Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC8.87□□□□□ -0.99
SHROOM4Q9ULL8 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
SHROOM4Q9ULL8 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
SHROOM4Q9ULL8 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
SHROOM4Q9ULL8 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
SHROOM4Q9ULL8 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
SHROOM4Q9ULL8 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC8.87□□□□□ -0.99
SHROOM4Q9ULL8 RPL23AP59-201ENST00000399415 461 ntBASIC8.87□□□□□ -0.99
SHROOM4Q9ULL8 RGS17P1-201ENST00000423358 553 ntBASIC8.87□□□□□ -0.99
SHROOM4Q9ULL8 AC114878.1-201ENST00000441166 358 ntBASIC8.87□□□□□ -0.99
SHROOM4Q9ULL8 MRPL35P2-201ENST00000448009 511 ntBASIC8.87□□□□□ -0.99
SHROOM4Q9ULL8 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC8.87□□□□□ -0.99
SHROOM4Q9ULL8 UQCRHP4-201ENST00000471686 272 ntBASIC8.87□□□□□ -0.99
SHROOM4Q9ULL8 AC091544.1-201ENST00000484702 348 ntBASIC8.87□□□□□ -0.99
SHROOM4Q9ULL8 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC8.87□□□□□ -0.99
SHROOM4Q9ULL8 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC8.87□□□□□ -0.99
SHROOM4Q9ULL8 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC8.87□□□□□ -0.99
SHROOM4Q9ULL8 RN7SL652P-201ENST00000577769 300 ntBASIC8.87□□□□□ -0.99
SHROOM4Q9ULL8 AL583832.1-201ENST00000603227 784 ntBASIC8.87□□□□□ -0.99
SHROOM4Q9ULL8 AC073137.1-201ENST00000605636 634 ntBASIC8.87□□□□□ -0.99
SHROOM4Q9ULL8 AC099676.1-201ENST00000608886 657 ntBASIC8.87□□□□□ -0.99
SHROOM4Q9ULL8 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC8.87□□□□□ -0.99
SHROOM4Q9ULL8 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
SHROOM4Q9ULL8 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
SHROOM4Q9ULL8 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC8.87□□□□□ -0.99
SHROOM4Q9ULL8 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
SHROOM4Q9ULL8 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC8.86□□□□□ -0.99
SHROOM4Q9ULL8 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
SHROOM4Q9ULL8 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
SHROOM4Q9ULL8 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC8.86□□□□□ -0.99
SHROOM4Q9ULL8 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
SHROOM4Q9ULL8 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
SHROOM4Q9ULL8 OR5T3-201ENST00000303059 1023 ntBASIC8.86□□□□□ -0.99
SHROOM4Q9ULL8 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
SHROOM4Q9ULL8 FAM204CP-201ENST00000424489 642 ntBASIC8.86□□□□□ -0.99
SHROOM4Q9ULL8 AL445528.1-201ENST00000426330 420 ntBASIC8.86□□□□□ -0.99
SHROOM4Q9ULL8 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC8.86□□□□□ -0.99
SHROOM4Q9ULL8 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC8.86□□□□□ -0.99
SHROOM4Q9ULL8 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC8.86□□□□□ -0.99
SHROOM4Q9ULL8 RN7SL517P-201ENST00000462240 305 ntBASIC8.86□□□□□ -0.99
SHROOM4Q9ULL8 AC098799.1-201ENST00000504752 800 ntBASIC8.86□□□□□ -0.99
SHROOM4Q9ULL8 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC8.86□□□□□ -0.99
SHROOM4Q9ULL8 AC022916.3-201ENST00000592961 742 ntBASIC8.86□□□□□ -0.99
SHROOM4Q9ULL8 RPL7P50-201ENST00000600588 727 ntBASIC8.86□□□□□ -0.99
SHROOM4Q9ULL8 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC8.86□□□□□ -0.99
SHROOM4Q9ULL8 ACTR3BP2-202ENST00000623630 1338 ntBASIC8.86□□□□□ -0.99
SHROOM4Q9ULL8 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC8.86□□□□□ -0.99
SHROOM4Q9ULL8 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
SHROOM4Q9ULL8 FTO-203ENST00000460382 1517 ntTSL 5 BASIC8.85□□□□□ -0.99
SHROOM4Q9ULL8 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC8.85□□□□□ -0.99
SHROOM4Q9ULL8 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC8.85□□□□□ -0.99
SHROOM4Q9ULL8 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
SHROOM4Q9ULL8 AL354766.1-201ENST00000423396 542 ntBASIC8.85□□□□□ -0.99
SHROOM4Q9ULL8 VN1R34P-201ENST00000447387 883 ntBASIC8.85□□□□□ -0.99
SHROOM4Q9ULL8 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
SHROOM4Q9ULL8 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC8.85□□□□□ -0.99
SHROOM4Q9ULL8 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC8.85□□□□□ -0.99
SHROOM4Q9ULL8 EIF4A2P3-201ENST00000525903 1055 ntBASIC8.85□□□□□ -0.99
SHROOM4Q9ULL8 OR8R1P-201ENST00000543943 764 ntBASIC8.85□□□□□ -0.99
SHROOM4Q9ULL8 FKBP1BP1-201ENST00000553366 325 ntBASIC8.85□□□□□ -0.99
SHROOM4Q9ULL8 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC8.85□□□□□ -0.99
SHROOM4Q9ULL8 AL021368.1-201ENST00000607490 540 ntBASIC8.85□□□□□ -0.99
SHROOM4Q9ULL8 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC8.85□□□□□ -0.99
SHROOM4Q9ULL8 WAC-209ENST00000428935 1320 ntTSL 2 BASIC8.85□□□□□ -0.99
SHROOM4Q9ULL8 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
SHROOM4Q9ULL8 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
SHROOM4Q9ULL8 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
SHROOM4Q9ULL8 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC8.84□□□□□ -0.99
SHROOM4Q9ULL8 UGT2B26P-201ENST00000508672 1613 ntBASIC8.84□□□□□ -0.99
SHROOM4Q9ULL8 AL121657.1-201ENST00000327215 531 ntBASIC8.84□□□□□ -0.99
SHROOM4Q9ULL8 RNA5SP366-201ENST00000365454 123 ntBASIC8.84□□□□□ -0.99
SHROOM4Q9ULL8 AL356806.1-201ENST00000422524 916 ntBASIC8.84□□□□□ -0.99
SHROOM4Q9ULL8 AC025164.1-201ENST00000496249 478 ntBASIC8.84□□□□□ -0.99
SHROOM4Q9ULL8 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC8.84□□□□□ -0.99
SHROOM4Q9ULL8 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC8.84□□□□□ -0.99
SHROOM4Q9ULL8 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC8.84□□□□□ -0.99
SHROOM4Q9ULL8 HMGB1P51-201ENST00000605166 638 ntBASIC8.84□□□□□ -0.99
SHROOM4Q9ULL8 AP002512.4-202ENST00000641599 4530 ntBASIC8.84□□□□□ -0.99
SHROOM4Q9ULL8 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
SHROOM4Q9ULL8 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC8.84□□□□□ -0.99
SHROOM4Q9ULL8 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
SHROOM4Q9ULL8 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
SHROOM4Q9ULL8 RNA5SP105-201ENST00000391123 113 ntBASIC8.83□□□□□ -1
SHROOM4Q9ULL8 AL590623.1-201ENST00000427864 105 ntBASIC8.83□□□□□ -1
SHROOM4Q9ULL8 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC8.83□□□□□ -1
SHROOM4Q9ULL8 AC092162.1-201ENST00000432828 434 ntBASIC8.83□□□□□ -1
SHROOM4Q9ULL8 RN7SL98P-201ENST00000462271 300 ntBASIC8.83□□□□□ -1
SHROOM4Q9ULL8 CASC19-203ENST00000523510 575 ntTSL 3 BASIC8.83□□□□□ -1
SHROOM4Q9ULL8 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC8.83□□□□□ -1
SHROOM4Q9ULL8 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC8.83□□□□□ -1
SHROOM4Q9ULL8 AC009032.1-201ENST00000617574 431 ntBASIC8.83□□□□□ -1
SHROOM4Q9ULL8 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
SHROOM4Q9ULL8 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
SHROOM4Q9ULL8 NOL8P1-201ENST00000508336 3529 ntBASIC8.83□□□□□ -1
SHROOM4Q9ULL8 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC8.83□□□□□ -1
SHROOM4Q9ULL8 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
SHROOM4Q9ULL8 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
SHROOM4Q9ULL8 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
SHROOM4Q9ULL8 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC8.83□□□□□ -1
SHROOM4Q9ULL8 GVINP1-202ENST00000531871 7271 ntBASIC8.83□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms