Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
HIST1H1AQ02539 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
HIST1H1AQ02539 AC006971.1-201ENST00000407916 4486 ntBASIC3.55□□□□□ -1.84
HIST1H1AQ02539 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HIST1H1AQ02539 HSPD1P14-201ENST00000432666 1618 ntBASIC3.55□□□□□ -1.84
HIST1H1AQ02539 SAMMSON-226ENST00000642089 1582 ntBASIC3.55□□□□□ -1.84
HIST1H1AQ02539 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HIST1H1AQ02539 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
HIST1H1AQ02539 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC3.54□□□□□ -1.84
HIST1H1AQ02539 ARHGAP42P1-201ENST00000507474 1976 ntBASIC3.54□□□□□ -1.84
HIST1H1AQ02539 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.54□□□□□ -1.84
HIST1H1AQ02539 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.54□□□□□ -1.84
HIST1H1AQ02539 BX005019.1-201ENST00000561881 1810 ntBASIC3.54□□□□□ -1.84
HIST1H1AQ02539 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.54□□□□□ -1.84
HIST1H1AQ02539 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HIST1H1AQ02539 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HIST1H1AQ02539 RN7SKP95-201ENST00000362860 303 ntBASIC3.54□□□□□ -1.84
HIST1H1AQ02539 AL589647.1-201ENST00000402485 466 ntBASIC3.54□□□□□ -1.84
HIST1H1AQ02539 RNA5SP39-201ENST00000411245 120 ntBASIC3.54□□□□□ -1.84
HIST1H1AQ02539 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC3.54□□□□□ -1.84
HIST1H1AQ02539 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC3.54□□□□□ -1.84
HIST1H1AQ02539 CYP4F29P-201ENST00000420685 446 ntBASIC3.54□□□□□ -1.84
HIST1H1AQ02539 AL391219.1-201ENST00000422570 483 ntBASIC3.54□□□□□ -1.84
HIST1H1AQ02539 RBMY2QP-201ENST00000429799 1147 ntBASIC3.54□□□□□ -1.84
HIST1H1AQ02539 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.54□□□□□ -1.84
HIST1H1AQ02539 RPL7P28-201ENST00000437739 740 ntBASIC3.54□□□□□ -1.84
HIST1H1AQ02539 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC3.54□□□□□ -1.84
HIST1H1AQ02539 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC3.54□□□□□ -1.84
HIST1H1AQ02539 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC3.54□□□□□ -1.84
HIST1H1AQ02539 CEACAMP7-201ENST00000444105 496 ntBASIC3.54□□□□□ -1.84
HIST1H1AQ02539 RPL7P33-201ENST00000444159 742 ntBASIC3.54□□□□□ -1.84
HIST1H1AQ02539 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.54□□□□□ -1.84
HIST1H1AQ02539 EEF1A1P1-201ENST00000447052 739 ntBASIC3.54□□□□□ -1.84
HIST1H1AQ02539 PSMC1P13-201ENST00000458195 985 ntBASIC3.54□□□□□ -1.84
HIST1H1AQ02539 AC012158.1-204ENST00000483430 465 ntBASIC3.54□□□□□ -1.84
HIST1H1AQ02539 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC3.54□□□□□ -1.84
HIST1H1AQ02539 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.54□□□□□ -1.84
HIST1H1AQ02539 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC3.54□□□□□ -1.84
HIST1H1AQ02539 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC3.54□□□□□ -1.84
HIST1H1AQ02539 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC3.54□□□□□ -1.84
HIST1H1AQ02539 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC3.54□□□□□ -1.84
HIST1H1AQ02539 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC3.54□□□□□ -1.84
HIST1H1AQ02539 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.54□□□□□ -1.84
HIST1H1AQ02539 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.54□□□□□ -1.84
HIST1H1AQ02539 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC3.54□□□□□ -1.84
HIST1H1AQ02539 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC3.54□□□□□ -1.84
HIST1H1AQ02539 AC022726.1-201ENST00000587475 207 ntBASIC3.54□□□□□ -1.84
HIST1H1AQ02539 AC011487.3-201ENST00000593607 453 ntBASIC3.54□□□□□ -1.84
HIST1H1AQ02539 AL135786.2-201ENST00000608422 615 ntBASIC3.54□□□□□ -1.84
HIST1H1AQ02539 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC3.54□□□□□ -1.84
HIST1H1AQ02539 AC007497.1-201ENST00000610421 561 ntBASIC3.54□□□□□ -1.84
HIST1H1AQ02539 CR381572.2-201ENST00000624852 397 ntBASIC3.54□□□□□ -1.84
HIST1H1AQ02539 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
HIST1H1AQ02539 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
HIST1H1AQ02539 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
HIST1H1AQ02539 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC3.54□□□□□ -1.84
HIST1H1AQ02539 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HIST1H1AQ02539 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HIST1H1AQ02539 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HIST1H1AQ02539 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HIST1H1AQ02539 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HIST1H1AQ02539 AL031985.3-201ENST00000565390 2449 ntBASIC3.53□□□□□ -1.84
HIST1H1AQ02539 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HIST1H1AQ02539 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC3.53□□□□□ -1.84
HIST1H1AQ02539 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.53□□□□□ -1.84
HIST1H1AQ02539 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HIST1H1AQ02539 RNA5SP305-201ENST00000362665 119 ntBASIC3.53□□□□□ -1.84
HIST1H1AQ02539 RN7SKP44-201ENST00000363602 316 ntBASIC3.53□□□□□ -1.84
HIST1H1AQ02539 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC3.53□□□□□ -1.84
HIST1H1AQ02539 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HIST1H1AQ02539 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HIST1H1AQ02539 U3.30-201ENST00000391308 210 ntBASIC3.53□□□□□ -1.84
HIST1H1AQ02539 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HIST1H1AQ02539 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HIST1H1AQ02539 ARL4AP5-201ENST00000404372 599 ntBASIC3.53□□□□□ -1.84
HIST1H1AQ02539 IL6-206ENST00000407492 926 ntTSL 3 BASIC3.53□□□□□ -1.84
HIST1H1AQ02539 RN7SKP229-201ENST00000410465 302 ntBASIC3.53□□□□□ -1.84
HIST1H1AQ02539 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC3.53□□□□□ -1.84
HIST1H1AQ02539 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC3.53□□□□□ -1.84
HIST1H1AQ02539 Z74021.1-201ENST00000423610 407 ntBASIC3.53□□□□□ -1.84
HIST1H1AQ02539 DPY19L1P2-201ENST00000426647 915 ntBASIC3.53□□□□□ -1.84
HIST1H1AQ02539 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC3.53□□□□□ -1.84
HIST1H1AQ02539 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC3.53□□□□□ -1.84
HIST1H1AQ02539 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC3.53□□□□□ -1.84
HIST1H1AQ02539 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC3.53□□□□□ -1.84
HIST1H1AQ02539 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.53□□□□□ -1.84
HIST1H1AQ02539 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.53□□□□□ -1.84
HIST1H1AQ02539 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HIST1H1AQ02539 RN7SL629P-201ENST00000489622 285 ntBASIC3.53□□□□□ -1.84
HIST1H1AQ02539 AC025164.1-201ENST00000496249 478 ntBASIC3.53□□□□□ -1.84
HIST1H1AQ02539 AC091868.1-201ENST00000508746 304 ntBASIC3.53□□□□□ -1.84
HIST1H1AQ02539 HNRNPKP5-201ENST00000515300 253 ntBASIC3.53□□□□□ -1.84
HIST1H1AQ02539 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.53□□□□□ -1.84
HIST1H1AQ02539 MORF4L1P3-201ENST00000525966 950 ntBASIC3.53□□□□□ -1.84
HIST1H1AQ02539 APPL2-203ENST00000546731 684 ntTSL 2 BASIC3.53□□□□□ -1.84
HIST1H1AQ02539 HMGN2P6-201ENST00000551091 273 ntBASIC3.53□□□□□ -1.84
HIST1H1AQ02539 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC3.53□□□□□ -1.84
HIST1H1AQ02539 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.53□□□□□ -1.84
HIST1H1AQ02539 AC027455.1-201ENST00000574104 594 ntBASIC3.53□□□□□ -1.84
HIST1H1AQ02539 RN7SL802P-201ENST00000577858 299 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms