Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC3.73□□□□□ -1.81
SDCBPO00560 VN1R32P-201ENST00000452234 905 ntBASIC3.73□□□□□ -1.81
SDCBPO00560 RN7SL610P-201ENST00000463845 291 ntBASIC3.73□□□□□ -1.81
SDCBPO00560 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SDCBPO00560 AC006499.6-201ENST00000511169 607 ntBASIC3.73□□□□□ -1.81
SDCBPO00560 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC3.73□□□□□ -1.81
SDCBPO00560 IGKV1-32-201ENST00000519290 311 ntBASIC3.73□□□□□ -1.81
SDCBPO00560 OR5M2P-201ENST00000529003 936 ntBASIC3.73□□□□□ -1.81
SDCBPO00560 AC069240.1-201ENST00000548774 375 ntBASIC3.73□□□□□ -1.81
SDCBPO00560 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.73□□□□□ -1.81
SDCBPO00560 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC3.73□□□□□ -1.81
SDCBPO00560 MIR4270-201ENST00000581799 70 ntBASIC3.73□□□□□ -1.81
SDCBPO00560 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
SDCBPO00560 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC3.73□□□□□ -1.81
SDCBPO00560 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC3.73□□□□□ -1.81
SDCBPO00560 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC3.73□□□□□ -1.81
SDCBPO00560 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC3.73□□□□□ -1.81
SDCBPO00560 AC008638.3-201ENST00000603341 463 ntBASIC3.73□□□□□ -1.81
SDCBPO00560 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC3.73□□□□□ -1.81
SDCBPO00560 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC3.73□□□□□ -1.81
SDCBPO00560 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC3.73□□□□□ -1.81
SDCBPO00560 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC3.73□□□□□ -1.81
SDCBPO00560 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SDCBPO00560 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC3.73□□□□□ -1.81
SDCBPO00560 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.73□□□□□ -1.81
SDCBPO00560 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
SDCBPO00560 OR14L1P-202ENST00000641545 3009 ntBASIC3.73□□□□□ -1.81
SDCBPO00560 KPNA2P2-201ENST00000419546 1489 ntBASIC3.73□□□□□ -1.81
SDCBPO00560 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SDCBPO00560 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SDCBPO00560 LINC00622-201ENST00000562811 1570 ntBASIC3.72□□□□□ -1.81
SDCBPO00560 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC3.72□□□□□ -1.81
SDCBPO00560 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
SDCBPO00560 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
SDCBPO00560 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
SDCBPO00560 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SDCBPO00560 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
SDCBPO00560 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SDCBPO00560 AC018529.3-201ENST00000624212 2254 ntBASIC3.72□□□□□ -1.81
SDCBPO00560 KARSP3-201ENST00000571212 1504 ntBASIC3.72□□□□□ -1.81
SDCBPO00560 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
SDCBPO00560 AC021146.4-201ENST00000309229 279 ntBASIC3.72□□□□□ -1.81
SDCBPO00560 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
SDCBPO00560 RN7SKP103-201ENST00000363848 320 ntBASIC3.72□□□□□ -1.81
SDCBPO00560 RHOT1P2-201ENST00000366423 333 ntBASIC3.72□□□□□ -1.81
SDCBPO00560 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SDCBPO00560 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC3.72□□□□□ -1.81
SDCBPO00560 RNA5SP104-201ENST00000410989 118 ntBASIC3.72□□□□□ -1.81
SDCBPO00560 AC004552.1-201ENST00000419089 348 ntBASIC3.72□□□□□ -1.81
SDCBPO00560 AC234781.4-201ENST00000419384 244 ntBASIC3.72□□□□□ -1.81
SDCBPO00560 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC3.72□□□□□ -1.81
SDCBPO00560 AL590762.4-201ENST00000425885 253 ntBASIC3.72□□□□□ -1.81
SDCBPO00560 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.72□□□□□ -1.81
SDCBPO00560 ARAFP2-201ENST00000440565 559 ntBASIC3.72□□□□□ -1.81
SDCBPO00560 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC3.72□□□□□ -1.81
SDCBPO00560 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC3.72□□□□□ -1.81
SDCBPO00560 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC3.72□□□□□ -1.81
SDCBPO00560 RPS26P3-201ENST00000470205 348 ntBASIC3.72□□□□□ -1.81
SDCBPO00560 RN7SL826P-201ENST00000479724 288 ntBASIC3.72□□□□□ -1.81
SDCBPO00560 AC090543.2-201ENST00000483963 348 ntBASIC3.72□□□□□ -1.81
SDCBPO00560 AC004057.1-201ENST00000485827 348 ntBASIC3.72□□□□□ -1.81
SDCBPO00560 IGLV2-34-201ENST00000490007 283 ntBASIC3.72□□□□□ -1.81
SDCBPO00560 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
SDCBPO00560 AC113430.1-201ENST00000506872 718 ntBASIC3.72□□□□□ -1.81
SDCBPO00560 CDV3-208ENST00000511392 554 ntTSL 5 BASIC3.72□□□□□ -1.81
SDCBPO00560 RNA5SP497-201ENST00000516081 97 ntBASIC3.72□□□□□ -1.81
SDCBPO00560 AC008147.3-201ENST00000548666 354 ntBASIC3.72□□□□□ -1.81
SDCBPO00560 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC3.72□□□□□ -1.81
SDCBPO00560 AC084759.1-201ENST00000561168 290 ntBASIC3.72□□□□□ -1.81
SDCBPO00560 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC3.72□□□□□ -1.81
SDCBPO00560 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC3.72□□□□□ -1.81
SDCBPO00560 FAM25E-202ENST00000608562 189 ntBASIC3.72□□□□□ -1.81
SDCBPO00560 AL158196.1-201ENST00000616786 434 ntBASIC3.72□□□□□ -1.81
SDCBPO00560 AC006065.6-201ENST00000625201 545 ntBASIC3.72□□□□□ -1.81
SDCBPO00560 OR2L1P-202ENST00000641567 1023 ntBASIC3.72□□□□□ -1.81
SDCBPO00560 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SDCBPO00560 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC3.72□□□□□ -1.81
SDCBPO00560 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.72□□□□□ -1.81
SDCBPO00560 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SDCBPO00560 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
SDCBPO00560 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SDCBPO00560 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.72□□□□□ -1.81
SDCBPO00560 CPHL1P-201ENST00000461341 3407 ntBASIC3.72□□□□□ -1.81
SDCBPO00560 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SDCBPO00560 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.71□□□□□ -1.81
SDCBPO00560 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.81
SDCBPO00560 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
SDCBPO00560 AC125257.1-201ENST00000560400 2930 ntBASIC3.71□□□□□ -1.81
SDCBPO00560 ZNF962P-201ENST00000443465 3140 ntBASIC3.71□□□□□ -1.82
SDCBPO00560 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SDCBPO00560 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
SDCBPO00560 AC027228.2-201ENST00000567141 2154 ntBASIC3.71□□□□□ -1.82
SDCBPO00560 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
SDCBPO00560 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
SDCBPO00560 SNORD74.4-201ENST00000364129 80 ntBASIC3.71□□□□□ -1.82
SDCBPO00560 RNA5SP87-201ENST00000384155 118 ntBASIC3.71□□□□□ -1.82
SDCBPO00560 MIR93-201ENST00000385024 80 ntBASIC3.71□□□□□ -1.82
SDCBPO00560 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SDCBPO00560 AL035419.1-201ENST00000397037 564 ntBASIC3.71□□□□□ -1.82
SDCBPO00560 MIR1911-201ENST00000410783 80 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 160.1 ms