Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
SMIM28A0A1B0GU29 PPIAP21-201ENST00000464473 501 ntBASIC4.76□□□□□ -1.65
SMIM28A0A1B0GU29 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
SMIM28A0A1B0GU29 AC108751.2-201ENST00000469993 231 ntBASIC4.76□□□□□ -1.65
SMIM28A0A1B0GU29 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.76□□□□□ -1.65
SMIM28A0A1B0GU29 MORF4L2P1-201ENST00000503761 858 ntBASIC4.76□□□□□ -1.65
SMIM28A0A1B0GU29 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.76□□□□□ -1.65
SMIM28A0A1B0GU29 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.76□□□□□ -1.65
SMIM28A0A1B0GU29 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.76□□□□□ -1.65
SMIM28A0A1B0GU29 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.76□□□□□ -1.65
SMIM28A0A1B0GU29 TRAV8-5-201ENST00000537369 341 ntBASIC4.76□□□□□ -1.65
SMIM28A0A1B0GU29 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.76□□□□□ -1.65
SMIM28A0A1B0GU29 MIR4675-201ENST00000577898 77 ntBASIC4.76□□□□□ -1.65
SMIM28A0A1B0GU29 AC069366.1-201ENST00000583159 838 ntBASIC4.76□□□□□ -1.65
SMIM28A0A1B0GU29 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
SMIM28A0A1B0GU29 AP002360.3-201ENST00000607673 710 ntBASIC4.76□□□□□ -1.65
SMIM28A0A1B0GU29 AC092111.2-201ENST00000611627 1414 ntBASIC4.76□□□□□ -1.65
SMIM28A0A1B0GU29 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.76□□□□□ -1.65
SMIM28A0A1B0GU29 AC234782.5-201ENST00000617723 324 ntBASIC4.76□□□□□ -1.65
SMIM28A0A1B0GU29 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.76□□□□□ -1.65
SMIM28A0A1B0GU29 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
SMIM28A0A1B0GU29 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
SMIM28A0A1B0GU29 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
SMIM28A0A1B0GU29 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SMIM28A0A1B0GU29 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SMIM28A0A1B0GU29 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.76□□□□□ -1.65
SMIM28A0A1B0GU29 MAPK10-286ENST00000641208 8747 ntBASIC4.76□□□□□ -1.65
SMIM28A0A1B0GU29 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.76□□□□□ -1.65
SMIM28A0A1B0GU29 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SMIM28A0A1B0GU29 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.75□□□□□ -1.65
SMIM28A0A1B0GU29 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.75□□□□□ -1.65
SMIM28A0A1B0GU29 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SMIM28A0A1B0GU29 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
SMIM28A0A1B0GU29 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
SMIM28A0A1B0GU29 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.75□□□□□ -1.65
SMIM28A0A1B0GU29 RNU1-132P-201ENST00000364300 164 ntBASIC4.75□□□□□ -1.65
SMIM28A0A1B0GU29 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.75□□□□□ -1.65
SMIM28A0A1B0GU29 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SMIM28A0A1B0GU29 AC062016.2-201ENST00000420950 676 ntBASIC4.75□□□□□ -1.65
SMIM28A0A1B0GU29 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.75□□□□□ -1.65
SMIM28A0A1B0GU29 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.75□□□□□ -1.65
SMIM28A0A1B0GU29 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.75□□□□□ -1.65
SMIM28A0A1B0GU29 ACTR3P2-201ENST00000439585 1257 ntBASIC4.75□□□□□ -1.65
SMIM28A0A1B0GU29 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SMIM28A0A1B0GU29 OR52Y1P-201ENST00000452418 828 ntBASIC4.75□□□□□ -1.65
SMIM28A0A1B0GU29 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SMIM28A0A1B0GU29 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.75□□□□□ -1.65
SMIM28A0A1B0GU29 AC103987.1-201ENST00000473394 348 ntBASIC4.75□□□□□ -1.65
SMIM28A0A1B0GU29 AC091167.1-201ENST00000492017 396 ntBASIC4.75□□□□□ -1.65
SMIM28A0A1B0GU29 ATP1B1P1-201ENST00000509767 915 ntBASIC4.75□□□□□ -1.65
SMIM28A0A1B0GU29 AP000619.2-201ENST00000546014 969 ntBASIC4.75□□□□□ -1.65
SMIM28A0A1B0GU29 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.75□□□□□ -1.65
SMIM28A0A1B0GU29 AC090515.3-201ENST00000560431 315 ntBASIC4.75□□□□□ -1.65
SMIM28A0A1B0GU29 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.75□□□□□ -1.65
SMIM28A0A1B0GU29 AC138473.1-201ENST00000605717 526 ntBASIC4.75□□□□□ -1.65
SMIM28A0A1B0GU29 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.75□□□□□ -1.65
SMIM28A0A1B0GU29 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
SMIM28A0A1B0GU29 AL445567.2-201ENST00000618935 498 ntBASIC4.75□□□□□ -1.65
SMIM28A0A1B0GU29 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SMIM28A0A1B0GU29 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SMIM28A0A1B0GU29 AC138965.3-201ENST00000623875 498 ntBASIC4.75□□□□□ -1.65
SMIM28A0A1B0GU29 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.75□□□□□ -1.65
SMIM28A0A1B0GU29 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.75□□□□□ -1.65
SMIM28A0A1B0GU29 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SMIM28A0A1B0GU29 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.75□□□□□ -1.65
SMIM28A0A1B0GU29 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.75□□□□□ -1.65
SMIM28A0A1B0GU29 AL731566.1-201ENST00000620490 1937 ntBASIC4.75□□□□□ -1.65
SMIM28A0A1B0GU29 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.75□□□□□ -1.65
SMIM28A0A1B0GU29 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
SMIM28A0A1B0GU29 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.75□□□□□ -1.65
SMIM28A0A1B0GU29 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.75□□□□□ -1.65
SMIM28A0A1B0GU29 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
SMIM28A0A1B0GU29 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.74□□□□□ -1.65
SMIM28A0A1B0GU29 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SMIM28A0A1B0GU29 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.74□□□□□ -1.65
SMIM28A0A1B0GU29 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.74□□□□□ -1.65
SMIM28A0A1B0GU29 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SMIM28A0A1B0GU29 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
SMIM28A0A1B0GU29 AC006971.1-201ENST00000407916 4486 ntBASIC4.74□□□□□ -1.65
SMIM28A0A1B0GU29 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SMIM28A0A1B0GU29 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
SMIM28A0A1B0GU29 RNA5SP366-201ENST00000365454 123 ntBASIC4.74□□□□□ -1.65
SMIM28A0A1B0GU29 ST13P16-201ENST00000401760 781 ntBASIC4.74□□□□□ -1.65
SMIM28A0A1B0GU29 RNU2-22P-201ENST00000411266 212 ntBASIC4.74□□□□□ -1.65
SMIM28A0A1B0GU29 RPS20P14-201ENST00000412545 360 ntBASIC4.74□□□□□ -1.65
SMIM28A0A1B0GU29 AC234781.4-201ENST00000419384 244 ntBASIC4.74□□□□□ -1.65
SMIM28A0A1B0GU29 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.74□□□□□ -1.65
SMIM28A0A1B0GU29 RPL23AP25-201ENST00000430973 463 ntBASIC4.74□□□□□ -1.65
SMIM28A0A1B0GU29 UBE2V2P1-201ENST00000434717 398 ntBASIC4.74□□□□□ -1.65
SMIM28A0A1B0GU29 RPL23AP52-201ENST00000439311 478 ntBASIC4.74□□□□□ -1.65
SMIM28A0A1B0GU29 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.74□□□□□ -1.65
SMIM28A0A1B0GU29 RPL7AP52-201ENST00000458096 790 ntBASIC4.74□□□□□ -1.65
SMIM28A0A1B0GU29 AC112206.1-201ENST00000468416 477 ntBASIC4.74□□□□□ -1.65
SMIM28A0A1B0GU29 SEPT7P6-201ENST00000469999 1143 ntBASIC4.74□□□□□ -1.65
SMIM28A0A1B0GU29 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SMIM28A0A1B0GU29 AC041039.1-201ENST00000485656 536 ntBASIC4.74□□□□□ -1.65
SMIM28A0A1B0GU29 RPS4XP18-201ENST00000495480 763 ntBASIC4.74□□□□□ -1.65
SMIM28A0A1B0GU29 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.74□□□□□ -1.65
SMIM28A0A1B0GU29 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.74□□□□□ -1.65
SMIM28A0A1B0GU29 IGBP1P5-201ENST00000507524 1000 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms