Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 PDSS1P2-201ENST00000449397 678 ntBASIC7.08□□□□□ -1.28
TRAIPQ9BWF2 RPL23AP64-201ENST00000469465 435 ntBASIC7.08□□□□□ -1.28
TRAIPQ9BWF2 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC7.08□□□□□ -1.28
TRAIPQ9BWF2 ARL2BPP4-201ENST00000506854 471 ntBASIC7.08□□□□□ -1.28
TRAIPQ9BWF2 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC7.08□□□□□ -1.28
TRAIPQ9BWF2 AC010625.1-201ENST00000511296 403 ntBASIC7.08□□□□□ -1.28
TRAIPQ9BWF2 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC7.08□□□□□ -1.28
TRAIPQ9BWF2 AC022790.1-201ENST00000522872 204 ntBASIC7.08□□□□□ -1.28
TRAIPQ9BWF2 AC005363.1-201ENST00000530779 351 ntBASIC7.08□□□□□ -1.28
TRAIPQ9BWF2 AP004247.1-201ENST00000531556 1289 ntBASIC7.08□□□□□ -1.28
TRAIPQ9BWF2 AC022880.1-201ENST00000534017 973 ntBASIC7.08□□□□□ -1.28
TRAIPQ9BWF2 OR6C7P-201ENST00000547875 934 ntBASIC7.08□□□□□ -1.28
TRAIPQ9BWF2 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC7.08□□□□□ -1.28
TRAIPQ9BWF2 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC7.08□□□□□ -1.28
TRAIPQ9BWF2 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC7.08□□□□□ -1.28
TRAIPQ9BWF2 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC7.08□□□□□ -1.28
TRAIPQ9BWF2 AC124068.1-201ENST00000563131 678 ntBASIC7.08□□□□□ -1.28
TRAIPQ9BWF2 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC7.08□□□□□ -1.28
TRAIPQ9BWF2 MIR4716-201ENST00000579628 84 ntBASIC7.08□□□□□ -1.28
TRAIPQ9BWF2 AC067852.5-201ENST00000589299 310 ntBASIC7.08□□□□□ -1.28
TRAIPQ9BWF2 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC7.08□□□□□ -1.28
TRAIPQ9BWF2 SNORA74.4-201ENST00000607595 199 ntBASIC7.08□□□□□ -1.28
TRAIPQ9BWF2 AL122125.1-201ENST00000616999 600 ntBASIC7.08□□□□□ -1.28
TRAIPQ9BWF2 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
TRAIPQ9BWF2 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC7.08□□□□□ -1.28
TRAIPQ9BWF2 AC005618.4-201ENST00000625053 554 ntBASIC7.08□□□□□ -1.28
TRAIPQ9BWF2 AC093591.3-201ENST00000634516 308 ntBASIC7.08□□□□□ -1.28
TRAIPQ9BWF2 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
TRAIPQ9BWF2 SELE-203ENST00000367775 3389 ntTSL 5 BASIC7.08□□□□□ -1.28
TRAIPQ9BWF2 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
TRAIPQ9BWF2 SMG1P6-201ENST00000532337 2930 ntBASIC7.08□□□□□ -1.28
TRAIPQ9BWF2 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
TRAIPQ9BWF2 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
TRAIPQ9BWF2 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC7.08□□□□□ -1.28
TRAIPQ9BWF2 AC025809.2-201ENST00000625085 1802 ntBASIC7.08□□□□□ -1.28
TRAIPQ9BWF2 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
TRAIPQ9BWF2 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
TRAIPQ9BWF2 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
TRAIPQ9BWF2 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC7.07□□□□□ -1.28
TRAIPQ9BWF2 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC7.07□□□□□ -1.28
TRAIPQ9BWF2 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC7.07□□□□□ -1.28
TRAIPQ9BWF2 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
TRAIPQ9BWF2 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC7.07□□□□□ -1.28
TRAIPQ9BWF2 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
TRAIPQ9BWF2 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
TRAIPQ9BWF2 DCAF13P1-201ENST00000495256 1330 ntBASIC7.07□□□□□ -1.28
TRAIPQ9BWF2 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC7.07□□□□□ -1.28
TRAIPQ9BWF2 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
TRAIPQ9BWF2 AC009120.2-204ENST00000621548 2032 ntBASIC7.07□□□□□ -1.28
TRAIPQ9BWF2 OR2M1P-201ENST00000318104 951 ntBASIC7.07□□□□□ -1.28
TRAIPQ9BWF2 U3.28-201ENST00000391249 210 ntBASIC7.07□□□□□ -1.28
TRAIPQ9BWF2 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
TRAIPQ9BWF2 RPL21P108-201ENST00000413857 481 ntBASIC7.07□□□□□ -1.28
TRAIPQ9BWF2 AC073136.2-201ENST00000417282 849 ntBASIC7.07□□□□□ -1.28
TRAIPQ9BWF2 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
TRAIPQ9BWF2 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC7.07□□□□□ -1.28
TRAIPQ9BWF2 SLC44A3-AS1-205ENST00000424505 612 ntBASIC7.07□□□□□ -1.28
TRAIPQ9BWF2 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC7.07□□□□□ -1.28
TRAIPQ9BWF2 AC108479.1-201ENST00000431142 427 ntBASIC7.07□□□□□ -1.28
TRAIPQ9BWF2 PRELID3BP10-201ENST00000431957 584 ntBASIC7.07□□□□□ -1.28
TRAIPQ9BWF2 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC7.07□□□□□ -1.28
TRAIPQ9BWF2 RPS20P1-201ENST00000434853 354 ntBASIC7.07□□□□□ -1.28
TRAIPQ9BWF2 TRIM60P9Y-201ENST00000438459 816 ntBASIC7.07□□□□□ -1.28
TRAIPQ9BWF2 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC7.07□□□□□ -1.28
TRAIPQ9BWF2 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC7.07□□□□□ -1.28
TRAIPQ9BWF2 TRIM60P11Y-201ENST00000445313 801 ntBASIC7.07□□□□□ -1.28
TRAIPQ9BWF2 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
TRAIPQ9BWF2 AL592447.1-201ENST00000447592 540 ntBASIC7.07□□□□□ -1.28
TRAIPQ9BWF2 RNU7-136P-201ENST00000458819 69 ntBASIC7.07□□□□□ -1.28
TRAIPQ9BWF2 AC091564.1-201ENST00000464563 479 ntBASIC7.07□□□□□ -1.28
TRAIPQ9BWF2 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
TRAIPQ9BWF2 GM2AP2-201ENST00000491764 562 ntBASIC7.07□□□□□ -1.28
TRAIPQ9BWF2 TMEM251P1-201ENST00000503717 318 ntBASIC7.07□□□□□ -1.28
TRAIPQ9BWF2 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC7.07□□□□□ -1.28
TRAIPQ9BWF2 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC7.07□□□□□ -1.28
TRAIPQ9BWF2 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC7.07□□□□□ -1.28
TRAIPQ9BWF2 RNA5SP418-201ENST00000515951 117 ntBASIC7.07□□□□□ -1.28
TRAIPQ9BWF2 AP003392.2-201ENST00000527269 208 ntBASIC7.07□□□□□ -1.28
TRAIPQ9BWF2 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC7.07□□□□□ -1.28
TRAIPQ9BWF2 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC7.07□□□□□ -1.28
TRAIPQ9BWF2 ZNF519P3-201ENST00000557158 1032 ntBASIC7.07□□□□□ -1.28
TRAIPQ9BWF2 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC7.07□□□□□ -1.28
TRAIPQ9BWF2 AC007599.1-201ENST00000568688 1174 ntBASIC7.07□□□□□ -1.28
TRAIPQ9BWF2 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC7.07□□□□□ -1.28
TRAIPQ9BWF2 APOC2-205ENST00000592257 444 ntTSL 3 BASIC7.07□□□□□ -1.28
TRAIPQ9BWF2 AL953862.2-201ENST00000603089 820 ntBASIC7.07□□□□□ -1.28
TRAIPQ9BWF2 AL359704.2-201ENST00000604335 521 ntBASIC7.07□□□□□ -1.28
TRAIPQ9BWF2 AC006338.2-201ENST00000616864 791 ntBASIC7.07□□□□□ -1.28
TRAIPQ9BWF2 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
TRAIPQ9BWF2 AP000648.2-201ENST00000624182 404 ntBASIC7.07□□□□□ -1.28
TRAIPQ9BWF2 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC7.07□□□□□ -1.28
TRAIPQ9BWF2 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC7.07□□□□□ -1.28
TRAIPQ9BWF2 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC7.07□□□□□ -1.28
TRAIPQ9BWF2 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC7.07□□□□□ -1.28
TRAIPQ9BWF2 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC7.07□□□□□ -1.28
TRAIPQ9BWF2 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC7.07□□□□□ -1.28
TRAIPQ9BWF2 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
TRAIPQ9BWF2 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
TRAIPQ9BWF2 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
TRAIPQ9BWF2 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms