Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC7.48□□□□□ -1.21
TOP2AP11388 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
TOP2AP11388 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC7.47□□□□□ -1.21
TOP2AP11388 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC7.47□□□□□ -1.21
TOP2AP11388 RPL37P1-201ENST00000432310 284 ntBASIC7.47□□□□□ -1.21
TOP2AP11388 GTF3AP5-201ENST00000442645 697 ntBASIC7.47□□□□□ -1.21
TOP2AP11388 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
TOP2AP11388 AC022655.2-201ENST00000577280 318 ntBASIC7.47□□□□□ -1.21
TOP2AP11388 HMGB2P1-201ENST00000591146 634 ntBASIC7.47□□□□□ -1.21
TOP2AP11388 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
TOP2AP11388 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC7.47□□□□□ -1.21
TOP2AP11388 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
TOP2AP11388 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
TOP2AP11388 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
TOP2AP11388 CASC19-261ENST00000641853 1638 ntBASIC7.47□□□□□ -1.21
TOP2AP11388 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
TOP2AP11388 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
TOP2AP11388 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
TOP2AP11388 SNORA62.3-201ENST00000365110 153 ntBASIC7.47□□□□□ -1.21
TOP2AP11388 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC7.47□□□□□ -1.21
TOP2AP11388 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC7.47□□□□□ -1.21
TOP2AP11388 RPL23AP46-201ENST00000438548 490 ntBASIC7.47□□□□□ -1.21
TOP2AP11388 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC7.47□□□□□ -1.21
TOP2AP11388 RPS4XP18-201ENST00000495480 763 ntBASIC7.47□□□□□ -1.21
TOP2AP11388 HMGB3P16-201ENST00000508037 287 ntBASIC7.47□□□□□ -1.21
TOP2AP11388 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
TOP2AP11388 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
TOP2AP11388 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC7.47□□□□□ -1.21
TOP2AP11388 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC7.47□□□□□ -1.21
TOP2AP11388 OR7E10P-201ENST00000526420 991 ntBASIC7.47□□□□□ -1.21
TOP2AP11388 AL352979.3-201ENST00000553515 247 ntBASIC7.47□□□□□ -1.21
TOP2AP11388 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC7.47□□□□□ -1.21
TOP2AP11388 COX6CP4-201ENST00000605798 228 ntBASIC7.47□□□□□ -1.21
TOP2AP11388 MIR6075-201ENST00000620782 95 ntBASIC7.47□□□□□ -1.21
TOP2AP11388 MIR6500-201ENST00000622700 86 ntBASIC7.47□□□□□ -1.21
TOP2AP11388 TTC41P-205ENST00000551270 3963 ntBASIC7.47□□□□□ -1.21
TOP2AP11388 EED-206ENST00000527888 1422 ntTSL 2 BASIC7.47□□□□□ -1.21
TOP2AP11388 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
TOP2AP11388 AC116667.1-201ENST00000604855 2072 ntBASIC7.46□□□□□ -1.21
TOP2AP11388 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
TOP2AP11388 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.22
TOP2AP11388 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC7.46□□□□□ -1.22
TOP2AP11388 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
TOP2AP11388 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
TOP2AP11388 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
TOP2AP11388 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
TOP2AP11388 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
TOP2AP11388 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC7.46□□□□□ -1.22
TOP2AP11388 MIR23A-201ENST00000385245 73 ntBASIC7.46□□□□□ -1.22
TOP2AP11388 RPL7P2-201ENST00000427639 268 ntBASIC7.46□□□□□ -1.22
TOP2AP11388 RNA5SP303-201ENST00000516192 130 ntBASIC7.46□□□□□ -1.22
TOP2AP11388 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC7.46□□□□□ -1.22
TOP2AP11388 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC7.46□□□□□ -1.22
TOP2AP11388 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC7.46□□□□□ -1.22
TOP2AP11388 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC7.46□□□□□ -1.22
TOP2AP11388 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
TOP2AP11388 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC7.46□□□□□ -1.22
TOP2AP11388 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
TOP2AP11388 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
TOP2AP11388 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC7.45□□□□□ -1.22
TOP2AP11388 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
TOP2AP11388 TET1P1-201ENST00000426627 2301 ntBASIC7.45□□□□□ -1.22
TOP2AP11388 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC7.45□□□□□ -1.22
TOP2AP11388 AL672167.1-204ENST00000641875 3017 ntBASIC7.45□□□□□ -1.22
TOP2AP11388 EIF4A1P1-201ENST00000420241 934 ntBASIC7.45□□□□□ -1.22
TOP2AP11388 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC7.45□□□□□ -1.22
TOP2AP11388 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
TOP2AP11388 RPL7L1P8-201ENST00000469911 741 ntBASIC7.45□□□□□ -1.22
TOP2AP11388 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC7.45□□□□□ -1.22
TOP2AP11388 AC006064.5-201ENST00000541782 248 ntBASIC7.45□□□□□ -1.22
TOP2AP11388 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC7.45□□□□□ -1.22
TOP2AP11388 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC7.45□□□□□ -1.22
TOP2AP11388 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC7.45□□□□□ -1.22
TOP2AP11388 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC7.45□□□□□ -1.22
TOP2AP11388 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
TOP2AP11388 AL669831.5-218ENST00000591702 1873 ntBASIC7.45□□□□□ -1.22
TOP2AP11388 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
TOP2AP11388 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
TOP2AP11388 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
TOP2AP11388 PHACTR2P1-201ENST00000605639 1414 ntBASIC7.44□□□□□ -1.22
TOP2AP11388 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
TOP2AP11388 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC7.44□□□□□ -1.22
TOP2AP11388 TCP11X1-202ENST00000622971 1372 ntBASIC7.44□□□□□ -1.22
TOP2AP11388 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
TOP2AP11388 SNORD46.1-201ENST00000364139 104 ntBASIC7.44□□□□□ -1.22
TOP2AP11388 RPS26P4-201ENST00000431743 355 ntBASIC7.44□□□□□ -1.22
TOP2AP11388 AL500522.2-201ENST00000448562 343 ntBASIC7.44□□□□□ -1.22
TOP2AP11388 EIF2S2P5-201ENST00000457635 968 ntBASIC7.44□□□□□ -1.22
TOP2AP11388 RPL23AP37-201ENST00000479658 549 ntBASIC7.44□□□□□ -1.22
TOP2AP11388 AC108145.1-201ENST00000503770 153 ntBASIC7.44□□□□□ -1.22
TOP2AP11388 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC7.44□□□□□ -1.22
TOP2AP11388 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC7.44□□□□□ -1.22
TOP2AP11388 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
TOP2AP11388 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC7.44□□□□□ -1.22
TOP2AP11388 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
TOP2AP11388 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
TOP2AP11388 USP9YP4-201ENST00000424401 1745 ntBASIC7.44□□□□□ -1.22
TOP2AP11388 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
TOP2AP11388 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
TOP2AP11388 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC7.44□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms