Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 AK3P4-201ENST00000504283 583 ntBASIC6.18□□□□□ -1.42
SYNE4Q8N205 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC6.18□□□□□ -1.42
SYNE4Q8N205 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC6.18□□□□□ -1.42
SYNE4Q8N205 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC6.18□□□□□ -1.42
SYNE4Q8N205 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC6.18□□□□□ -1.42
SYNE4Q8N205 AL117351.2-201ENST00000513571 157 ntBASIC6.18□□□□□ -1.42
SYNE4Q8N205 AC026402.1-201ENST00000513642 170 ntBASIC6.18□□□□□ -1.42
SYNE4Q8N205 Y_RNA.688-201ENST00000516565 95 ntBASIC6.18□□□□□ -1.42
SYNE4Q8N205 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.18□□□□□ -1.42
SYNE4Q8N205 OR5M2P-201ENST00000529003 936 ntBASIC6.18□□□□□ -1.42
SYNE4Q8N205 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC6.18□□□□□ -1.42
SYNE4Q8N205 DERA-209ENST00000532964 854 ntTSL 5 BASIC6.18□□□□□ -1.42
SYNE4Q8N205 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC6.18□□□□□ -1.42
SYNE4Q8N205 AC023825.1-201ENST00000566704 1030 ntBASIC6.18□□□□□ -1.42
SYNE4Q8N205 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC6.18□□□□□ -1.42
SYNE4Q8N205 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC6.18□□□□□ -1.42
SYNE4Q8N205 AC022884.2-201ENST00000578535 580 ntBASIC6.18□□□□□ -1.42
SYNE4Q8N205 MIMT1-201ENST00000597105 1050 ntBASIC6.18□□□□□ -1.42
SYNE4Q8N205 AL606834.3-201ENST00000602615 496 ntBASIC6.18□□□□□ -1.42
SYNE4Q8N205 HMGB1P51-201ENST00000605166 638 ntBASIC6.18□□□□□ -1.42
SYNE4Q8N205 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC6.18□□□□□ -1.42
SYNE4Q8N205 AC080013.3-201ENST00000606839 578 ntBASIC6.18□□□□□ -1.42
SYNE4Q8N205 AC007497.1-201ENST00000610421 561 ntBASIC6.18□□□□□ -1.42
SYNE4Q8N205 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC6.18□□□□□ -1.42
SYNE4Q8N205 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
SYNE4Q8N205 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SYNE4Q8N205 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SYNE4Q8N205 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
SYNE4Q8N205 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SYNE4Q8N205 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SYNE4Q8N205 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SYNE4Q8N205 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC6.18□□□□□ -1.42
SYNE4Q8N205 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SYNE4Q8N205 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SYNE4Q8N205 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SYNE4Q8N205 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SYNE4Q8N205 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
SYNE4Q8N205 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC6.17□□□□□ -1.42
SYNE4Q8N205 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC6.17□□□□□ -1.42
SYNE4Q8N205 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SYNE4Q8N205 AC100871.1-201ENST00000507871 1456 ntBASIC6.17□□□□□ -1.42
SYNE4Q8N205 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SYNE4Q8N205 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
SYNE4Q8N205 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SYNE4Q8N205 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
SYNE4Q8N205 CCAT2-201ENST00000630920 1752 ntBASIC6.17□□□□□ -1.42
SYNE4Q8N205 AC004158.1-201ENST00000564508 4319 ntBASIC6.17□□□□□ -1.42
SYNE4Q8N205 MAPK10-263ENST00000641052 4307 ntBASIC6.17□□□□□ -1.42
SYNE4Q8N205 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SYNE4Q8N205 U3.22-201ENST00000391120 215 ntBASIC6.17□□□□□ -1.42
SYNE4Q8N205 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
SYNE4Q8N205 RPL12P9-201ENST00000412942 488 ntBASIC6.17□□□□□ -1.42
SYNE4Q8N205 AC098592.2-201ENST00000413158 265 ntBASIC6.17□□□□□ -1.42
SYNE4Q8N205 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC6.17□□□□□ -1.42
SYNE4Q8N205 VN1R31P-201ENST00000417498 730 ntBASIC6.17□□□□□ -1.42
SYNE4Q8N205 GTF2IP2-201ENST00000424290 697 ntBASIC6.17□□□□□ -1.42
SYNE4Q8N205 NANOGP5-201ENST00000424456 877 ntBASIC6.17□□□□□ -1.42
SYNE4Q8N205 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC6.17□□□□□ -1.42
SYNE4Q8N205 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC6.17□□□□□ -1.42
SYNE4Q8N205 TRIM60P9Y-201ENST00000438459 816 ntBASIC6.17□□□□□ -1.42
SYNE4Q8N205 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SYNE4Q8N205 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC6.17□□□□□ -1.42
SYNE4Q8N205 TRIM60P11Y-201ENST00000445313 801 ntBASIC6.17□□□□□ -1.42
SYNE4Q8N205 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC6.17□□□□□ -1.42
SYNE4Q8N205 RPS17P2-201ENST00000461663 408 ntBASIC6.17□□□□□ -1.42
SYNE4Q8N205 RPL32P14-201ENST00000463196 378 ntBASIC6.17□□□□□ -1.42
SYNE4Q8N205 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC6.17□□□□□ -1.42
SYNE4Q8N205 MTND4P2-201ENST00000507767 1203 ntBASIC6.17□□□□□ -1.42
SYNE4Q8N205 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SYNE4Q8N205 AP001207.2-201ENST00000519490 539 ntBASIC6.17□□□□□ -1.42
SYNE4Q8N205 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC6.17□□□□□ -1.42
SYNE4Q8N205 AC092868.3-201ENST00000560515 784 ntBASIC6.17□□□□□ -1.42
SYNE4Q8N205 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC6.17□□□□□ -1.42
SYNE4Q8N205 MIR4277-201ENST00000578298 84 ntBASIC6.17□□□□□ -1.42
SYNE4Q8N205 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC6.17□□□□□ -1.42
SYNE4Q8N205 BNIP3P22-201ENST00000593399 556 ntBASIC6.17□□□□□ -1.42
SYNE4Q8N205 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC6.17□□□□□ -1.42
SYNE4Q8N205 AL109618.2-201ENST00000605527 211 ntBASIC6.17□□□□□ -1.42
SYNE4Q8N205 AC021755.4-201ENST00000616620 456 ntBASIC6.17□□□□□ -1.42
SYNE4Q8N205 AC006338.2-201ENST00000616864 791 ntBASIC6.17□□□□□ -1.42
SYNE4Q8N205 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC6.17□□□□□ -1.42
SYNE4Q8N205 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SYNE4Q8N205 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SYNE4Q8N205 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SYNE4Q8N205 ECM1P2-201ENST00000503354 1577 ntBASIC6.17□□□□□ -1.42
SYNE4Q8N205 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC6.17□□□□□ -1.42
SYNE4Q8N205 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
SYNE4Q8N205 ALB-214ENST00000509063 1911 ntTSL 5 BASIC6.17□□□□□ -1.42
SYNE4Q8N205 AC004817.4-201ENST00000602396 3625 ntBASIC6.17□□□□□ -1.42
SYNE4Q8N205 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
SYNE4Q8N205 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.17□□□□□ -1.42
SYNE4Q8N205 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SYNE4Q8N205 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.17□□□□□ -1.42
SYNE4Q8N205 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
SYNE4Q8N205 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
SYNE4Q8N205 CNOT6LP1-201ENST00000559681 1462 ntBASIC6.16□□□□□ -1.42
SYNE4Q8N205 AC007159.1-201ENST00000566529 4706 ntBASIC6.16□□□□□ -1.42
SYNE4Q8N205 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.16□□□□□ -1.42
SYNE4Q8N205 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC6.16□□□□□ -1.42
SYNE4Q8N205 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms