Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.27□□□□□ -1.57
VPS4AQ9UN37 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.27□□□□□ -1.57
VPS4AQ9UN37 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.27□□□□□ -1.57
VPS4AQ9UN37 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.26□□□□□ -1.57
VPS4AQ9UN37 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
VPS4AQ9UN37 SUCLA2P2-201ENST00000417269 1309 ntBASIC5.26□□□□□ -1.57
VPS4AQ9UN37 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
VPS4AQ9UN37 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
VPS4AQ9UN37 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.26□□□□□ -1.57
VPS4AQ9UN37 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.26□□□□□ -1.57
VPS4AQ9UN37 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VPS4AQ9UN37 AL133268.1-201ENST00000405676 1401 ntBASIC5.26□□□□□ -1.57
VPS4AQ9UN37 VN2R3P-201ENST00000422626 1412 ntBASIC5.26□□□□□ -1.57
VPS4AQ9UN37 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
VPS4AQ9UN37 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VPS4AQ9UN37 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
VPS4AQ9UN37 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VPS4AQ9UN37 RNU6-1320P-201ENST00000390838 107 ntBASIC5.26□□□□□ -1.57
VPS4AQ9UN37 RNU6-1269P-201ENST00000391139 107 ntBASIC5.26□□□□□ -1.57
VPS4AQ9UN37 MCTS2P-201ENST00000394552 546 ntBASIC5.26□□□□□ -1.57
VPS4AQ9UN37 AL049545.1-201ENST00000401856 572 ntBASIC5.26□□□□□ -1.57
VPS4AQ9UN37 MTCO2P31-201ENST00000402702 684 ntBASIC5.26□□□□□ -1.57
VPS4AQ9UN37 AL513175.2-201ENST00000422071 443 ntBASIC5.26□□□□□ -1.57
VPS4AQ9UN37 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC5.26□□□□□ -1.57
VPS4AQ9UN37 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC5.26□□□□□ -1.57
VPS4AQ9UN37 RPS4XP16-201ENST00000427198 791 ntBASIC5.26□□□□□ -1.57
VPS4AQ9UN37 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.26□□□□□ -1.57
VPS4AQ9UN37 RPL7L1P9-201ENST00000431298 745 ntBASIC5.26□□□□□ -1.57
VPS4AQ9UN37 MTCO1P52-201ENST00000433928 531 ntBASIC5.26□□□□□ -1.57
VPS4AQ9UN37 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.26□□□□□ -1.57
VPS4AQ9UN37 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.26□□□□□ -1.57
VPS4AQ9UN37 AC073052.1-201ENST00000440417 714 ntBASIC5.26□□□□□ -1.57
VPS4AQ9UN37 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.26□□□□□ -1.57
VPS4AQ9UN37 PTGES3P5-201ENST00000455109 434 ntBASIC5.26□□□□□ -1.57
VPS4AQ9UN37 RNU6-599P-201ENST00000459383 107 ntBASIC5.26□□□□□ -1.57
VPS4AQ9UN37 RNU6-1193P-201ENST00000459461 107 ntBASIC5.26□□□□□ -1.57
VPS4AQ9UN37 AC107015.1-201ENST00000466902 747 ntBASIC5.26□□□□□ -1.57
VPS4AQ9UN37 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.26□□□□□ -1.57
VPS4AQ9UN37 AC008837.1-201ENST00000511513 412 ntBASIC5.26□□□□□ -1.57
VPS4AQ9UN37 AC119751.1-201ENST00000513357 765 ntBASIC5.26□□□□□ -1.57
VPS4AQ9UN37 SEPT10P1-201ENST00000517342 1162 ntBASIC5.26□□□□□ -1.57
VPS4AQ9UN37 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.26□□□□□ -1.57
VPS4AQ9UN37 LRRC6P1-201ENST00000532188 885 ntBASIC5.26□□□□□ -1.57
VPS4AQ9UN37 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.26□□□□□ -1.57
VPS4AQ9UN37 AC006518.2-201ENST00000542513 940 ntBASIC5.26□□□□□ -1.57
VPS4AQ9UN37 AC023050.2-201ENST00000544968 387 ntBASIC5.26□□□□□ -1.57
VPS4AQ9UN37 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC5.26□□□□□ -1.57
VPS4AQ9UN37 SETP1-201ENST00000556014 845 ntBASIC5.26□□□□□ -1.57
VPS4AQ9UN37 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC5.26□□□□□ -1.57
VPS4AQ9UN37 CSNK1A1P1-202ENST00000563423 981 ntBASIC5.26□□□□□ -1.57
VPS4AQ9UN37 RN7SL708P-201ENST00000580952 299 ntBASIC5.26□□□□□ -1.57
VPS4AQ9UN37 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.26□□□□□ -1.57
VPS4AQ9UN37 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.26□□□□□ -1.57
VPS4AQ9UN37 AC025588.2-201ENST00000604851 466 ntBASIC5.26□□□□□ -1.57
VPS4AQ9UN37 AC005377.1-201ENST00000605126 456 ntBASIC5.26□□□□□ -1.57
VPS4AQ9UN37 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.26□□□□□ -1.57
VPS4AQ9UN37 AC010975.3-201ENST00000618727 978 ntBASIC5.26□□□□□ -1.57
VPS4AQ9UN37 RNU6-368P-201ENST00000620928 107 ntBASIC5.26□□□□□ -1.57
VPS4AQ9UN37 uc_338.7-201ENST00000621834 124 ntBASIC5.26□□□□□ -1.57
VPS4AQ9UN37 RNU6-538P-201ENST00000622329 107 ntBASIC5.26□□□□□ -1.57
VPS4AQ9UN37 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.26□□□□□ -1.57
VPS4AQ9UN37 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
VPS4AQ9UN37 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
VPS4AQ9UN37 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.26□□□□□ -1.57
VPS4AQ9UN37 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.26□□□□□ -1.57
VPS4AQ9UN37 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.26□□□□□ -1.57
VPS4AQ9UN37 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VPS4AQ9UN37 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.26□□□□□ -1.57
VPS4AQ9UN37 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VPS4AQ9UN37 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
VPS4AQ9UN37 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VPS4AQ9UN37 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VPS4AQ9UN37 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VPS4AQ9UN37 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
VPS4AQ9UN37 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
VPS4AQ9UN37 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
VPS4AQ9UN37 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.25□□□□□ -1.57
VPS4AQ9UN37 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.25□□□□□ -1.57
VPS4AQ9UN37 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
VPS4AQ9UN37 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.25□□□□□ -1.57
VPS4AQ9UN37 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VPS4AQ9UN37 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VPS4AQ9UN37 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VPS4AQ9UN37 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
VPS4AQ9UN37 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
VPS4AQ9UN37 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
VPS4AQ9UN37 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VPS4AQ9UN37 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
VPS4AQ9UN37 ANKRD36P1-201ENST00000344424 659 ntBASIC5.25□□□□□ -1.57
VPS4AQ9UN37 RNU6-249P-201ENST00000363016 102 ntBASIC5.25□□□□□ -1.57
VPS4AQ9UN37 RNA5SP27-201ENST00000363839 119 ntBASIC5.25□□□□□ -1.57
VPS4AQ9UN37 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC5.25□□□□□ -1.57
VPS4AQ9UN37 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC5.25□□□□□ -1.57
VPS4AQ9UN37 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC5.25□□□□□ -1.57
VPS4AQ9UN37 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC5.25□□□□□ -1.57
VPS4AQ9UN37 Z83846.1-201ENST00000446798 265 ntBASIC5.25□□□□□ -1.57
VPS4AQ9UN37 AL589880.1-201ENST00000448271 287 ntBASIC5.25□□□□□ -1.57
VPS4AQ9UN37 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.25□□□□□ -1.57
VPS4AQ9UN37 CBX1P2-201ENST00000453841 458 ntBASIC5.25□□□□□ -1.57
VPS4AQ9UN37 AC244505.3-201ENST00000454598 187 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms