Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CHMP4CQ96CF2 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CHMP4CQ96CF2 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
CHMP4CQ96CF2 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
CHMP4CQ96CF2 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
CHMP4CQ96CF2 SNORD65C-201ENST00000390962 71 ntBASIC6.27□□□□□ -1.41
CHMP4CQ96CF2 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC6.27□□□□□ -1.41
CHMP4CQ96CF2 AC092638.1-201ENST00000411966 1275 ntBASIC6.27□□□□□ -1.41
CHMP4CQ96CF2 ATP6V1G1P7-201ENST00000415853 349 ntBASIC6.27□□□□□ -1.41
CHMP4CQ96CF2 SLC4A1APP1-201ENST00000419995 602 ntBASIC6.27□□□□□ -1.41
CHMP4CQ96CF2 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC6.27□□□□□ -1.41
CHMP4CQ96CF2 RPL7P29-201ENST00000437151 728 ntBASIC6.27□□□□□ -1.41
CHMP4CQ96CF2 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC6.27□□□□□ -1.41
CHMP4CQ96CF2 RPL6P9-201ENST00000466502 859 ntBASIC6.27□□□□□ -1.41
CHMP4CQ96CF2 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC6.27□□□□□ -1.41
CHMP4CQ96CF2 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC6.27□□□□□ -1.41
CHMP4CQ96CF2 AC006499.3-201ENST00000506077 748 ntBASIC6.27□□□□□ -1.41
CHMP4CQ96CF2 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC6.27□□□□□ -1.41
CHMP4CQ96CF2 RNA5SP303-201ENST00000516192 130 ntBASIC6.27□□□□□ -1.41
CHMP4CQ96CF2 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC6.27□□□□□ -1.41
CHMP4CQ96CF2 AC018442.3-201ENST00000523025 183 ntBASIC6.27□□□□□ -1.41
CHMP4CQ96CF2 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CHMP4CQ96CF2 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC6.27□□□□□ -1.41
CHMP4CQ96CF2 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC6.27□□□□□ -1.41
CHMP4CQ96CF2 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC6.27□□□□□ -1.41
CHMP4CQ96CF2 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC6.27□□□□□ -1.41
CHMP4CQ96CF2 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC6.27□□□□□ -1.41
CHMP4CQ96CF2 AC005377.1-201ENST00000605126 456 ntBASIC6.27□□□□□ -1.41
CHMP4CQ96CF2 MIR6839-201ENST00000620425 113 ntBASIC6.27□□□□□ -1.41
CHMP4CQ96CF2 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC6.27□□□□□ -1.41
CHMP4CQ96CF2 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC6.27□□□□□ -1.41
CHMP4CQ96CF2 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC6.27□□□□□ -1.41
CHMP4CQ96CF2 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CHMP4CQ96CF2 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CHMP4CQ96CF2 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC6.27□□□□□ -1.41
CHMP4CQ96CF2 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
CHMP4CQ96CF2 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CHMP4CQ96CF2 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
CHMP4CQ96CF2 AC073055.1-201ENST00000456901 1621 ntBASIC6.26□□□□□ -1.41
CHMP4CQ96CF2 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CHMP4CQ96CF2 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CHMP4CQ96CF2 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
CHMP4CQ96CF2 RNA5SP183-201ENST00000362452 119 ntBASIC6.26□□□□□ -1.41
CHMP4CQ96CF2 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
CHMP4CQ96CF2 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CHMP4CQ96CF2 RNU1-106P-201ENST00000384382 164 ntBASIC6.26□□□□□ -1.41
CHMP4CQ96CF2 SNORA67-201ENST00000384423 137 ntBASIC6.26□□□□□ -1.41
CHMP4CQ96CF2 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC6.26□□□□□ -1.41
CHMP4CQ96CF2 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC6.26□□□□□ -1.41
CHMP4CQ96CF2 NANOGP5-201ENST00000424456 877 ntBASIC6.26□□□□□ -1.41
CHMP4CQ96CF2 AC108075.1-201ENST00000424692 529 ntBASIC6.26□□□□□ -1.41
CHMP4CQ96CF2 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC6.26□□□□□ -1.41
CHMP4CQ96CF2 NPM1P22-201ENST00000427761 952 ntBASIC6.26□□□□□ -1.41
CHMP4CQ96CF2 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC6.26□□□□□ -1.41
CHMP4CQ96CF2 AL035246.1-201ENST00000433554 1255 ntBASIC6.26□□□□□ -1.41
CHMP4CQ96CF2 AL627308.1-201ENST00000435693 821 ntBASIC6.26□□□□□ -1.41
CHMP4CQ96CF2 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC6.26□□□□□ -1.41
CHMP4CQ96CF2 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC6.26□□□□□ -1.41
CHMP4CQ96CF2 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC6.26□□□□□ -1.41
CHMP4CQ96CF2 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC6.26□□□□□ -1.41
CHMP4CQ96CF2 AC009127.1-201ENST00000467090 155 ntBASIC6.26□□□□□ -1.41
CHMP4CQ96CF2 BX284632.1-201ENST00000478218 541 ntBASIC6.26□□□□□ -1.41
CHMP4CQ96CF2 RN7SL447P-201ENST00000494711 245 ntBASIC6.26□□□□□ -1.41
CHMP4CQ96CF2 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC6.26□□□□□ -1.41
CHMP4CQ96CF2 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.26□□□□□ -1.41
CHMP4CQ96CF2 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC6.26□□□□□ -1.41
CHMP4CQ96CF2 OR10V3P-201ENST00000525712 725 ntBASIC6.26□□□□□ -1.41
CHMP4CQ96CF2 HAUS8P1-201ENST00000549005 542 ntBASIC6.26□□□□□ -1.41
CHMP4CQ96CF2 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC6.26□□□□□ -1.41
CHMP4CQ96CF2 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC6.26□□□□□ -1.41
CHMP4CQ96CF2 AC040958.1-201ENST00000561102 201 ntBASIC6.26□□□□□ -1.41
CHMP4CQ96CF2 AC027455.1-201ENST00000574104 594 ntBASIC6.26□□□□□ -1.41
CHMP4CQ96CF2 MIR4443-201ENST00000585052 53 ntBASIC6.26□□□□□ -1.41
CHMP4CQ96CF2 AC006272.2-201ENST00000594725 163 ntBASIC6.26□□□□□ -1.41
CHMP4CQ96CF2 AP001160.4-201ENST00000596971 382 ntBASIC6.26□□□□□ -1.41
CHMP4CQ96CF2 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC6.26□□□□□ -1.41
CHMP4CQ96CF2 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC6.26□□□□□ -1.41
CHMP4CQ96CF2 AC125494.3-201ENST00000602759 455 ntBASIC6.26□□□□□ -1.41
CHMP4CQ96CF2 AC069307.1-201ENST00000602820 447 ntBASIC6.26□□□□□ -1.41
CHMP4CQ96CF2 PART1_2.1-201ENST00000612397 250 ntBASIC6.26□□□□□ -1.41
CHMP4CQ96CF2 RPSAP73-201ENST00000614820 330 ntBASIC6.26□□□□□ -1.41
CHMP4CQ96CF2 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC6.26□□□□□ -1.41
CHMP4CQ96CF2 AL109659.3-201ENST00000624985 950 ntBASIC6.26□□□□□ -1.41
CHMP4CQ96CF2 PCAT14-202ENST00000627127 3935 ntBASIC6.26□□□□□ -1.41
CHMP4CQ96CF2 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC6.26□□□□□ -1.41
CHMP4CQ96CF2 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CHMP4CQ96CF2 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
CHMP4CQ96CF2 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CHMP4CQ96CF2 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
CHMP4CQ96CF2 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC6.26□□□□□ -1.41
CHMP4CQ96CF2 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CHMP4CQ96CF2 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CHMP4CQ96CF2 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
CHMP4CQ96CF2 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CHMP4CQ96CF2 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CHMP4CQ96CF2 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CHMP4CQ96CF2 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC6.25□□□□□ -1.41
CHMP4CQ96CF2 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CHMP4CQ96CF2 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CHMP4CQ96CF2 AC093311.1-201ENST00000506586 2021 ntBASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms