Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
COL2A1P02458 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
COL2A1P02458 AC083837.1-201ENST00000565297 2994 ntBASIC5.21□□□□□ -1.58
COL2A1P02458 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
COL2A1P02458 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
COL2A1P02458 AL603750.1-201ENST00000624216 1717 ntBASIC5.21□□□□□ -1.58
COL2A1P02458 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.58
COL2A1P02458 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.21□□□□□ -1.58
COL2A1P02458 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
COL2A1P02458 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
COL2A1P02458 SNORA71.3-201ENST00000362582 128 ntBASIC5.2□□□□□ -1.58
COL2A1P02458 RNU6-525P-201ENST00000363685 104 ntBASIC5.2□□□□□ -1.58
COL2A1P02458 AL583835.1-201ENST00000399570 407 ntBASIC5.2□□□□□ -1.58
COL2A1P02458 NPM1P37-201ENST00000403105 874 ntBASIC5.2□□□□□ -1.58
COL2A1P02458 AL592291.1-201ENST00000403830 352 ntBASIC5.2□□□□□ -1.58
COL2A1P02458 AL139039.2-201ENST00000407436 479 ntBASIC5.2□□□□□ -1.58
COL2A1P02458 ARAFP1-201ENST00000422172 605 ntBASIC5.2□□□□□ -1.58
COL2A1P02458 MTND2P9-201ENST00000422293 931 ntBASIC5.2□□□□□ -1.58
COL2A1P02458 HSFY1P1-201ENST00000423928 1178 ntBASIC5.2□□□□□ -1.58
COL2A1P02458 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
COL2A1P02458 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
COL2A1P02458 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
COL2A1P02458 RPS27AP17-201ENST00000463344 455 ntBASIC5.2□□□□□ -1.58
COL2A1P02458 RPS27AP13-201ENST00000498403 237 ntBASIC5.2□□□□□ -1.58
COL2A1P02458 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC5.2□□□□□ -1.58
COL2A1P02458 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.2□□□□□ -1.58
COL2A1P02458 RNA5SP303-201ENST00000516192 130 ntBASIC5.2□□□□□ -1.58
COL2A1P02458 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.2□□□□□ -1.58
COL2A1P02458 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
COL2A1P02458 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
COL2A1P02458 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.2□□□□□ -1.58
COL2A1P02458 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC5.2□□□□□ -1.58
COL2A1P02458 AC005520.3-201ENST00000602874 370 ntBASIC5.2□□□□□ -1.58
COL2A1P02458 AC024220.1-201ENST00000603675 484 ntBASIC5.2□□□□□ -1.58
COL2A1P02458 AC010201.1-201ENST00000605051 540 ntBASIC5.2□□□□□ -1.58
COL2A1P02458 AC007546.1-201ENST00000619452 559 ntBASIC5.2□□□□□ -1.58
COL2A1P02458 MIR8059-201ENST00000620427 81 ntBASIC5.2□□□□□ -1.58
COL2A1P02458 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
COL2A1P02458 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
COL2A1P02458 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
COL2A1P02458 AC005261.4-201ENST00000600047 1385 ntBASIC5.2□□□□□ -1.58
COL2A1P02458 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.2□□□□□ -1.58
COL2A1P02458 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.2□□□□□ -1.58
COL2A1P02458 AC104260.2-201ENST00000623551 3497 ntBASIC5.2□□□□□ -1.58
COL2A1P02458 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
COL2A1P02458 PAPPA-AS1-201ENST00000445861 2450 ntBASIC5.2□□□□□ -1.58
COL2A1P02458 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
COL2A1P02458 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
COL2A1P02458 RNA5SP307-201ENST00000362863 116 ntBASIC5.2□□□□□ -1.58
COL2A1P02458 SNRPFP1-201ENST00000414761 252 ntBASIC5.2□□□□□ -1.58
COL2A1P02458 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.2□□□□□ -1.58
COL2A1P02458 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC5.2□□□□□ -1.58
COL2A1P02458 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
COL2A1P02458 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
COL2A1P02458 LDHBP3-201ENST00000514909 822 ntBASIC5.2□□□□□ -1.58
COL2A1P02458 RNA5SP497-201ENST00000516081 97 ntBASIC5.2□□□□□ -1.58
COL2A1P02458 AC022784.5-201ENST00000522241 437 ntBASIC5.2□□□□□ -1.58
COL2A1P02458 OR8R1P-201ENST00000543943 764 ntBASIC5.2□□□□□ -1.58
COL2A1P02458 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC5.2□□□□□ -1.58
COL2A1P02458 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC5.2□□□□□ -1.58
COL2A1P02458 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.2□□□□□ -1.58
COL2A1P02458 AC006116.5-201ENST00000591936 559 ntBASIC5.2□□□□□ -1.58
COL2A1P02458 AC010503.3-201ENST00000594355 540 ntBASIC5.2□□□□□ -1.58
COL2A1P02458 AL161756.2-201ENST00000604597 246 ntBASIC5.2□□□□□ -1.58
COL2A1P02458 FAM27D1-201ENST00000612308 341 ntBASIC5.2□□□□□ -1.58
COL2A1P02458 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
COL2A1P02458 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.19□□□□□ -1.58
COL2A1P02458 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
COL2A1P02458 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
COL2A1P02458 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
COL2A1P02458 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
COL2A1P02458 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
COL2A1P02458 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.19□□□□□ -1.58
COL2A1P02458 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
COL2A1P02458 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
COL2A1P02458 AL358178.1-201ENST00000407698 397 ntBASIC5.19□□□□□ -1.58
COL2A1P02458 RAB9AP4-201ENST00000415230 609 ntBASIC5.19□□□□□ -1.58
COL2A1P02458 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
COL2A1P02458 UBE2V1P3-201ENST00000439651 417 ntBASIC5.19□□□□□ -1.58
COL2A1P02458 RPSAP41-201ENST00000439695 860 ntBASIC5.19□□□□□ -1.58
COL2A1P02458 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC5.19□□□□□ -1.58
COL2A1P02458 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.19□□□□□ -1.58
COL2A1P02458 AC090602.1-201ENST00000469695 252 ntBASIC5.19□□□□□ -1.58
COL2A1P02458 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.19□□□□□ -1.58
COL2A1P02458 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.19□□□□□ -1.58
COL2A1P02458 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.19□□□□□ -1.58
COL2A1P02458 MTATP6P25-201ENST00000574491 261 ntBASIC5.19□□□□□ -1.58
COL2A1P02458 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.19□□□□□ -1.58
COL2A1P02458 AL355816.2-201ENST00000610049 647 ntBASIC5.19□□□□□ -1.58
COL2A1P02458 AP003400.2-201ENST00000624036 666 ntBASIC5.19□□□□□ -1.58
COL2A1P02458 AC090506.2-201ENST00000624521 419 ntBASIC5.19□□□□□ -1.58
COL2A1P02458 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
COL2A1P02458 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.18□□□□□ -1.58
COL2A1P02458 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
COL2A1P02458 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL2A1P02458 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.18□□□□□ -1.58
COL2A1P02458 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
COL2A1P02458 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL2A1P02458 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
COL2A1P02458 AP005435.3-201ENST00000531260 3198 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms