9P218 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
COL20A1Q9P218 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
COL20A1Q9P218 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.71□□□□□ -1.5
COL20A1Q9P218 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
COL20A1Q9P218 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
COL20A1Q9P218 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
COL20A1Q9P218 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
COL20A1Q9P218 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
COL20A1Q9P218 UBE2Q2P1-202ENST00000354771 883 ntBASIC5.71□□□□□ -1.5
COL20A1Q9P218 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
COL20A1Q9P218 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
COL20A1Q9P218 MIR320B1-201ENST00000390209 79 ntBASIC5.71□□□□□ -1.5
COL20A1Q9P218 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
COL20A1Q9P218 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.71□□□□□ -1.5
COL20A1Q9P218 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC5.71□□□□□ -1.5
COL20A1Q9P218 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC5.71□□□□□ -1.5
COL20A1Q9P218 OR51A6P-201ENST00000418680 1004 ntBASIC5.71□□□□□ -1.5
COL20A1Q9P218 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC5.71□□□□□ -1.5
COL20A1Q9P218 XKRYP1-201ENST00000423438 492 ntBASIC5.71□□□□□ -1.5
COL20A1Q9P218 XKRYP2-201ENST00000432915 492 ntBASIC5.71□□□□□ -1.5
COL20A1Q9P218 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.71□□□□□ -1.5
COL20A1Q9P218 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC5.71□□□□□ -1.5
COL20A1Q9P218 AC092170.1-201ENST00000440211 356 ntBASIC5.71□□□□□ -1.5
COL20A1Q9P218 VN1R25P-201ENST00000443385 738 ntBASIC5.71□□□□□ -1.5
COL20A1Q9P218 RPL36AP15-201ENST00000444514 266 ntBASIC5.71□□□□□ -1.5
COL20A1Q9P218 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.71□□□□□ -1.5
COL20A1Q9P218 OR52J1P-201ENST00000450596 932 ntBASIC5.71□□□□□ -1.5
COL20A1Q9P218 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.71□□□□□ -1.5
COL20A1Q9P218 AC092155.2-201ENST00000454675 477 ntBASIC5.71□□□□□ -1.5
COL20A1Q9P218 AC063943.1-201ENST00000465434 453 ntBASIC5.71□□□□□ -1.5
COL20A1Q9P218 AC068587.2-201ENST00000478386 781 ntBASIC5.71□□□□□ -1.5
COL20A1Q9P218 AC023050.1-201ENST00000498198 304 ntBASIC5.71□□□□□ -1.5
COL20A1Q9P218 AC111193.1-201ENST00000504097 155 ntBASIC5.71□□□□□ -1.5
COL20A1Q9P218 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC5.71□□□□□ -1.5
COL20A1Q9P218 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC5.71□□□□□ -1.5
COL20A1Q9P218 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.71□□□□□ -1.5
COL20A1Q9P218 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC5.71□□□□□ -1.5
COL20A1Q9P218 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC5.71□□□□□ -1.5
COL20A1Q9P218 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.71□□□□□ -1.5
COL20A1Q9P218 NDUFS5P6-201ENST00000529136 295 ntBASIC5.71□□□□□ -1.5
COL20A1Q9P218 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC5.71□□□□□ -1.5
COL20A1Q9P218 AC025260.1-201ENST00000548858 430 ntBASIC5.71□□□□□ -1.5
COL20A1Q9P218 ATP5F1P7-201ENST00000567330 760 ntBASIC5.71□□□□□ -1.5
COL20A1Q9P218 MTCYBP13-201ENST00000578634 1093 ntBASIC5.71□□□□□ -1.5
COL20A1Q9P218 MIR4737-201ENST00000583979 81 ntBASIC5.71□□□□□ -1.5
COL20A1Q9P218 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.71□□□□□ -1.5
COL20A1Q9P218 uc_338.18-201ENST00000615451 175 ntBASIC5.71□□□□□ -1.5
COL20A1Q9P218 AC138907.10-201ENST00000623708 983 ntBASIC5.71□□□□□ -1.5
COL20A1Q9P218 AC021106.3-201ENST00000623925 531 ntBASIC5.71□□□□□ -1.5
COL20A1Q9P218 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
COL20A1Q9P218 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
COL20A1Q9P218 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms