Protein–RNA interactions for Protein: Q8NEB9

PIK3C3, Phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3Q8NEB9 DYNLL1P6-201ENST00000503440 264 ntBASIC5.52□□□□□ -1.53
PIK3C3Q8NEB9 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.52□□□□□ -1.53
PIK3C3Q8NEB9 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.52□□□□□ -1.53
PIK3C3Q8NEB9 RPL7L1P4-201ENST00000513004 707 ntBASIC5.52□□□□□ -1.53
PIK3C3Q8NEB9 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.52□□□□□ -1.53
PIK3C3Q8NEB9 AC116917.1-201ENST00000520558 305 ntBASIC5.52□□□□□ -1.53
PIK3C3Q8NEB9 AC106038.2-201ENST00000520706 568 ntBASIC5.52□□□□□ -1.53
PIK3C3Q8NEB9 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.52□□□□□ -1.53
PIK3C3Q8NEB9 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PIK3C3Q8NEB9 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.52□□□□□ -1.53
PIK3C3Q8NEB9 AP000873.5-201ENST00000533906 236 ntBASIC5.52□□□□□ -1.53
PIK3C3Q8NEB9 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.52□□□□□ -1.53
PIK3C3Q8NEB9 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC5.52□□□□□ -1.53
PIK3C3Q8NEB9 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
PIK3C3Q8NEB9 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.52□□□□□ -1.53
PIK3C3Q8NEB9 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.52□□□□□ -1.53
PIK3C3Q8NEB9 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC5.52□□□□□ -1.53
PIK3C3Q8NEB9 AC121758.1-202ENST00000556917 658 ntBASIC5.52□□□□□ -1.53
PIK3C3Q8NEB9 AC006362.1-201ENST00000567392 174 ntBASIC5.52□□□□□ -1.53
PIK3C3Q8NEB9 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.52□□□□□ -1.53
PIK3C3Q8NEB9 AC138207.8-204ENST00000579588 527 ntBASIC5.52□□□□□ -1.53
PIK3C3Q8NEB9 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC5.52□□□□□ -1.53
PIK3C3Q8NEB9 MIR4660-201ENST00000583549 74 ntBASIC5.52□□□□□ -1.53
PIK3C3Q8NEB9 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.52□□□□□ -1.53
PIK3C3Q8NEB9 AL390838.2-201ENST00000602394 274 ntBASIC5.52□□□□□ -1.53
PIK3C3Q8NEB9 AL021997.1-201ENST00000605757 193 ntBASIC5.52□□□□□ -1.53
PIK3C3Q8NEB9 AL135786.2-201ENST00000608422 615 ntBASIC5.52□□□□□ -1.53
PIK3C3Q8NEB9 AC008083.4-201ENST00000615076 444 ntBASIC5.52□□□□□ -1.53
PIK3C3Q8NEB9 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC5.52□□□□□ -1.53
PIK3C3Q8NEB9 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.52□□□□□ -1.53
PIK3C3Q8NEB9 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.52□□□□□ -1.53
PIK3C3Q8NEB9 AL353743.4-201ENST00000422653 1547 ntBASIC5.52□□□□□ -1.53
PIK3C3Q8NEB9 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
PIK3C3Q8NEB9 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PIK3C3Q8NEB9 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.52□□□□□ -1.53
PIK3C3Q8NEB9 AC093311.1-201ENST00000506586 2021 ntBASIC5.52□□□□□ -1.53
PIK3C3Q8NEB9 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PIK3C3Q8NEB9 Z99496.1-201ENST00000469424 1477 ntBASIC5.51□□□□□ -1.53
PIK3C3Q8NEB9 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.51□□□□□ -1.53
PIK3C3Q8NEB9 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
PIK3C3Q8NEB9 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PIK3C3Q8NEB9 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
PIK3C3Q8NEB9 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
PIK3C3Q8NEB9 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
PIK3C3Q8NEB9 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PIK3C3Q8NEB9 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.51□□□□□ -1.53
PIK3C3Q8NEB9 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
PIK3C3Q8NEB9 AL672167.1-206ENST00000356293 943 ntBASIC5.51□□□□□ -1.53
PIK3C3Q8NEB9 RNU6-500P-201ENST00000362349 107 ntBASIC5.51□□□□□ -1.53
PIK3C3Q8NEB9 RN7SKP185-201ENST00000362813 326 ntBASIC5.51□□□□□ -1.53
PIK3C3Q8NEB9 Y_RNA.311-201ENST00000365068 96 ntBASIC5.51□□□□□ -1.53
PIK3C3Q8NEB9 MIR188-201ENST00000385034 86 ntBASIC5.51□□□□□ -1.53
PIK3C3Q8NEB9 AC087752.1-201ENST00000391360 558 ntBASIC5.51□□□□□ -1.53
PIK3C3Q8NEB9 RN7SKP108-201ENST00000411367 328 ntBASIC5.51□□□□□ -1.53
PIK3C3Q8NEB9 AL096829.1-201ENST00000413677 457 ntBASIC5.51□□□□□ -1.53
PIK3C3Q8NEB9 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.51□□□□□ -1.53
PIK3C3Q8NEB9 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.51□□□□□ -1.53
PIK3C3Q8NEB9 OFD1P2Y-201ENST00000421895 1149 ntBASIC5.51□□□□□ -1.53
PIK3C3Q8NEB9 RPL12P12-201ENST00000424633 501 ntBASIC5.51□□□□□ -1.53
PIK3C3Q8NEB9 AL009174.1-201ENST00000426577 416 ntBASIC5.51□□□□□ -1.53
PIK3C3Q8NEB9 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.51□□□□□ -1.53
PIK3C3Q8NEB9 BLOC1S2P1-201ENST00000428431 301 ntBASIC5.51□□□□□ -1.53
PIK3C3Q8NEB9 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.51□□□□□ -1.53
PIK3C3Q8NEB9 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PIK3C3Q8NEB9 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC5.51□□□□□ -1.53
PIK3C3Q8NEB9 RPL21P110-201ENST00000433345 446 ntBASIC5.51□□□□□ -1.53
PIK3C3Q8NEB9 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC5.51□□□□□ -1.53
PIK3C3Q8NEB9 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.51□□□□□ -1.53
PIK3C3Q8NEB9 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC5.51□□□□□ -1.53
PIK3C3Q8NEB9 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.51□□□□□ -1.53
PIK3C3Q8NEB9 MTCO3P11-201ENST00000455103 774 ntBASIC5.51□□□□□ -1.53
PIK3C3Q8NEB9 RNU7-27P-201ENST00000459281 62 ntBASIC5.51□□□□□ -1.53
PIK3C3Q8NEB9 AL603882.1-201ENST00000463059 681 ntBASIC5.51□□□□□ -1.53
PIK3C3Q8NEB9 AL024509.2-201ENST00000493462 493 ntBASIC5.51□□□□□ -1.53
PIK3C3Q8NEB9 RN7SL362P-201ENST00000494228 267 ntBASIC5.51□□□□□ -1.53
PIK3C3Q8NEB9 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.51□□□□□ -1.53
PIK3C3Q8NEB9 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC5.51□□□□□ -1.53
PIK3C3Q8NEB9 AC091965.2-201ENST00000512324 613 ntBASIC5.51□□□□□ -1.53
PIK3C3Q8NEB9 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC5.51□□□□□ -1.53
PIK3C3Q8NEB9 RNA5SP230-201ENST00000517039 122 ntBASIC5.51□□□□□ -1.53
PIK3C3Q8NEB9 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PIK3C3Q8NEB9 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.51□□□□□ -1.53
PIK3C3Q8NEB9 AL121594.2-201ENST00000541658 472 ntBASIC5.51□□□□□ -1.53
PIK3C3Q8NEB9 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC5.51□□□□□ -1.53
PIK3C3Q8NEB9 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.51□□□□□ -1.53
PIK3C3Q8NEB9 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC5.51□□□□□ -1.53
PIK3C3Q8NEB9 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PIK3C3Q8NEB9 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC5.51□□□□□ -1.53
PIK3C3Q8NEB9 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.51□□□□□ -1.53
PIK3C3Q8NEB9 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.51□□□□□ -1.53
PIK3C3Q8NEB9 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.51□□□□□ -1.53
PIK3C3Q8NEB9 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.51□□□□□ -1.53
PIK3C3Q8NEB9 AC012435.1-202ENST00000568772 240 ntBASIC5.51□□□□□ -1.53
PIK3C3Q8NEB9 BPTFP1-201ENST00000579209 492 ntBASIC5.51□□□□□ -1.53
PIK3C3Q8NEB9 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC5.51□□□□□ -1.53
PIK3C3Q8NEB9 MIR3611-201ENST00000584484 83 ntBASIC5.51□□□□□ -1.53
PIK3C3Q8NEB9 AC090525.3-201ENST00000605601 189 ntBASIC5.51□□□□□ -1.53
PIK3C3Q8NEB9 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC5.51□□□□□ -1.53
PIK3C3Q8NEB9 uc_338.26-201ENST00000612659 160 ntBASIC5.51□□□□□ -1.53
PIK3C3Q8NEB9 AC015540.1-201ENST00000615828 501 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms