Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CCDC28BQ9BUN5 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC4.58□□□□□ -1.68
CCDC28BQ9BUN5 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.58□□□□□ -1.68
CCDC28BQ9BUN5 TMF1P1-201ENST00000576058 373 ntBASIC4.58□□□□□ -1.68
CCDC28BQ9BUN5 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.58□□□□□ -1.68
CCDC28BQ9BUN5 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.58□□□□□ -1.68
CCDC28BQ9BUN5 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC4.58□□□□□ -1.68
CCDC28BQ9BUN5 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC28BQ9BUN5 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.58□□□□□ -1.68
CCDC28BQ9BUN5 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CCDC28BQ9BUN5 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC28BQ9BUN5 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC28BQ9BUN5 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC28BQ9BUN5 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CCDC28BQ9BUN5 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
CCDC28BQ9BUN5 SNORA40.4-201ENST00000390971 128 ntBASIC4.57□□□□□ -1.68
CCDC28BQ9BUN5 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.57□□□□□ -1.68
CCDC28BQ9BUN5 HMGB3P7-201ENST00000400214 611 ntBASIC4.57□□□□□ -1.68
CCDC28BQ9BUN5 TRIM60P17-201ENST00000415181 719 ntBASIC4.57□□□□□ -1.68
CCDC28BQ9BUN5 BMS1P13-201ENST00000417301 885 ntBASIC4.57□□□□□ -1.68
CCDC28BQ9BUN5 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.57□□□□□ -1.68
CCDC28BQ9BUN5 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.57□□□□□ -1.68
CCDC28BQ9BUN5 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.57□□□□□ -1.68
CCDC28BQ9BUN5 AL163193.1-201ENST00000444895 788 ntBASIC4.57□□□□□ -1.68
CCDC28BQ9BUN5 GEMIN8P3-201ENST00000445417 720 ntBASIC4.57□□□□□ -1.68
CCDC28BQ9BUN5 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.57□□□□□ -1.68
CCDC28BQ9BUN5 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.57□□□□□ -1.68
CCDC28BQ9BUN5 MTND5P8-201ENST00000449817 1083 ntBASIC4.57□□□□□ -1.68
CCDC28BQ9BUN5 HSPE1P22-201ENST00000456856 327 ntBASIC4.57□□□□□ -1.68
CCDC28BQ9BUN5 RPSAP39-201ENST00000467439 883 ntBASIC4.57□□□□□ -1.68
CCDC28BQ9BUN5 RPS4XP1-201ENST00000482189 787 ntBASIC4.57□□□□□ -1.68
CCDC28BQ9BUN5 AC025164.1-201ENST00000496249 478 ntBASIC4.57□□□□□ -1.68
CCDC28BQ9BUN5 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.57□□□□□ -1.68
CCDC28BQ9BUN5 NDUFB4P12-201ENST00000513465 390 ntBASIC4.57□□□□□ -1.68
CCDC28BQ9BUN5 SEC11B-201ENST00000518383 499 ntBASIC4.57□□□□□ -1.68
CCDC28BQ9BUN5 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC28BQ9BUN5 DUX4L52-201ENST00000549363 777 ntBASIC4.57□□□□□ -1.68
CCDC28BQ9BUN5 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC4.57□□□□□ -1.68
CCDC28BQ9BUN5 AC020978.7-201ENST00000575953 1187 ntBASIC4.57□□□□□ -1.68
CCDC28BQ9BUN5 MIR5699-201ENST00000578903 90 ntBASIC4.57□□□□□ -1.68
CCDC28BQ9BUN5 ADAD1P2-201ENST00000588476 646 ntBASIC4.57□□□□□ -1.68
CCDC28BQ9BUN5 AC008521.2-201ENST00000591021 259 ntBASIC4.57□□□□□ -1.68
CCDC28BQ9BUN5 AC092474.3-201ENST00000603022 568 ntBASIC4.57□□□□□ -1.68
CCDC28BQ9BUN5 AC007497.1-201ENST00000610421 561 ntBASIC4.57□□□□□ -1.68
CCDC28BQ9BUN5 AC126915.2-201ENST00000610957 190 ntBASIC4.57□□□□□ -1.68
CCDC28BQ9BUN5 AC079395.2-201ENST00000610982 737 ntBASIC4.57□□□□□ -1.68
CCDC28BQ9BUN5 AL353726.1-201ENST00000614041 1000 ntBASIC4.57□□□□□ -1.68
CCDC28BQ9BUN5 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.57□□□□□ -1.68
CCDC28BQ9BUN5 AL356490.1-201ENST00000623079 479 ntBASIC4.57□□□□□ -1.68
CCDC28BQ9BUN5 AP002505.2-201ENST00000623585 696 ntBASIC4.57□□□□□ -1.68
CCDC28BQ9BUN5 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC28BQ9BUN5 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC28BQ9BUN5 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
CCDC28BQ9BUN5 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC28BQ9BUN5 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC28BQ9BUN5 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.57□□□□□ -1.68
CCDC28BQ9BUN5 KARSP3-201ENST00000571212 1504 ntBASIC4.56□□□□□ -1.68
CCDC28BQ9BUN5 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.56□□□□□ -1.68
CCDC28BQ9BUN5 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC4.56□□□□□ -1.68
CCDC28BQ9BUN5 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.56□□□□□ -1.68
CCDC28BQ9BUN5 MIR365B-201ENST00000362317 111 ntBASIC4.56□□□□□ -1.68
CCDC28BQ9BUN5 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CCDC28BQ9BUN5 MIR143-201ENST00000385300 106 ntBASIC4.56□□□□□ -1.68
CCDC28BQ9BUN5 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC28BQ9BUN5 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC28BQ9BUN5 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.56□□□□□ -1.68
CCDC28BQ9BUN5 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.56□□□□□ -1.68
CCDC28BQ9BUN5 AL603766.1-201ENST00000407763 664 ntBASIC4.56□□□□□ -1.68
CCDC28BQ9BUN5 RNA5SP178-201ENST00000410380 128 ntBASIC4.56□□□□□ -1.68
CCDC28BQ9BUN5 RN7SKP59-201ENST00000410520 314 ntBASIC4.56□□□□□ -1.68
CCDC28BQ9BUN5 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC28BQ9BUN5 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.56□□□□□ -1.68
CCDC28BQ9BUN5 RPL35AP24-201ENST00000413846 330 ntBASIC4.56□□□□□ -1.68
CCDC28BQ9BUN5 ARAFP1-201ENST00000422172 605 ntBASIC4.56□□□□□ -1.68
CCDC28BQ9BUN5 AL391219.1-201ENST00000422570 483 ntBASIC4.56□□□□□ -1.68
CCDC28BQ9BUN5 RPL21P91-201ENST00000429231 479 ntBASIC4.56□□□□□ -1.68
CCDC28BQ9BUN5 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC28BQ9BUN5 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC28BQ9BUN5 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC4.56□□□□□ -1.68
CCDC28BQ9BUN5 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC28BQ9BUN5 MRPS33P4-201ENST00000434892 317 ntBASIC4.56□□□□□ -1.68
CCDC28BQ9BUN5 RHOT1P3-201ENST00000436571 331 ntBASIC4.56□□□□□ -1.68
CCDC28BQ9BUN5 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC28BQ9BUN5 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC28BQ9BUN5 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.56□□□□□ -1.68
CCDC28BQ9BUN5 AC023141.9-201ENST00000458734 412 ntBASIC4.56□□□□□ -1.68
CCDC28BQ9BUN5 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC28BQ9BUN5 AC008897.1-201ENST00000494006 347 ntBASIC4.56□□□□□ -1.68
CCDC28BQ9BUN5 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4.56□□□□□ -1.68
CCDC28BQ9BUN5 AC139783.2-201ENST00000504847 1145 ntBASIC4.56□□□□□ -1.68
CCDC28BQ9BUN5 AC024558.1-201ENST00000505008 528 ntBASIC4.56□□□□□ -1.68
CCDC28BQ9BUN5 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.56□□□□□ -1.68
CCDC28BQ9BUN5 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.56□□□□□ -1.68
CCDC28BQ9BUN5 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC28BQ9BUN5 RNA5SP228-201ENST00000516232 133 ntBASIC4.56□□□□□ -1.68
CCDC28BQ9BUN5 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC28BQ9BUN5 AC124068.1-201ENST00000563131 678 ntBASIC4.56□□□□□ -1.68
CCDC28BQ9BUN5 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC28BQ9BUN5 LINC00557-201ENST00000563184 1279 ntBASIC4.56□□□□□ -1.68
CCDC28BQ9BUN5 RN7SL802P-201ENST00000577858 299 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms