Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SNED1Q8TER0 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
SNED1Q8TER0 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SNED1Q8TER0 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.43□□□□□ -1.54
SNED1Q8TER0 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.43□□□□□ -1.54
SNED1Q8TER0 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.43□□□□□ -1.54
SNED1Q8TER0 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SNED1Q8TER0 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
SNED1Q8TER0 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.42□□□□□ -1.54
SNED1Q8TER0 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
SNED1Q8TER0 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.42□□□□□ -1.54
SNED1Q8TER0 MIR3065-201ENST00000390137 79 ntBASIC5.42□□□□□ -1.54
SNED1Q8TER0 SNRPFP1-201ENST00000414761 252 ntBASIC5.42□□□□□ -1.54
SNED1Q8TER0 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC5.42□□□□□ -1.54
SNED1Q8TER0 RPL23AP38-201ENST00000423801 469 ntBASIC5.42□□□□□ -1.54
SNED1Q8TER0 RPL21P43-201ENST00000425440 472 ntBASIC5.42□□□□□ -1.54
SNED1Q8TER0 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.42□□□□□ -1.54
SNED1Q8TER0 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC5.42□□□□□ -1.54
SNED1Q8TER0 SDR42E1P3-201ENST00000438345 502 ntBASIC5.42□□□□□ -1.54
SNED1Q8TER0 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SNED1Q8TER0 AC006326.1-201ENST00000445465 787 ntBASIC5.42□□□□□ -1.54
SNED1Q8TER0 RSL24D1P2-201ENST00000445584 366 ntBASIC5.42□□□□□ -1.54
SNED1Q8TER0 AL358232.1-201ENST00000448030 501 ntBASIC5.42□□□□□ -1.54
SNED1Q8TER0 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC5.42□□□□□ -1.54
SNED1Q8TER0 VN1R105P-201ENST00000486595 910 ntBASIC5.42□□□□□ -1.54
SNED1Q8TER0 NPM1P28-201ENST00000492269 840 ntBASIC5.42□□□□□ -1.54
SNED1Q8TER0 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC5.42□□□□□ -1.54
SNED1Q8TER0 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.42□□□□□ -1.54
SNED1Q8TER0 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC5.42□□□□□ -1.54
SNED1Q8TER0 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.42□□□□□ -1.54
SNED1Q8TER0 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.42□□□□□ -1.54
SNED1Q8TER0 BPIFA4P-203ENST00000603168 689 ntBASIC5.42□□□□□ -1.54
SNED1Q8TER0 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
SNED1Q8TER0 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
SNED1Q8TER0 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.42□□□□□ -1.54
SNED1Q8TER0 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SNED1Q8TER0 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.42□□□□□ -1.54
SNED1Q8TER0 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SNED1Q8TER0 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
SNED1Q8TER0 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.42□□□□□ -1.54
SNED1Q8TER0 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SNED1Q8TER0 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
SNED1Q8TER0 AP000473.2-201ENST00000602659 1537 ntBASIC5.42□□□□□ -1.54
SNED1Q8TER0 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SNED1Q8TER0 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.41□□□□□ -1.54
SNED1Q8TER0 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SNED1Q8TER0 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SNED1Q8TER0 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SNED1Q8TER0 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.41□□□□□ -1.54
SNED1Q8TER0 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SNED1Q8TER0 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.41□□□□□ -1.54
SNED1Q8TER0 RNU7-157P-201ENST00000459600 66 ntBASIC5.41□□□□□ -1.54
SNED1Q8TER0 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.41□□□□□ -1.54
SNED1Q8TER0 RNU6-362P-201ENST00000516736 90 ntBASIC5.41□□□□□ -1.54
SNED1Q8TER0 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC5.41□□□□□ -1.54
SNED1Q8TER0 AP001804.2-201ENST00000533932 910 ntBASIC5.41□□□□□ -1.54
SNED1Q8TER0 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC5.41□□□□□ -1.54
SNED1Q8TER0 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SNED1Q8TER0 MIR4433B-201ENST00000581329 102 ntBASIC5.41□□□□□ -1.54
SNED1Q8TER0 AL354984.3-201ENST00000604803 325 ntBASIC5.41□□□□□ -1.54
SNED1Q8TER0 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.41□□□□□ -1.54
SNED1Q8TER0 AC007546.1-201ENST00000619452 559 ntBASIC5.41□□□□□ -1.54
SNED1Q8TER0 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
SNED1Q8TER0 AL161912.2-201ENST00000565707 3007 ntBASIC5.41□□□□□ -1.54
SNED1Q8TER0 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SNED1Q8TER0 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SNED1Q8TER0 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
SNED1Q8TER0 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SNED1Q8TER0 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
SNED1Q8TER0 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
SNED1Q8TER0 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.41□□□□□ -1.54
SNED1Q8TER0 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SNED1Q8TER0 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.41□□□□□ -1.54
SNED1Q8TER0 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
SNED1Q8TER0 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
SNED1Q8TER0 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.41□□□□□ -1.54
SNED1Q8TER0 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.41□□□□□ -1.54
SNED1Q8TER0 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
SNED1Q8TER0 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SNED1Q8TER0 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.4□□□□□ -1.54
SNED1Q8TER0 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.54
SNED1Q8TER0 AP000568.1-201ENST00000282964 442 ntBASIC5.4□□□□□ -1.54
SNED1Q8TER0 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
SNED1Q8TER0 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.4□□□□□ -1.54
SNED1Q8TER0 AC138409.2-202ENST00000507274 458 ntBASIC5.4□□□□□ -1.54
SNED1Q8TER0 RNA5SP49-201ENST00000516450 115 ntBASIC5.4□□□□□ -1.54
SNED1Q8TER0 RNU1-45P-201ENST00000517191 141 ntBASIC5.4□□□□□ -1.54
SNED1Q8TER0 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.4□□□□□ -1.54
SNED1Q8TER0 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC5.4□□□□□ -1.54
SNED1Q8TER0 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SNED1Q8TER0 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
SNED1Q8TER0 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.4□□□□□ -1.54
SNED1Q8TER0 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SNED1Q8TER0 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SNED1Q8TER0 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.4□□□□□ -1.54
SNED1Q8TER0 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SNED1Q8TER0 AL672167.1-204ENST00000641875 3017 ntBASIC5.4□□□□□ -1.54
SNED1Q8TER0 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.4□□□□□ -1.55
SNED1Q8TER0 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.4□□□□□ -1.55
SNED1Q8TER0 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms