Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.53□□□□□ -1.52
COPAP53621 SRSF1P1-201ENST00000424058 520 ntBASIC5.53□□□□□ -1.52
COPAP53621 AC092634.2-201ENST00000428146 1010 ntBASIC5.53□□□□□ -1.52
COPAP53621 TMEM183AP1-205ENST00000432739 290 ntBASIC5.53□□□□□ -1.52
COPAP53621 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.53□□□□□ -1.52
COPAP53621 AL353597.2-202ENST00000434901 373 ntBASIC5.53□□□□□ -1.52
COPAP53621 NDUFB4P8-201ENST00000435351 367 ntBASIC5.53□□□□□ -1.52
COPAP53621 OR10R1P-201ENST00000441524 1141 ntBASIC5.53□□□□□ -1.52
COPAP53621 AC231760.1-201ENST00000498002 260 ntBASIC5.53□□□□□ -1.52
COPAP53621 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.53□□□□□ -1.52
COPAP53621 AC113420.1-201ENST00000507903 571 ntBASIC5.53□□□□□ -1.52
COPAP53621 AC008837.1-201ENST00000511513 412 ntBASIC5.53□□□□□ -1.52
COPAP53621 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC5.53□□□□□ -1.52
COPAP53621 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC5.53□□□□□ -1.52
COPAP53621 RN7SKP253-201ENST00000516424 309 ntBASIC5.53□□□□□ -1.52
COPAP53621 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.53□□□□□ -1.52
COPAP53621 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.53□□□□□ -1.52
COPAP53621 AP006245.2-201ENST00000522004 300 ntBASIC5.53□□□□□ -1.52
COPAP53621 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.53□□□□□ -1.52
COPAP53621 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.53□□□□□ -1.52
COPAP53621 NDUFS5P6-201ENST00000529136 295 ntBASIC5.53□□□□□ -1.52
COPAP53621 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.53□□□□□ -1.52
COPAP53621 AC139103.1-201ENST00000534696 1030 ntBASIC5.53□□□□□ -1.52
COPAP53621 AC006518.2-201ENST00000542513 940 ntBASIC5.53□□□□□ -1.52
COPAP53621 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC5.53□□□□□ -1.52
COPAP53621 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.53□□□□□ -1.52
COPAP53621 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.53□□□□□ -1.52
COPAP53621 AC027104.1-201ENST00000563702 681 ntBASIC5.53□□□□□ -1.52
COPAP53621 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.53□□□□□ -1.52
COPAP53621 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.53□□□□□ -1.52
COPAP53621 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.53□□□□□ -1.52
COPAP53621 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC5.53□□□□□ -1.52
COPAP53621 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.53□□□□□ -1.52
COPAP53621 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.53□□□□□ -1.52
COPAP53621 AC109583.2-201ENST00000617367 129 ntBASIC5.53□□□□□ -1.52
COPAP53621 AP002505.2-201ENST00000623585 696 ntBASIC5.53□□□□□ -1.52
COPAP53621 AP003497.2-201ENST00000624220 967 ntBASIC5.53□□□□□ -1.52
COPAP53621 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.53□□□□□ -1.52
COPAP53621 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
COPAP53621 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC5.53□□□□□ -1.52
COPAP53621 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COPAP53621 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.53□□□□□ -1.52
COPAP53621 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.53□□□□□ -1.52
COPAP53621 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.53□□□□□ -1.52
COPAP53621 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
COPAP53621 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COPAP53621 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.53□□□□□ -1.52
COPAP53621 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.53□□□□□ -1.52
COPAP53621 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
COPAP53621 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
COPAP53621 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
COPAP53621 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
COPAP53621 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
COPAP53621 SEC63P2-201ENST00000503863 1939 ntBASIC5.52□□□□□ -1.53
COPAP53621 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
COPAP53621 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
COPAP53621 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.52□□□□□ -1.53
COPAP53621 AC068870.1-201ENST00000563737 2455 ntBASIC5.52□□□□□ -1.53
COPAP53621 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
COPAP53621 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
COPAP53621 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
COPAP53621 RPL23P2-201ENST00000320371 421 ntBASIC5.52□□□□□ -1.53
COPAP53621 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC5.52□□□□□ -1.53
COPAP53621 AC093719.1-202ENST00000392735 373 ntBASIC5.52□□□□□ -1.53
COPAP53621 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
COPAP53621 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.52□□□□□ -1.53
COPAP53621 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
COPAP53621 MTND4P3-201ENST00000417829 541 ntBASIC5.52□□□□□ -1.53
COPAP53621 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC5.52□□□□□ -1.53
COPAP53621 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.52□□□□□ -1.53
COPAP53621 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC5.52□□□□□ -1.53
COPAP53621 RPL31P44-201ENST00000447680 377 ntBASIC5.52□□□□□ -1.53
COPAP53621 MRPL35P2-201ENST00000448009 511 ntBASIC5.52□□□□□ -1.53
COPAP53621 OTX2P1-201ENST00000450956 354 ntBASIC5.52□□□□□ -1.53
COPAP53621 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.52□□□□□ -1.53
COPAP53621 OFD1P7Y-201ENST00000454643 1155 ntBASIC5.52□□□□□ -1.53
COPAP53621 PSAT1P4-201ENST00000466500 526 ntBASIC5.52□□□□□ -1.53
COPAP53621 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.52□□□□□ -1.53
COPAP53621 AC004453.1-201ENST00000487895 408 ntBASIC5.52□□□□□ -1.53
COPAP53621 AC079203.1-201ENST00000487972 404 ntBASIC5.52□□□□□ -1.53
COPAP53621 RPL21P131-201ENST00000497298 483 ntBASIC5.52□□□□□ -1.53
COPAP53621 BOLA3P3-201ENST00000505182 232 ntBASIC5.52□□□□□ -1.53
COPAP53621 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC5.52□□□□□ -1.53
COPAP53621 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC5.52□□□□□ -1.53
COPAP53621 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
COPAP53621 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.52□□□□□ -1.53
COPAP53621 OR8I1P-201ENST00000529291 931 ntBASIC5.52□□□□□ -1.53
COPAP53621 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.52□□□□□ -1.53
COPAP53621 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.52□□□□□ -1.53
COPAP53621 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.52□□□□□ -1.53
COPAP53621 OR11J2P-201ENST00000555298 907 ntBASIC5.52□□□□□ -1.53
COPAP53621 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
COPAP53621 AC022884.3-201ENST00000579571 248 ntBASIC5.52□□□□□ -1.53
COPAP53621 H3F3BP2-201ENST00000583907 357 ntBASIC5.52□□□□□ -1.53
COPAP53621 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.52□□□□□ -1.53
COPAP53621 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.52□□□□□ -1.53
COPAP53621 ELOCP35-201ENST00000604289 336 ntBASIC5.52□□□□□ -1.53
COPAP53621 AL121612.2-201ENST00000612261 482 ntBASIC5.52□□□□□ -1.53
COPAP53621 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.52□□□□□ -1.53
COPAP53621 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms