Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC3.51□□□□□ -1.85
HLA-DMBP28068 MIR4737-201ENST00000583979 81 ntBASIC3.51□□□□□ -1.85
HLA-DMBP28068 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC3.51□□□□□ -1.85
HLA-DMBP28068 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.51□□□□□ -1.85
HLA-DMBP28068 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC3.51□□□□□ -1.85
HLA-DMBP28068 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC3.51□□□□□ -1.85
HLA-DMBP28068 AL161616.1-201ENST00000611867 286 ntBASIC3.51□□□□□ -1.85
HLA-DMBP28068 SNX18P1Y-201ENST00000616231 511 ntBASIC3.51□□□□□ -1.85
HLA-DMBP28068 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC3.51□□□□□ -1.85
HLA-DMBP28068 KPNA2P2-201ENST00000419546 1489 ntBASIC3.51□□□□□ -1.85
HLA-DMBP28068 AC012618.3-205ENST00000637896 1496 ntBASIC3.51□□□□□ -1.85
HLA-DMBP28068 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC3.51□□□□□ -1.85
HLA-DMBP28068 AC107027.3-201ENST00000565095 3473 ntBASIC3.51□□□□□ -1.85
HLA-DMBP28068 AL391684.1-202ENST00000641293 1636 ntBASIC3.51□□□□□ -1.85
HLA-DMBP28068 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HLA-DMBP28068 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HLA-DMBP28068 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HLA-DMBP28068 AC012020.1-201ENST00000624541 1728 ntBASIC3.5□□□□□ -1.85
HLA-DMBP28068 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.5□□□□□ -1.85
HLA-DMBP28068 AP001002.1-201ENST00000625148 1513 ntBASIC3.5□□□□□ -1.85
HLA-DMBP28068 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
HLA-DMBP28068 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DMBP28068 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
HLA-DMBP28068 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
HLA-DMBP28068 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DMBP28068 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
HLA-DMBP28068 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DMBP28068 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
HLA-DMBP28068 CYB5AP4-201ENST00000396692 399 ntBASIC3.5□□□□□ -1.85
HLA-DMBP28068 RN7SKP167-201ENST00000411047 285 ntBASIC3.5□□□□□ -1.85
HLA-DMBP28068 AC004074.1-201ENST00000421810 1063 ntBASIC3.5□□□□□ -1.85
HLA-DMBP28068 PDSS1P1-201ENST00000422953 1114 ntBASIC3.5□□□□□ -1.85
HLA-DMBP28068 AC007559.1-201ENST00000428736 355 ntBASIC3.5□□□□□ -1.85
HLA-DMBP28068 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC3.5□□□□□ -1.85
HLA-DMBP28068 AC097523.2-201ENST00000435551 652 ntBASIC3.5□□□□□ -1.85
HLA-DMBP28068 AL138787.1-202ENST00000437804 898 ntBASIC3.5□□□□□ -1.85
HLA-DMBP28068 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.5□□□□□ -1.85
HLA-DMBP28068 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC3.5□□□□□ -1.85
HLA-DMBP28068 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC3.5□□□□□ -1.85
HLA-DMBP28068 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC3.5□□□□□ -1.85
HLA-DMBP28068 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DMBP28068 AL121877.1-201ENST00000453704 622 ntBASIC3.5□□□□□ -1.85
HLA-DMBP28068 ATP5G1P3-201ENST00000463301 410 ntBASIC3.5□□□□□ -1.85
HLA-DMBP28068 RN7SL205P-201ENST00000490174 284 ntBASIC3.5□□□□□ -1.85
HLA-DMBP28068 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC3.5□□□□□ -1.85
HLA-DMBP28068 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC3.5□□□□□ -1.85
HLA-DMBP28068 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC3.5□□□□□ -1.85
HLA-DMBP28068 AP001804.2-201ENST00000533932 910 ntBASIC3.5□□□□□ -1.85
HLA-DMBP28068 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC3.5□□□□□ -1.85
HLA-DMBP28068 AL121839.1-201ENST00000556233 1185 ntBASIC3.5□□□□□ -1.85
HLA-DMBP28068 HMGB3P26-201ENST00000560051 582 ntBASIC3.5□□□□□ -1.85
HLA-DMBP28068 ATP5J2P6-201ENST00000565203 266 ntBASIC3.5□□□□□ -1.85
HLA-DMBP28068 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DMBP28068 RN7SL652P-201ENST00000577769 300 ntBASIC3.5□□□□□ -1.85
HLA-DMBP28068 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC3.5□□□□□ -1.85
HLA-DMBP28068 AC091042.1-201ENST00000579213 173 ntBASIC3.5□□□□□ -1.85
HLA-DMBP28068 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC3.5□□□□□ -1.85
HLA-DMBP28068 AL512782.1-201ENST00000603093 364 ntBASIC3.5□□□□□ -1.85
HLA-DMBP28068 AC005229.3-201ENST00000603438 323 ntBASIC3.5□□□□□ -1.85
HLA-DMBP28068 RN7SL722P-201ENST00000617780 284 ntBASIC3.5□□□□□ -1.85
HLA-DMBP28068 RN7SL565P-201ENST00000618246 284 ntBASIC3.5□□□□□ -1.85
HLA-DMBP28068 BMS1P21-201ENST00000634565 365 ntBASIC3.5□□□□□ -1.85
HLA-DMBP28068 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DMBP28068 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
HLA-DMBP28068 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DMBP28068 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DMBP28068 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DMBP28068 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DMBP28068 MFSD4BP1-201ENST00000513330 1552 ntBASIC3.5□□□□□ -1.85
HLA-DMBP28068 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.5□□□□□ -1.85
HLA-DMBP28068 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC3.5□□□□□ -1.85
HLA-DMBP28068 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
HLA-DMBP28068 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.49□□□□□ -1.85
HLA-DMBP28068 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC3.49□□□□□ -1.85
HLA-DMBP28068 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.49□□□□□ -1.85
HLA-DMBP28068 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HLA-DMBP28068 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HLA-DMBP28068 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HLA-DMBP28068 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.49□□□□□ -1.85
HLA-DMBP28068 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HLA-DMBP28068 EOGT-210ENST00000615922 1931 ntBASIC3.49□□□□□ -1.85
HLA-DMBP28068 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HLA-DMBP28068 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HLA-DMBP28068 MIR448-201ENST00000362131 111 ntBASIC3.49□□□□□ -1.85
HLA-DMBP28068 RNU1-108P-201ENST00000362556 161 ntBASIC3.49□□□□□ -1.85
HLA-DMBP28068 RNU1-20P-201ENST00000363314 162 ntBASIC3.49□□□□□ -1.85
HLA-DMBP28068 RNA5SP151-201ENST00000365632 117 ntBASIC3.49□□□□□ -1.85
HLA-DMBP28068 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HLA-DMBP28068 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HLA-DMBP28068 RNA5SP113-201ENST00000410486 84 ntBASIC3.49□□□□□ -1.85
HLA-DMBP28068 RNU2-50P-201ENST00000410494 143 ntBASIC3.49□□□□□ -1.85
HLA-DMBP28068 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC3.49□□□□□ -1.85
HLA-DMBP28068 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC3.49□□□□□ -1.85
HLA-DMBP28068 RPA2P2-201ENST00000419698 796 ntBASIC3.49□□□□□ -1.85
HLA-DMBP28068 AC092570.3-201ENST00000420113 693 ntBASIC3.49□□□□□ -1.85
HLA-DMBP28068 MTND4LP12-201ENST00000448237 295 ntBASIC3.49□□□□□ -1.85
HLA-DMBP28068 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC3.49□□□□□ -1.85
HLA-DMBP28068 RPS5P7-201ENST00000456664 608 ntBASIC3.49□□□□□ -1.85
HLA-DMBP28068 AC006967.1-201ENST00000467608 589 ntBASIC3.49□□□□□ -1.85
HLA-DMBP28068 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms