Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AC007389.2-201ENST00000434630 306 ntBASIC6.59□□□□□ -1.36
SHANK2Q9UPX8 UBE2V1P3-201ENST00000439651 417 ntBASIC6.59□□□□□ -1.36
SHANK2Q9UPX8 ENSA-211ENST00000503345 793 ntTSL 3 BASIC6.59□□□□□ -1.36
SHANK2Q9UPX8 HMGB3P16-201ENST00000508037 287 ntBASIC6.59□□□□□ -1.36
SHANK2Q9UPX8 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC6.59□□□□□ -1.36
SHANK2Q9UPX8 AL359219.2-201ENST00000555184 348 ntBASIC6.59□□□□□ -1.36
SHANK2Q9UPX8 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC6.59□□□□□ -1.36
SHANK2Q9UPX8 AGGF1P6-201ENST00000569213 976 ntBASIC6.59□□□□□ -1.36
SHANK2Q9UPX8 MIR7151-201ENST00000617477 60 ntBASIC6.59□□□□□ -1.36
SHANK2Q9UPX8 AC099654.3-201ENST00000447087 1546 ntBASIC6.58□□□□□ -1.36
SHANK2Q9UPX8 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
SHANK2Q9UPX8 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SHANK2Q9UPX8 AL603750.1-201ENST00000624216 1717 ntBASIC6.58□□□□□ -1.36
SHANK2Q9UPX8 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
SHANK2Q9UPX8 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC6.58□□□□□ -1.36
SHANK2Q9UPX8 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC6.58□□□□□ -1.36
SHANK2Q9UPX8 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.58□□□□□ -1.36
SHANK2Q9UPX8 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC6.58□□□□□ -1.36
SHANK2Q9UPX8 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
SHANK2Q9UPX8 MIR483-201ENST00000385070 76 ntBASIC6.58□□□□□ -1.36
SHANK2Q9UPX8 AL592291.1-201ENST00000403830 352 ntBASIC6.58□□□□□ -1.36
SHANK2Q9UPX8 AMMECR1LP1-201ENST00000415152 841 ntBASIC6.58□□□□□ -1.36
SHANK2Q9UPX8 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC6.58□□□□□ -1.36
SHANK2Q9UPX8 AL117339.2-201ENST00000430475 180 ntBASIC6.58□□□□□ -1.36
SHANK2Q9UPX8 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC6.58□□□□□ -1.36
SHANK2Q9UPX8 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC6.58□□□□□ -1.36
SHANK2Q9UPX8 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC6.58□□□□□ -1.36
SHANK2Q9UPX8 RPS20P4-201ENST00000461659 355 ntBASIC6.58□□□□□ -1.36
SHANK2Q9UPX8 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC6.58□□□□□ -1.36
SHANK2Q9UPX8 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC6.58□□□□□ -1.36
SHANK2Q9UPX8 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC6.58□□□□□ -1.36
SHANK2Q9UPX8 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SHANK2Q9UPX8 ST7-221ENST00000465133 2155 ntTSL 5 BASIC6.58□□□□□ -1.36
SHANK2Q9UPX8 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC6.58□□□□□ -1.36
SHANK2Q9UPX8 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
SHANK2Q9UPX8 AL079305.1-201ENST00000623159 3008 ntBASIC6.58□□□□□ -1.36
SHANK2Q9UPX8 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC6.58□□□□□ -1.36
SHANK2Q9UPX8 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SHANK2Q9UPX8 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
SHANK2Q9UPX8 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC6.57□□□□□ -1.36
SHANK2Q9UPX8 OFD1P5Y-201ENST00000447585 2590 ntBASIC6.57□□□□□ -1.36
SHANK2Q9UPX8 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SHANK2Q9UPX8 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SHANK2Q9UPX8 TCP11X1-202ENST00000622971 1372 ntBASIC6.57□□□□□ -1.36
SHANK2Q9UPX8 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SHANK2Q9UPX8 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.57□□□□□ -1.36
SHANK2Q9UPX8 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SHANK2Q9UPX8 MIR449B-201ENST00000384995 97 ntBASIC6.57□□□□□ -1.36
SHANK2Q9UPX8 CYCSP10-201ENST00000417973 294 ntBASIC6.57□□□□□ -1.36
SHANK2Q9UPX8 CDY14P-201ENST00000431260 1014 ntBASIC6.57□□□□□ -1.36
SHANK2Q9UPX8 RPEP2-201ENST00000432149 701 ntBASIC6.57□□□□□ -1.36
SHANK2Q9UPX8 CDY12P-201ENST00000440679 1015 ntBASIC6.57□□□□□ -1.36
SHANK2Q9UPX8 AC006326.1-201ENST00000445465 787 ntBASIC6.57□□□□□ -1.36
SHANK2Q9UPX8 CDY13P-201ENST00000445813 1015 ntBASIC6.57□□□□□ -1.36
SHANK2Q9UPX8 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SHANK2Q9UPX8 CDY23P-201ENST00000451661 1014 ntBASIC6.57□□□□□ -1.36
SHANK2Q9UPX8 RNA5SP246-201ENST00000458909 119 ntBASIC6.57□□□□□ -1.36
SHANK2Q9UPX8 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC6.57□□□□□ -1.36
SHANK2Q9UPX8 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC6.57□□□□□ -1.36
SHANK2Q9UPX8 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC6.57□□□□□ -1.36
SHANK2Q9UPX8 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC6.57□□□□□ -1.36
SHANK2Q9UPX8 RN7SL600P-201ENST00000581811 299 ntBASIC6.57□□□□□ -1.36
SHANK2Q9UPX8 AF131215.7-201ENST00000602443 707 ntBASIC6.57□□□□□ -1.36
SHANK2Q9UPX8 AC005034.4-201ENST00000603612 899 ntBASIC6.57□□□□□ -1.36
SHANK2Q9UPX8 IMMP1LP1-201ENST00000605170 488 ntBASIC6.57□□□□□ -1.36
SHANK2Q9UPX8 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC6.57□□□□□ -1.36
SHANK2Q9UPX8 AC068870.3-201ENST00000625077 2536 ntBASIC6.57□□□□□ -1.36
SHANK2Q9UPX8 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
SHANK2Q9UPX8 PAPPA-AS1-201ENST00000445861 2450 ntBASIC6.57□□□□□ -1.36
SHANK2Q9UPX8 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SHANK2Q9UPX8 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SHANK2Q9UPX8 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
SHANK2Q9UPX8 AP002512.4-202ENST00000641599 4530 ntBASIC6.56□□□□□ -1.36
SHANK2Q9UPX8 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC6.56□□□□□ -1.36
SHANK2Q9UPX8 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
SHANK2Q9UPX8 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SHANK2Q9UPX8 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC6.56□□□□□ -1.36
SHANK2Q9UPX8 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC6.56□□□□□ -1.36
SHANK2Q9UPX8 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC6.56□□□□□ -1.36
SHANK2Q9UPX8 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SHANK2Q9UPX8 YME1L1P1-201ENST00000429435 297 ntBASIC6.56□□□□□ -1.36
SHANK2Q9UPX8 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC6.56□□□□□ -1.36
SHANK2Q9UPX8 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC6.56□□□□□ -1.36
SHANK2Q9UPX8 RN7SL812P-201ENST00000493791 279 ntBASIC6.56□□□□□ -1.36
SHANK2Q9UPX8 AC010374.1-201ENST00000503762 1237 ntBASIC6.56□□□□□ -1.36
SHANK2Q9UPX8 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC6.56□□□□□ -1.36
SHANK2Q9UPX8 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC6.56□□□□□ -1.36
SHANK2Q9UPX8 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC6.56□□□□□ -1.36
SHANK2Q9UPX8 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC6.56□□□□□ -1.36
SHANK2Q9UPX8 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.56□□□□□ -1.36
SHANK2Q9UPX8 AL022393.1-201ENST00000625142 1677 ntBASIC6.56□□□□□ -1.36
SHANK2Q9UPX8 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
SHANK2Q9UPX8 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC6.56□□□□□ -1.36
SHANK2Q9UPX8 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.56□□□□□ -1.36
SHANK2Q9UPX8 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SHANK2Q9UPX8 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SHANK2Q9UPX8 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
SHANK2Q9UPX8 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC6.55□□□□□ -1.36
SHANK2Q9UPX8 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
SHANK2Q9UPX8 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms