Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 MIR6826-201ENST00000617808 98 ntBASIC3.5□□□□□ -1.85
HLA-DQA1P01909 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC3.5□□□□□ -1.85
HLA-DQA1P01909 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DQA1P01909 CASC19-264ENST00000641912 1184 ntBASIC3.5□□□□□ -1.85
HLA-DQA1P01909 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DQA1P01909 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.5□□□□□ -1.85
HLA-DQA1P01909 CARF-208ENST00000428585 2513 ntTSL 2 BASIC3.5□□□□□ -1.85
HLA-DQA1P01909 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
HLA-DQA1P01909 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DQA1P01909 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DQA1P01909 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
HLA-DQA1P01909 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DQA1P01909 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DQA1P01909 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
HLA-DQA1P01909 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DQA1P01909 MTCO1P11-201ENST00000429111 1528 ntBASIC3.49□□□□□ -1.85
HLA-DQA1P01909 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
HLA-DQA1P01909 KARSP3-201ENST00000571212 1504 ntBASIC3.49□□□□□ -1.85
HLA-DQA1P01909 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HLA-DQA1P01909 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HLA-DQA1P01909 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HLA-DQA1P01909 AC235565.1-201ENST00000456962 1325 ntBASIC3.49□□□□□ -1.85
HLA-DQA1P01909 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.49□□□□□ -1.85
HLA-DQA1P01909 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
HLA-DQA1P01909 AC083799.1-201ENST00000366451 910 ntBASIC3.49□□□□□ -1.85
HLA-DQA1P01909 MIR7-1-201ENST00000384871 110 ntBASIC3.49□□□□□ -1.85
HLA-DQA1P01909 RPL31-204ENST00000409038 817 ntTSL 2 BASIC3.49□□□□□ -1.85
HLA-DQA1P01909 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HLA-DQA1P01909 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC3.49□□□□□ -1.85
HLA-DQA1P01909 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.49□□□□□ -1.85
HLA-DQA1P01909 RN7SKP114-201ENST00000410327 279 ntBASIC3.49□□□□□ -1.85
HLA-DQA1P01909 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC3.49□□□□□ -1.85
HLA-DQA1P01909 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC3.49□□□□□ -1.85
HLA-DQA1P01909 AC108075.1-201ENST00000424692 529 ntBASIC3.49□□□□□ -1.85
HLA-DQA1P01909 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC3.49□□□□□ -1.85
HLA-DQA1P01909 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC3.49□□□□□ -1.85
HLA-DQA1P01909 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.49□□□□□ -1.85
HLA-DQA1P01909 ELOCP8-201ENST00000439309 332 ntBASIC3.49□□□□□ -1.85
HLA-DQA1P01909 ARL5AP3-201ENST00000439327 386 ntBASIC3.49□□□□□ -1.85
HLA-DQA1P01909 ELOCP15-201ENST00000442090 332 ntBASIC3.49□□□□□ -1.85
HLA-DQA1P01909 AL035551.1-201ENST00000446931 348 ntBASIC3.49□□□□□ -1.85
HLA-DQA1P01909 AC000111.2-201ENST00000448200 210 ntBASIC3.49□□□□□ -1.85
HLA-DQA1P01909 TCEA1P1-201ENST00000449716 880 ntBASIC3.49□□□□□ -1.85
HLA-DQA1P01909 MORF4L1P4-201ENST00000450245 976 ntBASIC3.49□□□□□ -1.85
HLA-DQA1P01909 IGHV5-78-201ENST00000450948 295 ntBASIC3.49□□□□□ -1.85
HLA-DQA1P01909 AURKAPS1-201ENST00000451805 1212 ntBASIC3.49□□□□□ -1.85
HLA-DQA1P01909 RPL7P6-201ENST00000480903 738 ntBASIC3.49□□□□□ -1.85
HLA-DQA1P01909 UBA52P3-201ENST00000491303 382 ntBASIC3.49□□□□□ -1.85
HLA-DQA1P01909 RPS4XP20-201ENST00000505751 772 ntBASIC3.49□□□□□ -1.85
HLA-DQA1P01909 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC3.49□□□□□ -1.85
HLA-DQA1P01909 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC3.49□□□□□ -1.85
HLA-DQA1P01909 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC3.49□□□□□ -1.85
HLA-DQA1P01909 ATP5LP3-201ENST00000514223 304 ntBASIC3.49□□□□□ -1.85
HLA-DQA1P01909 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
HLA-DQA1P01909 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC3.49□□□□□ -1.85
HLA-DQA1P01909 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC3.49□□□□□ -1.85
HLA-DQA1P01909 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC3.49□□□□□ -1.85
HLA-DQA1P01909 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.49□□□□□ -1.85
HLA-DQA1P01909 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.49□□□□□ -1.85
HLA-DQA1P01909 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC3.49□□□□□ -1.85
HLA-DQA1P01909 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC3.49□□□□□ -1.85
HLA-DQA1P01909 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC3.49□□□□□ -1.85
HLA-DQA1P01909 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.49□□□□□ -1.85
HLA-DQA1P01909 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.49□□□□□ -1.85
HLA-DQA1P01909 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.49□□□□□ -1.85
HLA-DQA1P01909 AC011487.3-201ENST00000593607 453 ntBASIC3.49□□□□□ -1.85
HLA-DQA1P01909 AC245128.3-201ENST00000594721 748 ntBASIC3.49□□□□□ -1.85
HLA-DQA1P01909 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC3.49□□□□□ -1.85
HLA-DQA1P01909 AC069307.1-201ENST00000602820 447 ntBASIC3.49□□□□□ -1.85
HLA-DQA1P01909 AC034236.3-201ENST00000605999 461 ntBASIC3.49□□□□□ -1.85
HLA-DQA1P01909 AC005021.1-201ENST00000608730 355 ntBASIC3.49□□□□□ -1.85
HLA-DQA1P01909 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC3.49□□□□□ -1.85
HLA-DQA1P01909 AC233309.1-201ENST00000619522 751 ntBASIC3.49□□□□□ -1.85
HLA-DQA1P01909 AC020763.5-201ENST00000623298 430 ntBASIC3.49□□□□□ -1.85
HLA-DQA1P01909 AC019080.5-201ENST00000624891 757 ntBASIC3.49□□□□□ -1.85
HLA-DQA1P01909 AC119674.1-220ENST00000641502 1048 ntBASIC3.49□□□□□ -1.85
HLA-DQA1P01909 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC3.49□□□□□ -1.85
HLA-DQA1P01909 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HLA-DQA1P01909 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HLA-DQA1P01909 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
HLA-DQA1P01909 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HLA-DQA1P01909 AC093535.2-201ENST00000624769 2326 ntBASIC3.49□□□□□ -1.85
HLA-DQA1P01909 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HLA-DQA1P01909 AC016588.2-201ENST00000632484 3021 ntBASIC3.49□□□□□ -1.85
HLA-DQA1P01909 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
HLA-DQA1P01909 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC3.48□□□□□ -1.85
HLA-DQA1P01909 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.48□□□□□ -1.85
HLA-DQA1P01909 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HLA-DQA1P01909 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
HLA-DQA1P01909 AC110792.3-201ENST00000595906 1614 ntBASIC3.48□□□□□ -1.85
HLA-DQA1P01909 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HLA-DQA1P01909 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.48□□□□□ -1.85
HLA-DQA1P01909 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC3.48□□□□□ -1.85
HLA-DQA1P01909 SMG1P6-201ENST00000532337 2930 ntBASIC3.48□□□□□ -1.85
HLA-DQA1P01909 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HLA-DQA1P01909 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
HLA-DQA1P01909 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.48□□□□□ -1.85
HLA-DQA1P01909 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.48□□□□□ -1.85
HLA-DQA1P01909 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.48□□□□□ -1.85
HLA-DQA1P01909 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms