Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.48□□□□□ -1.69
CLDN6P56747 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CLDN6P56747 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CLDN6P56747 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.48□□□□□ -1.69
CLDN6P56747 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.48□□□□□ -1.69
CLDN6P56747 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.48□□□□□ -1.69
CLDN6P56747 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC4.48□□□□□ -1.69
CLDN6P56747 SNORD39.2-201ENST00000579995 76 ntBASIC4.48□□□□□ -1.69
CLDN6P56747 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.48□□□□□ -1.69
CLDN6P56747 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC4.48□□□□□ -1.69
CLDN6P56747 AL354950.1-201ENST00000614150 568 ntBASIC4.48□□□□□ -1.69
CLDN6P56747 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.48□□□□□ -1.69
CLDN6P56747 AL035461.2-201ENST00000619201 524 ntBASIC4.48□□□□□ -1.69
CLDN6P56747 AP005019.3-201ENST00000620418 560 ntBASIC4.48□□□□□ -1.69
CLDN6P56747 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.48□□□□□ -1.69
CLDN6P56747 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CLDN6P56747 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CLDN6P56747 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.48□□□□□ -1.69
CLDN6P56747 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CLDN6P56747 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.48□□□□□ -1.69
CLDN6P56747 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
CLDN6P56747 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.48□□□□□ -1.69
CLDN6P56747 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC4.48□□□□□ -1.69
CLDN6P56747 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.48□□□□□ -1.69
CLDN6P56747 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CLDN6P56747 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CLDN6P56747 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
CLDN6P56747 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.47□□□□□ -1.69
CLDN6P56747 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.47□□□□□ -1.69
CLDN6P56747 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CLDN6P56747 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.47□□□□□ -1.69
CLDN6P56747 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
CLDN6P56747 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CLDN6P56747 SNORA71.2-201ENST00000364941 134 ntBASIC4.47□□□□□ -1.69
CLDN6P56747 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CLDN6P56747 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.47□□□□□ -1.69
CLDN6P56747 AL358176.3-201ENST00000420757 454 ntBASIC4.47□□□□□ -1.69
CLDN6P56747 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.47□□□□□ -1.69
CLDN6P56747 RPS29P17-201ENST00000430795 166 ntBASIC4.47□□□□□ -1.69
CLDN6P56747 RPL35AP21-201ENST00000437667 333 ntBASIC4.47□□□□□ -1.69
CLDN6P56747 AL138787.1-202ENST00000437804 898 ntBASIC4.47□□□□□ -1.69
CLDN6P56747 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.47□□□□□ -1.69
CLDN6P56747 EEF1A1P1-201ENST00000447052 739 ntBASIC4.47□□□□□ -1.69
CLDN6P56747 MRPL35P2-201ENST00000448009 511 ntBASIC4.47□□□□□ -1.69
CLDN6P56747 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CLDN6P56747 AC002553.2-201ENST00000453217 340 ntBASIC4.47□□□□□ -1.69
CLDN6P56747 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
CLDN6P56747 RPL5P16-201ENST00000471467 790 ntBASIC4.47□□□□□ -1.69
CLDN6P56747 AC104763.1-201ENST00000475274 360 ntBASIC4.47□□□□□ -1.69
CLDN6P56747 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.47□□□□□ -1.69
CLDN6P56747 AP001960.1-201ENST00000506494 658 ntBASIC4.47□□□□□ -1.69
CLDN6P56747 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.47□□□□□ -1.69
CLDN6P56747 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.47□□□□□ -1.69
CLDN6P56747 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.47□□□□□ -1.69
CLDN6P56747 AC068993.1-201ENST00000546724 589 ntBASIC4.47□□□□□ -1.69
CLDN6P56747 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.47□□□□□ -1.69
CLDN6P56747 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CLDN6P56747 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.47□□□□□ -1.69
CLDN6P56747 AC025884.1-201ENST00000556034 378 ntBASIC4.47□□□□□ -1.69
CLDN6P56747 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC4.47□□□□□ -1.69
CLDN6P56747 MIR3936-201ENST00000584304 110 ntBASIC4.47□□□□□ -1.69
CLDN6P56747 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.47□□□□□ -1.69
CLDN6P56747 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.47□□□□□ -1.69
CLDN6P56747 SNX18P1Y-201ENST00000616231 511 ntBASIC4.47□□□□□ -1.69
CLDN6P56747 AL121890.2-201ENST00000617644 465 ntBASIC4.47□□□□□ -1.69
CLDN6P56747 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CLDN6P56747 AC015813.6-201ENST00000624409 5808 ntBASIC4.47□□□□□ -1.69
CLDN6P56747 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CLDN6P56747 TCP1P3-201ENST00000414406 1498 ntBASIC4.47□□□□□ -1.69
CLDN6P56747 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
CLDN6P56747 AC108467.2-201ENST00000617640 1597 ntBASIC4.47□□□□□ -1.69
CLDN6P56747 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.47□□□□□ -1.69
CLDN6P56747 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CLDN6P56747 ZNF137P-201ENST00000456718 1920 ntBASIC4.46□□□□□ -1.69
CLDN6P56747 THAP12P8-201ENST00000447914 2115 ntBASIC4.46□□□□□ -1.69
CLDN6P56747 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.46□□□□□ -1.69
CLDN6P56747 STX3-208ENST00000641815 3236 ntBASIC4.46□□□□□ -1.69
CLDN6P56747 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
CLDN6P56747 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CLDN6P56747 AC027228.2-201ENST00000567141 2154 ntBASIC4.46□□□□□ -1.7
CLDN6P56747 AC093775.1-201ENST00000624154 1868 ntBASIC4.46□□□□□ -1.7
CLDN6P56747 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CLDN6P56747 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.46□□□□□ -1.7
CLDN6P56747 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CLDN6P56747 OR4K17-201ENST00000315543 1032 ntBASIC4.46□□□□□ -1.7
CLDN6P56747 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CLDN6P56747 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CLDN6P56747 AMZ2P2-201ENST00000406819 1057 ntBASIC4.46□□□□□ -1.7
CLDN6P56747 RN7SKP267-201ENST00000410381 285 ntBASIC4.46□□□□□ -1.7
CLDN6P56747 CEACAMP8-201ENST00000413902 580 ntBASIC4.46□□□□□ -1.7
CLDN6P56747 AC013429.2-201ENST00000418798 781 ntBASIC4.46□□□□□ -1.7
CLDN6P56747 AL356387.2-201ENST00000422272 243 ntBASIC4.46□□□□□ -1.7
CLDN6P56747 AL158073.1-201ENST00000426848 1104 ntBASIC4.46□□□□□ -1.7
CLDN6P56747 NFYAP1-201ENST00000431953 972 ntBASIC4.46□□□□□ -1.7
CLDN6P56747 HMGB3P10-201ENST00000434734 572 ntBASIC4.46□□□□□ -1.7
CLDN6P56747 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC4.46□□□□□ -1.7
CLDN6P56747 YWHAZP2-201ENST00000440317 728 ntBASIC4.46□□□□□ -1.7
CLDN6P56747 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.46□□□□□ -1.7
CLDN6P56747 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.46□□□□□ -1.7
CLDN6P56747 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms