Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
SSX2IPQ9Y2D8 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
SSX2IPQ9Y2D8 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
SSX2IPQ9Y2D8 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
SSX2IPQ9Y2D8 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
SSX2IPQ9Y2D8 AP000542.2-201ENST00000623199 6179 ntBASIC5.69□□□□□ -1.5
SSX2IPQ9Y2D8 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SSX2IPQ9Y2D8 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SSX2IPQ9Y2D8 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SSX2IPQ9Y2D8 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SSX2IPQ9Y2D8 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.69□□□□□ -1.5
SSX2IPQ9Y2D8 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
SSX2IPQ9Y2D8 RNU4-4P-201ENST00000364588 130 ntBASIC5.69□□□□□ -1.5
SSX2IPQ9Y2D8 RNU4-28P-201ENST00000364739 141 ntBASIC5.69□□□□□ -1.5
SSX2IPQ9Y2D8 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.69□□□□□ -1.5
SSX2IPQ9Y2D8 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
SSX2IPQ9Y2D8 RNU6-1005P-201ENST00000384519 107 ntBASIC5.69□□□□□ -1.5
SSX2IPQ9Y2D8 AL049545.1-201ENST00000401856 572 ntBASIC5.69□□□□□ -1.5
SSX2IPQ9Y2D8 AL109941.1-201ENST00000401925 229 ntBASIC5.69□□□□□ -1.5
SSX2IPQ9Y2D8 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.69□□□□□ -1.5
SSX2IPQ9Y2D8 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC5.69□□□□□ -1.5
SSX2IPQ9Y2D8 MTCYBP7-201ENST00000419540 1134 ntBASIC5.69□□□□□ -1.5
SSX2IPQ9Y2D8 MTCYBP29-201ENST00000436327 1006 ntBASIC5.69□□□□□ -1.5
SSX2IPQ9Y2D8 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.69□□□□□ -1.5
SSX2IPQ9Y2D8 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.69□□□□□ -1.5
SSX2IPQ9Y2D8 CR769776.1-201ENST00000441254 787 ntBASIC5.69□□□□□ -1.5
SSX2IPQ9Y2D8 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.69□□□□□ -1.5
SSX2IPQ9Y2D8 AL157827.1-201ENST00000447622 132 ntBASIC5.69□□□□□ -1.5
SSX2IPQ9Y2D8 HIGD1AP8-201ENST00000453927 274 ntBASIC5.69□□□□□ -1.5
SSX2IPQ9Y2D8 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.69□□□□□ -1.5
SSX2IPQ9Y2D8 AC009127.1-201ENST00000467090 155 ntBASIC5.69□□□□□ -1.5
SSX2IPQ9Y2D8 MTCO3P35-201ENST00000485582 781 ntBASIC5.69□□□□□ -1.5
SSX2IPQ9Y2D8 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC5.69□□□□□ -1.5
SSX2IPQ9Y2D8 RPL21P131-201ENST00000497298 483 ntBASIC5.69□□□□□ -1.5
SSX2IPQ9Y2D8 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.69□□□□□ -1.5
SSX2IPQ9Y2D8 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.69□□□□□ -1.5
SSX2IPQ9Y2D8 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SSX2IPQ9Y2D8 GAPDHP62-201ENST00000515313 990 ntBASIC5.69□□□□□ -1.5
SSX2IPQ9Y2D8 RN7SKP141-201ENST00000516167 338 ntBASIC5.69□□□□□ -1.5
SSX2IPQ9Y2D8 AC127381.1-201ENST00000555979 939 ntBASIC5.69□□□□□ -1.5
SSX2IPQ9Y2D8 AC023824.3-201ENST00000569003 562 ntBASIC5.69□□□□□ -1.5
SSX2IPQ9Y2D8 MTND3P13-201ENST00000574391 343 ntBASIC5.69□□□□□ -1.5
SSX2IPQ9Y2D8 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.69□□□□□ -1.5
SSX2IPQ9Y2D8 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC5.69□□□□□ -1.5
SSX2IPQ9Y2D8 GAS5-AS1-201ENST00000602767 694 ntBASIC5.69□□□□□ -1.5
SSX2IPQ9Y2D8 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.69□□□□□ -1.5
SSX2IPQ9Y2D8 AC084782.3-201ENST00000612282 578 ntBASIC5.69□□□□□ -1.5
SSX2IPQ9Y2D8 EIF3FP1-201ENST00000613970 806 ntBASIC5.69□□□□□ -1.5
SSX2IPQ9Y2D8 OR8G7P-201ENST00000616658 848 ntBASIC5.69□□□□□ -1.5
SSX2IPQ9Y2D8 uc_338.7-201ENST00000621834 124 ntBASIC5.69□□□□□ -1.5
SSX2IPQ9Y2D8 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.69□□□□□ -1.5
SSX2IPQ9Y2D8 AP002967.1-201ENST00000624203 539 ntBASIC5.69□□□□□ -1.5
SSX2IPQ9Y2D8 AL353662.3-201ENST00000625131 237 ntBASIC5.69□□□□□ -1.5
SSX2IPQ9Y2D8 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
SSX2IPQ9Y2D8 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SSX2IPQ9Y2D8 SMG1P7-201ENST00000565246 2704 ntBASIC5.69□□□□□ -1.5
SSX2IPQ9Y2D8 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SSX2IPQ9Y2D8 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
SSX2IPQ9Y2D8 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
SSX2IPQ9Y2D8 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.69□□□□□ -1.5
SSX2IPQ9Y2D8 AC097461.1-201ENST00000568928 2821 ntBASIC5.69□□□□□ -1.5
SSX2IPQ9Y2D8 MTND5P23-201ENST00000430812 1655 ntBASIC5.69□□□□□ -1.5
SSX2IPQ9Y2D8 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SSX2IPQ9Y2D8 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
SSX2IPQ9Y2D8 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SSX2IPQ9Y2D8 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.69□□□□□ -1.5
SSX2IPQ9Y2D8 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.68□□□□□ -1.5
SSX2IPQ9Y2D8 THAP12P4-201ENST00000528321 2266 ntBASIC5.68□□□□□ -1.5
SSX2IPQ9Y2D8 AC012321.1-201ENST00000561622 1588 ntBASIC5.68□□□□□ -1.5
SSX2IPQ9Y2D8 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
SSX2IPQ9Y2D8 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.68□□□□□ -1.5
SSX2IPQ9Y2D8 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.68□□□□□ -1.5
SSX2IPQ9Y2D8 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
SSX2IPQ9Y2D8 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SSX2IPQ9Y2D8 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SSX2IPQ9Y2D8 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SSX2IPQ9Y2D8 MIR600-201ENST00000385007 98 ntBASIC5.68□□□□□ -1.5
SSX2IPQ9Y2D8 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SSX2IPQ9Y2D8 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.68□□□□□ -1.5
SSX2IPQ9Y2D8 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.68□□□□□ -1.5
SSX2IPQ9Y2D8 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.68□□□□□ -1.5
SSX2IPQ9Y2D8 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC5.68□□□□□ -1.5
SSX2IPQ9Y2D8 RPL22P18-201ENST00000417197 377 ntBASIC5.68□□□□□ -1.5
SSX2IPQ9Y2D8 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.68□□□□□ -1.5
SSX2IPQ9Y2D8 USP9YP21-201ENST00000420603 432 ntBASIC5.68□□□□□ -1.5
SSX2IPQ9Y2D8 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.68□□□□□ -1.5
SSX2IPQ9Y2D8 AC083899.1-201ENST00000454465 3819 ntBASIC5.68□□□□□ -1.5
SSX2IPQ9Y2D8 AC091685.2-201ENST00000454924 864 ntBASIC5.68□□□□□ -1.5
SSX2IPQ9Y2D8 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.68□□□□□ -1.5
SSX2IPQ9Y2D8 RPL5P13-201ENST00000462840 709 ntBASIC5.68□□□□□ -1.5
SSX2IPQ9Y2D8 AC093890.1-201ENST00000502554 540 ntBASIC5.68□□□□□ -1.5
SSX2IPQ9Y2D8 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SSX2IPQ9Y2D8 AC105313.1-201ENST00000509121 353 ntBASIC5.68□□□□□ -1.5
SSX2IPQ9Y2D8 HPRT1P1-201ENST00000509498 657 ntBASIC5.68□□□□□ -1.5
SSX2IPQ9Y2D8 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SSX2IPQ9Y2D8 RN7SKP147-201ENST00000517154 244 ntBASIC5.68□□□□□ -1.5
SSX2IPQ9Y2D8 AP001804.2-201ENST00000533932 910 ntBASIC5.68□□□□□ -1.5
SSX2IPQ9Y2D8 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
SSX2IPQ9Y2D8 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.68□□□□□ -1.5
SSX2IPQ9Y2D8 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms