Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 TDGF1P1-201ENST00000445734 527 ntBASIC5.04□□□□□ -1.6
CLDN3O15551 ARL2BPP10-201ENST00000446487 531 ntBASIC5.04□□□□□ -1.6
CLDN3O15551 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.04□□□□□ -1.6
CLDN3O15551 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.04□□□□□ -1.6
CLDN3O15551 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.04□□□□□ -1.6
CLDN3O15551 AC093720.1-201ENST00000505681 714 ntBASIC5.04□□□□□ -1.6
CLDN3O15551 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.04□□□□□ -1.6
CLDN3O15551 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC5.04□□□□□ -1.6
CLDN3O15551 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.04□□□□□ -1.6
CLDN3O15551 SULT1C2P2-201ENST00000562517 294 ntBASIC5.04□□□□□ -1.6
CLDN3O15551 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.04□□□□□ -1.6
CLDN3O15551 AP005262.1-201ENST00000582646 997 ntBASIC5.04□□□□□ -1.6
CLDN3O15551 AL136295.6-201ENST00000610486 658 ntBASIC5.04□□□□□ -1.6
CLDN3O15551 AL391597.1-201ENST00000618707 694 ntBASIC5.04□□□□□ -1.6
CLDN3O15551 AP000346.3-201ENST00000622821 210 ntBASIC5.04□□□□□ -1.6
CLDN3O15551 AL359757.1-201ENST00000623176 255 ntBASIC5.04□□□□□ -1.6
CLDN3O15551 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.04□□□□□ -1.6
CLDN3O15551 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.04□□□□□ -1.6
CLDN3O15551 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CLDN3O15551 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.04□□□□□ -1.6
CLDN3O15551 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CLDN3O15551 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLDN3O15551 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CLDN3O15551 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.04□□□□□ -1.6
CLDN3O15551 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.04□□□□□ -1.6
CLDN3O15551 OR14L1P-202ENST00000641545 3009 ntBASIC5.04□□□□□ -1.6
CLDN3O15551 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CLDN3O15551 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CLDN3O15551 AC104260.2-201ENST00000623551 3497 ntBASIC5.03□□□□□ -1.6
CLDN3O15551 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLDN3O15551 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLDN3O15551 PCAT14-202ENST00000627127 3935 ntBASIC5.03□□□□□ -1.6
CLDN3O15551 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.03□□□□□ -1.6
CLDN3O15551 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
CLDN3O15551 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.03□□□□□ -1.6
CLDN3O15551 AC021146.4-201ENST00000309229 279 ntBASIC5.03□□□□□ -1.6
CLDN3O15551 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLDN3O15551 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLDN3O15551 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLDN3O15551 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLDN3O15551 RN7SKP74-201ENST00000362849 309 ntBASIC5.03□□□□□ -1.6
CLDN3O15551 RNU6-618P-201ENST00000363518 112 ntBASIC5.03□□□□□ -1.6
CLDN3O15551 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLDN3O15551 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.03□□□□□ -1.6
CLDN3O15551 SNORD65-201ENST00000391079 73 ntBASIC5.03□□□□□ -1.6
CLDN3O15551 OR1F12-201ENST00000402365 945 ntBASIC5.03□□□□□ -1.6
CLDN3O15551 SETP15-201ENST00000412724 337 ntBASIC5.03□□□□□ -1.6
CLDN3O15551 YWHAZP2-201ENST00000440317 728 ntBASIC5.03□□□□□ -1.6
CLDN3O15551 AL035551.1-201ENST00000446931 348 ntBASIC5.03□□□□□ -1.6
CLDN3O15551 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CLDN3O15551 ISCUP1-201ENST00000454451 448 ntBASIC5.03□□□□□ -1.6
CLDN3O15551 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.03□□□□□ -1.6
CLDN3O15551 OR52A4P-201ENST00000472867 958 ntBASIC5.03□□□□□ -1.6
CLDN3O15551 STRADBP1-201ENST00000478954 1281 ntBASIC5.03□□□□□ -1.6
CLDN3O15551 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.03□□□□□ -1.6
CLDN3O15551 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC5.03□□□□□ -1.6
CLDN3O15551 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CLDN3O15551 ATG10-AS1-201ENST00000504846 648 ntBASIC5.03□□□□□ -1.6
CLDN3O15551 AC111000.3-201ENST00000508057 576 ntBASIC5.03□□□□□ -1.6
CLDN3O15551 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.03□□□□□ -1.6
CLDN3O15551 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.03□□□□□ -1.6
CLDN3O15551 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.03□□□□□ -1.6
CLDN3O15551 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.03□□□□□ -1.6
CLDN3O15551 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.03□□□□□ -1.6
CLDN3O15551 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.03□□□□□ -1.6
CLDN3O15551 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.03□□□□□ -1.6
CLDN3O15551 AP001781.1-201ENST00000530977 207 ntBASIC5.03□□□□□ -1.6
CLDN3O15551 AC087888.1-201ENST00000550884 1254 ntBASIC5.03□□□□□ -1.6
CLDN3O15551 AC069061.3-201ENST00000582254 823 ntBASIC5.03□□□□□ -1.6
CLDN3O15551 AC096553.1-201ENST00000605169 829 ntBASIC5.03□□□□□ -1.6
CLDN3O15551 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.03□□□□□ -1.6
CLDN3O15551 AL391684.1-202ENST00000641293 1636 ntBASIC5.03□□□□□ -1.6
CLDN3O15551 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.03□□□□□ -1.6
CLDN3O15551 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLDN3O15551 Z98755.1-201ENST00000407015 1384 ntBASIC5.03□□□□□ -1.6
CLDN3O15551 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.03□□□□□ -1.6
CLDN3O15551 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.03□□□□□ -1.6
CLDN3O15551 AC108751.5-201ENST00000492880 1336 ntBASIC5.02□□□□□ -1.61
CLDN3O15551 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLDN3O15551 OR56B2P-201ENST00000317102 954 ntBASIC5.02□□□□□ -1.61
CLDN3O15551 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CLDN3O15551 RNU4-23P-201ENST00000362839 140 ntBASIC5.02□□□□□ -1.61
CLDN3O15551 RNA5SP332-201ENST00000391063 115 ntBASIC5.02□□□□□ -1.61
CLDN3O15551 GLULP6-201ENST00000399502 913 ntBASIC5.02□□□□□ -1.61
CLDN3O15551 AC006065.1-201ENST00000422539 802 ntBASIC5.02□□□□□ -1.61
CLDN3O15551 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.02□□□□□ -1.61
CLDN3O15551 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CLDN3O15551 AC093716.1-201ENST00000435923 377 ntBASIC5.02□□□□□ -1.61
CLDN3O15551 AL157884.3-201ENST00000448273 1184 ntBASIC5.02□□□□□ -1.61
CLDN3O15551 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.02□□□□□ -1.61
CLDN3O15551 AC104629.2-201ENST00000468627 598 ntBASIC5.02□□□□□ -1.61
CLDN3O15551 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.02□□□□□ -1.61
CLDN3O15551 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC5.02□□□□□ -1.61
CLDN3O15551 TRIM36-IT1-201ENST00000503723 881 ntBASIC5.02□□□□□ -1.61
CLDN3O15551 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.02□□□□□ -1.61
CLDN3O15551 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.02□□□□□ -1.61
CLDN3O15551 OR8X1P-201ENST00000534542 869 ntBASIC5.02□□□□□ -1.61
CLDN3O15551 SETP1-201ENST00000556014 845 ntBASIC5.02□□□□□ -1.61
CLDN3O15551 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.02□□□□□ -1.61
CLDN3O15551 AC130352.1-201ENST00000602979 661 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms