Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 AC125336.1-201ENST00000508893 2827 ntBASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 RNU6-621P-201ENST00000364752 109 ntBASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 SNORA11.5-201ENST00000408163 128 ntBASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 RNU2-16P-201ENST00000410712 136 ntBASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 AL035660.1-201ENST00000422041 222 ntBASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 DPRXP1-201ENST00000426312 460 ntBASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 CDY14P-201ENST00000431260 1014 ntBASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 AL138899.2-201ENST00000439139 499 ntBASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 CDY23P-201ENST00000451661 1014 ntBASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 MTCYBP1-201ENST00000454315 1119 ntBASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 RFC5P1-201ENST00000454419 874 ntBASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 PNPLA4P1-201ENST00000458328 305 ntBASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 NDUFA5P5-201ENST00000468361 342 ntBASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 VPS26AP1-201ENST00000483197 979 ntBASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 RPL38P3-201ENST00000484463 213 ntBASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 TRBV5-2-201ENST00000489095 273 ntBASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 AC147055.4-201ENST00000504399 745 ntBASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 AGGF1P7-201ENST00000562369 913 ntBASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 TXNP4-201ENST00000575018 310 ntBASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 MIR4675-201ENST00000577898 77 ntBASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 WISP1-OT1-201ENST00000602893 642 ntBASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 AC018714.1-201ENST00000605028 208 ntBASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 AL365181.4-201ENST00000609800 547 ntBASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 AC004948.1-201ENST00000609858 672 ntBASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 AL096712.1-201ENST00000614561 159 ntBASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 AC129915.3-201ENST00000634128 948 ntBASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 BRAFP1-201ENST00000445336 2703 ntBASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 AC106872.5-201ENST00000508856 1416 ntBASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.07□□□□□ -1.44
PPARGC1AQ9UBK2 PDZK1P1-202ENST00000425209 1350 ntBASIC6.06□□□□□ -1.44
PPARGC1AQ9UBK2 AC096656.1-201ENST00000623826 1364 ntBASIC6.06□□□□□ -1.44
PPARGC1AQ9UBK2 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.06□□□□□ -1.44
PPARGC1AQ9UBK2 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
PPARGC1AQ9UBK2 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.06□□□□□ -1.44
PPARGC1AQ9UBK2 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
PPARGC1AQ9UBK2 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
PPARGC1AQ9UBK2 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PPARGC1AQ9UBK2 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.06□□□□□ -1.44
PPARGC1AQ9UBK2 AC097063.1-201ENST00000426714 1797 ntBASIC6.06□□□□□ -1.44
PPARGC1AQ9UBK2 PARP4P2-201ENST00000446672 3326 ntBASIC6.06□□□□□ -1.44
PPARGC1AQ9UBK2 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PPARGC1AQ9UBK2 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
PPARGC1AQ9UBK2 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
PPARGC1AQ9UBK2 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PPARGC1AQ9UBK2 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PPARGC1AQ9UBK2 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PPARGC1AQ9UBK2 HMGB1P5-201ENST00000255320 642 ntBASIC6.06□□□□□ -1.44
PPARGC1AQ9UBK2 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PPARGC1AQ9UBK2 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
PPARGC1AQ9UBK2 RNU6-500P-201ENST00000362349 107 ntBASIC6.06□□□□□ -1.44
PPARGC1AQ9UBK2 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
PPARGC1AQ9UBK2 HMGB3P7-201ENST00000400214 611 ntBASIC6.06□□□□□ -1.44
PPARGC1AQ9UBK2 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PPARGC1AQ9UBK2 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.06□□□□□ -1.44
PPARGC1AQ9UBK2 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC6.06□□□□□ -1.44
PPARGC1AQ9UBK2 AC019050.1-201ENST00000418508 492 ntBASIC6.06□□□□□ -1.44
PPARGC1AQ9UBK2 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.06□□□□□ -1.44
PPARGC1AQ9UBK2 RNGTTP1-201ENST00000420965 728 ntBASIC6.06□□□□□ -1.44
PPARGC1AQ9UBK2 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC6.06□□□□□ -1.44
PPARGC1AQ9UBK2 MTCYBP5-201ENST00000423752 1135 ntBASIC6.06□□□□□ -1.44
PPARGC1AQ9UBK2 AKR1B10P1-201ENST00000425765 942 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms