Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 RN7SKP124-201ENST00000364730 341 ntBASIC5.32□□□□□ -1.56
HMGB1P1B2RPK0 AL035079.1-201ENST00000405210 287 ntBASIC5.32□□□□□ -1.56
HMGB1P1B2RPK0 AL355379.1-201ENST00000405542 640 ntBASIC5.32□□□□□ -1.56
HMGB1P1B2RPK0 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.32□□□□□ -1.56
HMGB1P1B2RPK0 SLC20A1P1-201ENST00000413906 956 ntBASIC5.32□□□□□ -1.56
HMGB1P1B2RPK0 Z68694.1-201ENST00000413929 841 ntBASIC5.32□□□□□ -1.56
HMGB1P1B2RPK0 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC5.32□□□□□ -1.56
HMGB1P1B2RPK0 VN1R37P-201ENST00000419096 748 ntBASIC5.32□□□□□ -1.56
HMGB1P1B2RPK0 AC009238.2-201ENST00000431026 355 ntBASIC5.32□□□□□ -1.56
HMGB1P1B2RPK0 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.32□□□□□ -1.56
HMGB1P1B2RPK0 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.32□□□□□ -1.56
HMGB1P1B2RPK0 MRPL48P1-201ENST00000445390 636 ntBASIC5.32□□□□□ -1.56
HMGB1P1B2RPK0 AL929288.2-201ENST00000446368 407 ntBASIC5.32□□□□□ -1.56
HMGB1P1B2RPK0 FAR2P1-206ENST00000449736 709 ntBASIC5.32□□□□□ -1.56
HMGB1P1B2RPK0 AL672138.1-201ENST00000450604 1015 ntBASIC5.32□□□□□ -1.56
HMGB1P1B2RPK0 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HMGB1P1B2RPK0 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.32□□□□□ -1.56
HMGB1P1B2RPK0 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC5.32□□□□□ -1.56
HMGB1P1B2RPK0 BX248409.1-201ENST00000455497 255 ntBASIC5.32□□□□□ -1.56
HMGB1P1B2RPK0 RN7SL189P-201ENST00000468631 289 ntBASIC5.32□□□□□ -1.56
HMGB1P1B2RPK0 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HMGB1P1B2RPK0 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.32□□□□□ -1.56
HMGB1P1B2RPK0 RNA5SP249-201ENST00000516127 99 ntBASIC5.32□□□□□ -1.56
HMGB1P1B2RPK0 RN7SKP238-201ENST00000516483 249 ntBASIC5.32□□□□□ -1.56
HMGB1P1B2RPK0 RNU4-60P-201ENST00000517239 135 ntBASIC5.32□□□□□ -1.56
HMGB1P1B2RPK0 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.32□□□□□ -1.56
HMGB1P1B2RPK0 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.32□□□□□ -1.56
HMGB1P1B2RPK0 AC017100.2-201ENST00000584628 355 ntBASIC5.32□□□□□ -1.56
HMGB1P1B2RPK0 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.32□□□□□ -1.56
HMGB1P1B2RPK0 AC073592.7-201ENST00000623659 507 ntBASIC5.32□□□□□ -1.56
HMGB1P1B2RPK0 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.32□□□□□ -1.56
HMGB1P1B2RPK0 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
HMGB1P1B2RPK0 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
HMGB1P1B2RPK0 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
HMGB1P1B2RPK0 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
HMGB1P1B2RPK0 A2MP1-204ENST00000566278 4130 ntBASIC5.32□□□□□ -1.56
HMGB1P1B2RPK0 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.32□□□□□ -1.56
HMGB1P1B2RPK0 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.32□□□□□ -1.56
HMGB1P1B2RPK0 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 AC024341.1-201ENST00000526444 1552 ntBASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 SNORA73.1-201ENST00000363107 205 ntBASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 Y_RNA.209-201ENST00000364156 111 ntBASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 ATG4AP1-201ENST00000416893 538 ntBASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 AC010881.1-201ENST00000433830 235 ntBASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 RPEP4-201ENST00000437636 602 ntBASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 AC074367.1-201ENST00000438685 1125 ntBASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 RPL5P7-201ENST00000444235 813 ntBASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 Z77249.1-201ENST00000444622 1175 ntBASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 RPL6P5-201ENST00000445678 828 ntBASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 GXYLT1P1-201ENST00000446657 490 ntBASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 HMGN2P21-201ENST00000447764 270 ntBASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 AC108161.1-201ENST00000461060 402 ntBASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 AC078857.1-201ENST00000469870 667 ntBASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 RPS4XP6-201ENST00000477670 797 ntBASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 RPL9P15-201ENST00000491096 532 ntBASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 NENFP3-201ENST00000503735 313 ntBASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 AC147055.3-201ENST00000510547 851 ntBASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 MRPS16P1-201ENST00000523462 412 ntBASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 AP001372.3-201ENST00000530510 609 ntTSL 2 BASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 AGGF1P8-201ENST00000562979 1000 ntBASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 DPPA2P4-201ENST00000563717 878 ntBASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 AC092474.3-201ENST00000603022 568 ntBASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 IMMP1LP3-201ENST00000604197 224 ntBASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 AC097505.1-201ENST00000610199 565 ntBASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 MIR6070-201ENST00000613967 103 ntBASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 MIR6732-201ENST00000619365 60 ntBASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.31□□□□□ -1.56
HMGB1P1B2RPK0 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms