Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.25□□□□□ -1.73
VAPAQ9P0L0 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.25□□□□□ -1.73
VAPAQ9P0L0 LINC00622-201ENST00000562811 1570 ntBASIC4.25□□□□□ -1.73
VAPAQ9P0L0 AC009117.1-201ENST00000563948 554 ntBASIC4.25□□□□□ -1.73
VAPAQ9P0L0 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.25□□□□□ -1.73
VAPAQ9P0L0 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
VAPAQ9P0L0 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.25□□□□□ -1.73
VAPAQ9P0L0 GMCL1P2-201ENST00000605230 823 ntBASIC4.25□□□□□ -1.73
VAPAQ9P0L0 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC4.25□□□□□ -1.73
VAPAQ9P0L0 AL354950.1-201ENST00000614150 568 ntBASIC4.25□□□□□ -1.73
VAPAQ9P0L0 SNX18P1Y-201ENST00000616231 511 ntBASIC4.25□□□□□ -1.73
VAPAQ9P0L0 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.25□□□□□ -1.73
VAPAQ9P0L0 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.25□□□□□ -1.73
VAPAQ9P0L0 CASC19-222ENST00000641321 1173 ntBASIC4.25□□□□□ -1.73
VAPAQ9P0L0 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.25□□□□□ -1.73
VAPAQ9P0L0 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
VAPAQ9P0L0 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
VAPAQ9P0L0 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
VAPAQ9P0L0 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.24□□□□□ -1.73
VAPAQ9P0L0 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
VAPAQ9P0L0 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.24□□□□□ -1.73
VAPAQ9P0L0 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.24□□□□□ -1.73
VAPAQ9P0L0 SNORA74C-2-201ENST00000411179 201 ntBASIC4.24□□□□□ -1.73
VAPAQ9P0L0 BX510359.2-201ENST00000417920 305 ntBASIC4.24□□□□□ -1.73
VAPAQ9P0L0 AC073335.1-201ENST00000427776 363 ntBASIC4.24□□□□□ -1.73
VAPAQ9P0L0 RPEP2-201ENST00000432149 701 ntBASIC4.24□□□□□ -1.73
VAPAQ9P0L0 RPL7P33-201ENST00000444159 742 ntBASIC4.24□□□□□ -1.73
VAPAQ9P0L0 AL035551.1-201ENST00000446931 348 ntBASIC4.24□□□□□ -1.73
VAPAQ9P0L0 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.24□□□□□ -1.73
VAPAQ9P0L0 AC079804.1-201ENST00000461922 436 ntBASIC4.24□□□□□ -1.73
VAPAQ9P0L0 RN7SL809P-201ENST00000482040 297 ntBASIC4.24□□□□□ -1.73
VAPAQ9P0L0 AC004815.1-201ENST00000484185 331 ntBASIC4.24□□□□□ -1.73
VAPAQ9P0L0 MTND4LP2-201ENST00000502312 285 ntBASIC4.24□□□□□ -1.73
VAPAQ9P0L0 PPM1AP1-201ENST00000502740 1135 ntBASIC4.24□□□□□ -1.73
VAPAQ9P0L0 NDUFB4P12-201ENST00000513465 390 ntBASIC4.24□□□□□ -1.73
VAPAQ9P0L0 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
VAPAQ9P0L0 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.24□□□□□ -1.73
VAPAQ9P0L0 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC4.24□□□□□ -1.73
VAPAQ9P0L0 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
VAPAQ9P0L0 RPL23AP97-201ENST00000568955 471 ntBASIC4.24□□□□□ -1.73
VAPAQ9P0L0 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.24□□□□□ -1.73
VAPAQ9P0L0 AL356274.1-201ENST00000617064 410 ntBASIC4.24□□□□□ -1.73
VAPAQ9P0L0 AC009237.17-201ENST00000618111 748 ntBASIC4.24□□□□□ -1.73
VAPAQ9P0L0 MIR6853-201ENST00000619642 74 ntBASIC4.24□□□□□ -1.73
VAPAQ9P0L0 AC021106.3-201ENST00000623925 531 ntBASIC4.24□□□□□ -1.73
VAPAQ9P0L0 AC007546.2-201ENST00000623996 360 ntBASIC4.24□□□□□ -1.73
VAPAQ9P0L0 BMS1P21-201ENST00000634565 365 ntBASIC4.24□□□□□ -1.73
VAPAQ9P0L0 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
VAPAQ9P0L0 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
VAPAQ9P0L0 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
VAPAQ9P0L0 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
VAPAQ9P0L0 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
VAPAQ9P0L0 ZNF137P-201ENST00000456718 1920 ntBASIC4.24□□□□□ -1.73
VAPAQ9P0L0 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.24□□□□□ -1.73
VAPAQ9P0L0 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.24□□□□□ -1.73
VAPAQ9P0L0 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.24□□□□□ -1.73
VAPAQ9P0L0 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
VAPAQ9P0L0 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
VAPAQ9P0L0 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
VAPAQ9P0L0 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
VAPAQ9P0L0 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
VAPAQ9P0L0 AC108467.2-201ENST00000617640 1597 ntBASIC4.23□□□□□ -1.73
VAPAQ9P0L0 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
VAPAQ9P0L0 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VAPAQ9P0L0 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VAPAQ9P0L0 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.23□□□□□ -1.73
VAPAQ9P0L0 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.23□□□□□ -1.73
VAPAQ9P0L0 RNU1-15P-201ENST00000353977 144 ntBASIC4.23□□□□□ -1.73
VAPAQ9P0L0 RNA5SP52-201ENST00000362448 134 ntBASIC4.23□□□□□ -1.73
VAPAQ9P0L0 RNU6-984P-201ENST00000363236 109 ntBASIC4.23□□□□□ -1.73
VAPAQ9P0L0 RNU6-697P-201ENST00000363348 107 ntBASIC4.23□□□□□ -1.73
VAPAQ9P0L0 SNORA51.8-201ENST00000384234 132 ntBASIC4.23□□□□□ -1.73
VAPAQ9P0L0 LAP3P1-201ENST00000403648 294 ntBASIC4.23□□□□□ -1.73
VAPAQ9P0L0 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.23□□□□□ -1.73
VAPAQ9P0L0 SNORA11.5-201ENST00000408163 128 ntBASIC4.23□□□□□ -1.73
VAPAQ9P0L0 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.23□□□□□ -1.73
VAPAQ9P0L0 OR2X1P-201ENST00000421144 687 ntBASIC4.23□□□□□ -1.73
VAPAQ9P0L0 SUMO2P1-206ENST00000445436 284 ntBASIC4.23□□□□□ -1.73
VAPAQ9P0L0 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.23□□□□□ -1.73
VAPAQ9P0L0 RPL7P16-201ENST00000479738 738 ntBASIC4.23□□□□□ -1.73
VAPAQ9P0L0 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.23□□□□□ -1.73
VAPAQ9P0L0 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.23□□□□□ -1.73
VAPAQ9P0L0 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.23□□□□□ -1.73
VAPAQ9P0L0 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC4.23□□□□□ -1.73
VAPAQ9P0L0 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
VAPAQ9P0L0 AC005000.1-201ENST00000536192 288 ntBASIC4.23□□□□□ -1.73
VAPAQ9P0L0 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.23□□□□□ -1.73
VAPAQ9P0L0 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
VAPAQ9P0L0 AC124068.1-201ENST00000563131 678 ntBASIC4.23□□□□□ -1.73
VAPAQ9P0L0 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.23□□□□□ -1.73
VAPAQ9P0L0 MIR4310-201ENST00000582950 57 ntBASIC4.23□□□□□ -1.73
VAPAQ9P0L0 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC4.23□□□□□ -1.73
VAPAQ9P0L0 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.23□□□□□ -1.73
VAPAQ9P0L0 AL512782.1-201ENST00000603093 364 ntBASIC4.23□□□□□ -1.73
VAPAQ9P0L0 Z98200.1-201ENST00000607298 470 ntBASIC4.23□□□□□ -1.73
VAPAQ9P0L0 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.23□□□□□ -1.73
VAPAQ9P0L0 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.23□□□□□ -1.73
VAPAQ9P0L0 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VAPAQ9P0L0 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
VAPAQ9P0L0 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 153.5 ms