Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC4.4□□□□□ -1.71
GTF2A1P52655 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.4□□□□□ -1.71
GTF2A1P52655 AC069307.1-201ENST00000602820 447 ntBASIC4.4□□□□□ -1.71
GTF2A1P52655 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
GTF2A1P52655 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.4□□□□□ -1.71
GTF2A1P52655 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
GTF2A1P52655 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
GTF2A1P52655 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.4□□□□□ -1.71
GTF2A1P52655 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
GTF2A1P52655 U1.1-201ENST00000384101 164 ntBASIC4.39□□□□□ -1.71
GTF2A1P52655 ARL4AP5-201ENST00000404372 599 ntBASIC4.39□□□□□ -1.71
GTF2A1P52655 NUDT19P3-201ENST00000404698 555 ntBASIC4.39□□□□□ -1.71
GTF2A1P52655 RNU4-34P-201ENST00000410431 124 ntBASIC4.39□□□□□ -1.71
GTF2A1P52655 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
GTF2A1P52655 RPL30P2-201ENST00000414021 291 ntBASIC4.39□□□□□ -1.71
GTF2A1P52655 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.39□□□□□ -1.71
GTF2A1P52655 PTP4A1P5-201ENST00000420305 455 ntBASIC4.39□□□□□ -1.71
GTF2A1P52655 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC4.39□□□□□ -1.71
GTF2A1P52655 AC099336.2-201ENST00000422457 254 ntBASIC4.39□□□□□ -1.71
GTF2A1P52655 IPPKP1-201ENST00000422501 768 ntBASIC4.39□□□□□ -1.71
GTF2A1P52655 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC4.39□□□□□ -1.71
GTF2A1P52655 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.39□□□□□ -1.71
GTF2A1P52655 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
GTF2A1P52655 HMGN1P2-201ENST00000445197 310 ntBASIC4.39□□□□□ -1.71
GTF2A1P52655 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.39□□□□□ -1.71
GTF2A1P52655 AC243772.1-201ENST00000451620 410 ntBASIC4.39□□□□□ -1.71
GTF2A1P52655 AC099560.2-201ENST00000457554 255 ntBASIC4.39□□□□□ -1.71
GTF2A1P52655 RN7SL585P-201ENST00000470538 280 ntBASIC4.39□□□□□ -1.71
GTF2A1P52655 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.39□□□□□ -1.71
GTF2A1P52655 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.39□□□□□ -1.71
GTF2A1P52655 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC4.39□□□□□ -1.71
GTF2A1P52655 AC010342.1-201ENST00000514047 877 ntBASIC4.39□□□□□ -1.71
GTF2A1P52655 RNA5SP73-201ENST00000516744 108 ntBASIC4.39□□□□□ -1.71
GTF2A1P52655 AC022826.1-201ENST00000519383 805 ntBASIC4.39□□□□□ -1.71
GTF2A1P52655 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC4.39□□□□□ -1.71
GTF2A1P52655 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC4.39□□□□□ -1.71
GTF2A1P52655 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.39□□□□□ -1.71
GTF2A1P52655 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC4.39□□□□□ -1.71
GTF2A1P52655 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.39□□□□□ -1.71
GTF2A1P52655 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.39□□□□□ -1.71
GTF2A1P52655 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC4.39□□□□□ -1.71
GTF2A1P52655 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC4.39□□□□□ -1.71
GTF2A1P52655 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.39□□□□□ -1.71
GTF2A1P52655 AC023043.4-201ENST00000612081 449 ntBASIC4.39□□□□□ -1.71
GTF2A1P52655 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.39□□□□□ -1.71
GTF2A1P52655 AC008121.2-201ENST00000614647 523 ntBASIC4.39□□□□□ -1.71
GTF2A1P52655 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
GTF2A1P52655 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.39□□□□□ -1.71
GTF2A1P52655 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC4.39□□□□□ -1.71
GTF2A1P52655 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
GTF2A1P52655 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.39□□□□□ -1.71
GTF2A1P52655 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.39□□□□□ -1.71
GTF2A1P52655 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
GTF2A1P52655 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.39□□□□□ -1.71
GTF2A1P52655 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.39□□□□□ -1.71
GTF2A1P52655 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
GTF2A1P52655 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
GTF2A1P52655 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.39□□□□□ -1.71
GTF2A1P52655 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.38□□□□□ -1.71
GTF2A1P52655 AL445437.1-201ENST00000623157 3087 ntBASIC4.38□□□□□ -1.71
GTF2A1P52655 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.38□□□□□ -1.71
GTF2A1P52655 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
GTF2A1P52655 NCAPGP1-201ENST00000505112 1814 ntBASIC4.38□□□□□ -1.71
GTF2A1P52655 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
GTF2A1P52655 OR11H4-201ENST00000315409 1082 ntBASIC4.38□□□□□ -1.71
GTF2A1P52655 RNA5SP284-201ENST00000384547 118 ntBASIC4.38□□□□□ -1.71
GTF2A1P52655 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.38□□□□□ -1.71
GTF2A1P52655 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
GTF2A1P52655 RPL21P43-201ENST00000425440 472 ntBASIC4.38□□□□□ -1.71
GTF2A1P52655 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
GTF2A1P52655 SCAND3P1-201ENST00000439854 1060 ntBASIC4.38□□□□□ -1.71
GTF2A1P52655 RPS29P9-201ENST00000440360 171 ntBASIC4.38□□□□□ -1.71
GTF2A1P52655 AC245517.2-201ENST00000442890 346 ntBASIC4.38□□□□□ -1.71
GTF2A1P52655 YWHAEP1-201ENST00000453697 763 ntBASIC4.38□□□□□ -1.71
GTF2A1P52655 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC4.38□□□□□ -1.71
GTF2A1P52655 AL049830.2-201ENST00000480072 201 ntBASIC4.38□□□□□ -1.71
GTF2A1P52655 RN7SL547P-201ENST00000490793 290 ntBASIC4.38□□□□□ -1.71
GTF2A1P52655 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.38□□□□□ -1.71
GTF2A1P52655 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.38□□□□□ -1.71
GTF2A1P52655 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC4.38□□□□□ -1.71
GTF2A1P52655 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.38□□□□□ -1.71
GTF2A1P52655 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC4.38□□□□□ -1.71
GTF2A1P52655 AC005363.1-201ENST00000530779 351 ntBASIC4.38□□□□□ -1.71
GTF2A1P52655 OR5D15P-201ENST00000531671 942 ntBASIC4.38□□□□□ -1.71
GTF2A1P52655 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.38□□□□□ -1.71
GTF2A1P52655 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC4.38□□□□□ -1.71
GTF2A1P52655 FKBP1BP1-201ENST00000553366 325 ntBASIC4.38□□□□□ -1.71
GTF2A1P52655 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.38□□□□□ -1.71
GTF2A1P52655 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.38□□□□□ -1.71
GTF2A1P52655 MRO-208ENST00000588444 866 ntTSL 3 BASIC4.38□□□□□ -1.71
GTF2A1P52655 AC022146.1-201ENST00000595307 847 ntBASIC4.38□□□□□ -1.71
GTF2A1P52655 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC4.38□□□□□ -1.71
GTF2A1P52655 AL136964.1-201ENST00000622038 2990 ntBASIC4.38□□□□□ -1.71
GTF2A1P52655 AL359742.1-201ENST00000622497 540 ntBASIC4.38□□□□□ -1.71
GTF2A1P52655 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.38□□□□□ -1.71
GTF2A1P52655 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.38□□□□□ -1.71
GTF2A1P52655 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
GTF2A1P52655 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
GTF2A1P52655 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
GTF2A1P52655 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms