Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.18□□□□□ -1.42
ERCC4Q92889 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
ERCC4Q92889 AC092376.2-201ENST00000622621 4116 ntBASIC6.18□□□□□ -1.42
ERCC4Q92889 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
ERCC4Q92889 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ERCC4Q92889 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC6.18□□□□□ -1.42
ERCC4Q92889 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.18□□□□□ -1.42
ERCC4Q92889 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ERCC4Q92889 AC091305.2-201ENST00000624049 1576 ntBASIC6.18□□□□□ -1.42
ERCC4Q92889 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC6.18□□□□□ -1.42
ERCC4Q92889 AC104260.2-201ENST00000623551 3497 ntBASIC6.18□□□□□ -1.42
ERCC4Q92889 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
ERCC4Q92889 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC6.17□□□□□ -1.42
ERCC4Q92889 ALB-214ENST00000509063 1911 ntTSL 5 BASIC6.17□□□□□ -1.42
ERCC4Q92889 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
ERCC4Q92889 RNU4-24P-201ENST00000364565 139 ntBASIC6.17□□□□□ -1.42
ERCC4Q92889 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ERCC4Q92889 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
ERCC4Q92889 SNORD56.6-201ENST00000384569 71 ntBASIC6.17□□□□□ -1.42
ERCC4Q92889 RNA5SP105-201ENST00000391123 113 ntBASIC6.17□□□□□ -1.42
ERCC4Q92889 RSL24D1P4-201ENST00000400938 484 ntBASIC6.17□□□□□ -1.42
ERCC4Q92889 AL138880.1-201ENST00000405824 642 ntBASIC6.17□□□□□ -1.42
ERCC4Q92889 HMGN1P20-201ENST00000411849 300 ntBASIC6.17□□□□□ -1.42
ERCC4Q92889 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC6.17□□□□□ -1.42
ERCC4Q92889 AL035660.1-201ENST00000422041 222 ntBASIC6.17□□□□□ -1.42
ERCC4Q92889 TNPO1P1-201ENST00000423641 1138 ntBASIC6.17□□□□□ -1.42
ERCC4Q92889 RAC1P8-201ENST00000427086 527 ntBASIC6.17□□□□□ -1.42
ERCC4Q92889 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC6.17□□□□□ -1.42
ERCC4Q92889 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC6.17□□□□□ -1.42
ERCC4Q92889 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
ERCC4Q92889 AC097499.1-201ENST00000444277 208 ntBASIC6.17□□□□□ -1.42
ERCC4Q92889 MTCO3P16-201ENST00000454456 754 ntBASIC6.17□□□□□ -1.42
ERCC4Q92889 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
ERCC4Q92889 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC6.17□□□□□ -1.42
ERCC4Q92889 EIF4A2P4-201ENST00000458691 1196 ntBASIC6.17□□□□□ -1.42
ERCC4Q92889 AC069528.1-202ENST00000482888 637 ntBASIC6.17□□□□□ -1.42
ERCC4Q92889 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC6.17□□□□□ -1.42
ERCC4Q92889 LAMTOR3P2-201ENST00000504479 232 ntBASIC6.17□□□□□ -1.42
ERCC4Q92889 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.17□□□□□ -1.42
ERCC4Q92889 HMGN1P9-201ENST00000515212 298 ntBASIC6.17□□□□□ -1.42
ERCC4Q92889 SCARNA20.4-201ENST00000516969 131 ntBASIC6.17□□□□□ -1.42
ERCC4Q92889 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.17□□□□□ -1.42
ERCC4Q92889 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC6.17□□□□□ -1.42
ERCC4Q92889 AP003461.1-201ENST00000528866 78 ntBASIC6.17□□□□□ -1.42
ERCC4Q92889 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6.17□□□□□ -1.42
ERCC4Q92889 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
ERCC4Q92889 PDCL2P2-201ENST00000533651 189 ntBASIC6.17□□□□□ -1.42
ERCC4Q92889 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
ERCC4Q92889 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
ERCC4Q92889 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC6.17□□□□□ -1.42
ERCC4Q92889 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.17□□□□□ -1.42
ERCC4Q92889 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.17□□□□□ -1.42
ERCC4Q92889 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC6.17□□□□□ -1.42
ERCC4Q92889 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC6.17□□□□□ -1.42
ERCC4Q92889 AC024023.1-201ENST00000624530 922 ntBASIC6.17□□□□□ -1.42
ERCC4Q92889 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
ERCC4Q92889 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC6.17□□□□□ -1.42
ERCC4Q92889 AC087565.3-203ENST00000641018 837 ntBASIC6.17□□□□□ -1.42
ERCC4Q92889 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC6.17□□□□□ -1.42
ERCC4Q92889 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
ERCC4Q92889 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
ERCC4Q92889 WAC-209ENST00000428935 1320 ntTSL 2 BASIC6.17□□□□□ -1.42
ERCC4Q92889 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC6.17□□□□□ -1.42
ERCC4Q92889 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ERCC4Q92889 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC6.17□□□□□ -1.42
ERCC4Q92889 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ERCC4Q92889 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
ERCC4Q92889 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ERCC4Q92889 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ERCC4Q92889 TTC39DP-201ENST00000416781 1688 ntBASIC6.17□□□□□ -1.42
ERCC4Q92889 VN2R3P-201ENST00000422626 1412 ntBASIC6.16□□□□□ -1.42
ERCC4Q92889 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
ERCC4Q92889 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
ERCC4Q92889 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC6.16□□□□□ -1.42
ERCC4Q92889 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
ERCC4Q92889 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
ERCC4Q92889 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
ERCC4Q92889 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
ERCC4Q92889 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC6.16□□□□□ -1.42
ERCC4Q92889 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
ERCC4Q92889 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC6.16□□□□□ -1.42
ERCC4Q92889 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC6.16□□□□□ -1.42
ERCC4Q92889 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.16□□□□□ -1.42
ERCC4Q92889 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
ERCC4Q92889 RNA5SP27-201ENST00000363839 119 ntBASIC6.16□□□□□ -1.42
ERCC4Q92889 RNA5SP131-201ENST00000365452 119 ntBASIC6.16□□□□□ -1.42
ERCC4Q92889 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
ERCC4Q92889 RNU6-549P-201ENST00000384433 107 ntBASIC6.16□□□□□ -1.42
ERCC4Q92889 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC6.16□□□□□ -1.42
ERCC4Q92889 AC027644.1-201ENST00000419595 298 ntBASIC6.16□□□□□ -1.42
ERCC4Q92889 PTP4A1P5-201ENST00000420305 455 ntBASIC6.16□□□□□ -1.42
ERCC4Q92889 NPM1P22-201ENST00000427761 952 ntBASIC6.16□□□□□ -1.42
ERCC4Q92889 AL022331.1-201ENST00000429025 477 ntBASIC6.16□□□□□ -1.42
ERCC4Q92889 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
ERCC4Q92889 COX7BP2-201ENST00000437976 242 ntBASIC6.16□□□□□ -1.42
ERCC4Q92889 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC6.16□□□□□ -1.42
ERCC4Q92889 AC092393.1-201ENST00000439625 742 ntBASIC6.16□□□□□ -1.42
ERCC4Q92889 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC6.16□□□□□ -1.42
ERCC4Q92889 EEF1B2P5-201ENST00000444820 548 ntBASIC6.16□□□□□ -1.42
ERCC4Q92889 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms