Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 RPS4XP14-201ENST00000493072 781 ntBASIC4.7□□□□□ -1.66
SLC1A1P43005 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SLC1A1P43005 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.7□□□□□ -1.66
SLC1A1P43005 GLRXP2-201ENST00000555594 321 ntBASIC4.7□□□□□ -1.66
SLC1A1P43005 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC4.7□□□□□ -1.66
SLC1A1P43005 MTND6P33-201ENST00000571794 183 ntBASIC4.7□□□□□ -1.66
SLC1A1P43005 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.7□□□□□ -1.66
SLC1A1P43005 MIR3934-201ENST00000579806 107 ntBASIC4.7□□□□□ -1.66
SLC1A1P43005 AL137246.1-201ENST00000607072 977 ntBASIC4.7□□□□□ -1.66
SLC1A1P43005 AL158062.1-201ENST00000619632 745 ntBASIC4.7□□□□□ -1.66
SLC1A1P43005 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC4.7□□□□□ -1.66
SLC1A1P43005 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.7□□□□□ -1.66
SLC1A1P43005 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.7□□□□□ -1.66
SLC1A1P43005 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.7□□□□□ -1.66
SLC1A1P43005 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.7□□□□□ -1.66
SLC1A1P43005 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.7□□□□□ -1.66
SLC1A1P43005 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
SLC1A1P43005 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SLC1A1P43005 AL133243.3-201ENST00000617415 3004 ntBASIC4.7□□□□□ -1.66
SLC1A1P43005 AC131971.1-201ENST00000332881 1482 ntBASIC4.69□□□□□ -1.66
SLC1A1P43005 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SLC1A1P43005 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
SLC1A1P43005 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.69□□□□□ -1.66
SLC1A1P43005 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.69□□□□□ -1.66
SLC1A1P43005 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SLC1A1P43005 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.69□□□□□ -1.66
SLC1A1P43005 MFSD8-242ENST00000641690 4199 ntBASIC4.69□□□□□ -1.66
SLC1A1P43005 AL606537.1-201ENST00000607258 2011 ntBASIC4.69□□□□□ -1.66
SLC1A1P43005 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SLC1A1P43005 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SLC1A1P43005 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SLC1A1P43005 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
SLC1A1P43005 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SLC1A1P43005 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.69□□□□□ -1.66
SLC1A1P43005 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SLC1A1P43005 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
SLC1A1P43005 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
SLC1A1P43005 MIR105-2-201ENST00000385083 81 ntBASIC4.69□□□□□ -1.66
SLC1A1P43005 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.69□□□□□ -1.66
SLC1A1P43005 RNU6-1320P-201ENST00000390838 107 ntBASIC4.69□□□□□ -1.66
SLC1A1P43005 RNU6-1269P-201ENST00000391139 107 ntBASIC4.69□□□□□ -1.66
SLC1A1P43005 RNA5SP397-201ENST00000391323 118 ntBASIC4.69□□□□□ -1.66
SLC1A1P43005 AC073136.2-201ENST00000417282 849 ntBASIC4.69□□□□□ -1.66
SLC1A1P43005 AC073335.1-201ENST00000427776 363 ntBASIC4.69□□□□□ -1.66
SLC1A1P43005 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.69□□□□□ -1.66
SLC1A1P43005 MTND6P18-201ENST00000439477 513 ntBASIC4.69□□□□□ -1.66
SLC1A1P43005 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.69□□□□□ -1.66
SLC1A1P43005 RNU6-599P-201ENST00000459383 107 ntBASIC4.69□□□□□ -1.66
SLC1A1P43005 RNU6-1193P-201ENST00000459461 107 ntBASIC4.69□□□□□ -1.66
SLC1A1P43005 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.69□□□□□ -1.66
SLC1A1P43005 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.69□□□□□ -1.66
SLC1A1P43005 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.69□□□□□ -1.66
SLC1A1P43005 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC4.69□□□□□ -1.66
SLC1A1P43005 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.69□□□□□ -1.66
SLC1A1P43005 BRD9P1-201ENST00000529855 560 ntBASIC4.69□□□□□ -1.66
SLC1A1P43005 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.69□□□□□ -1.66
SLC1A1P43005 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.69□□□□□ -1.66
SLC1A1P43005 DUX4L52-201ENST00000549363 777 ntBASIC4.69□□□□□ -1.66
SLC1A1P43005 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.69□□□□□ -1.66
SLC1A1P43005 RN7SL753P-201ENST00000581238 290 ntBASIC4.69□□□□□ -1.66
SLC1A1P43005 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.69□□□□□ -1.66
SLC1A1P43005 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.69□□□□□ -1.66
SLC1A1P43005 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.69□□□□□ -1.66
SLC1A1P43005 RNU6-368P-201ENST00000620928 107 ntBASIC4.69□□□□□ -1.66
SLC1A1P43005 RNU6-538P-201ENST00000622329 107 ntBASIC4.69□□□□□ -1.66
SLC1A1P43005 LINC01808-202ENST00000641680 1116 ntBASIC4.69□□□□□ -1.66
SLC1A1P43005 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SLC1A1P43005 AC010928.1-201ENST00000592477 1447 ntBASIC4.69□□□□□ -1.66
SLC1A1P43005 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
SLC1A1P43005 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SLC1A1P43005 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.69□□□□□ -1.66
SLC1A1P43005 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SLC1A1P43005 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC4.68□□□□□ -1.66
SLC1A1P43005 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SLC1A1P43005 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.68□□□□□ -1.66
SLC1A1P43005 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
SLC1A1P43005 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SLC1A1P43005 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SLC1A1P43005 RNU6-1263P-201ENST00000384601 106 ntBASIC4.68□□□□□ -1.66
SLC1A1P43005 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.68□□□□□ -1.66
SLC1A1P43005 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.68□□□□□ -1.66
SLC1A1P43005 RPS12P5-201ENST00000423449 371 ntBASIC4.68□□□□□ -1.66
SLC1A1P43005 AC106901.1-201ENST00000425086 698 ntBASIC4.68□□□□□ -1.66
SLC1A1P43005 RPS12P10-201ENST00000427031 377 ntBASIC4.68□□□□□ -1.66
SLC1A1P43005 DYNLL1P7-201ENST00000429273 258 ntBASIC4.68□□□□□ -1.66
SLC1A1P43005 OR6C71P-201ENST00000432580 913 ntBASIC4.68□□□□□ -1.66
SLC1A1P43005 AC008072.1-201ENST00000434254 824 ntBASIC4.68□□□□□ -1.66
SLC1A1P43005 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.68□□□□□ -1.66
SLC1A1P43005 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.68□□□□□ -1.66
SLC1A1P43005 MTND6P32-201ENST00000457611 483 ntBASIC4.68□□□□□ -1.66
SLC1A1P43005 AC018638.3-201ENST00000461273 132 ntBASIC4.68□□□□□ -1.66
SLC1A1P43005 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC4.68□□□□□ -1.66
SLC1A1P43005 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.68□□□□□ -1.66
SLC1A1P43005 PPBPP1-201ENST00000510807 373 ntBASIC4.68□□□□□ -1.66
SLC1A1P43005 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC4.68□□□□□ -1.66
SLC1A1P43005 AP000827.1-201ENST00000527814 258 ntBASIC4.68□□□□□ -1.66
SLC1A1P43005 OR5M2P-201ENST00000529003 936 ntBASIC4.68□□□□□ -1.66
SLC1A1P43005 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.68□□□□□ -1.66
SLC1A1P43005 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.68□□□□□ -1.66
SLC1A1P43005 AC067931.1-201ENST00000624190 671 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms