Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 RNU2-50P-201ENST00000410494 143 ntBASIC3.81□□□□□ -1.8
ZNF439Q8NDP4 SEPT7P8-201ENST00000413308 775 ntBASIC3.81□□□□□ -1.8
ZNF439Q8NDP4 AC140479.3-201ENST00000418944 1126 ntBASIC3.81□□□□□ -1.8
ZNF439Q8NDP4 RPS26P13-201ENST00000419030 330 ntBASIC3.81□□□□□ -1.8
ZNF439Q8NDP4 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC3.81□□□□□ -1.8
ZNF439Q8NDP4 AL353597.2-202ENST00000434901 373 ntBASIC3.81□□□□□ -1.8
ZNF439Q8NDP4 VN1R54P-201ENST00000435210 1049 ntBASIC3.81□□□□□ -1.8
ZNF439Q8NDP4 AC005154.2-201ENST00000438110 379 ntBASIC3.81□□□□□ -1.8
ZNF439Q8NDP4 AC133473.1-201ENST00000455173 299 ntBASIC3.81□□□□□ -1.8
ZNF439Q8NDP4 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.81□□□□□ -1.8
ZNF439Q8NDP4 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ZNF439Q8NDP4 MTHFD2P4-201ENST00000515074 1025 ntBASIC3.81□□□□□ -1.8
ZNF439Q8NDP4 RNU2-30P-201ENST00000516209 141 ntBASIC3.81□□□□□ -1.8
ZNF439Q8NDP4 RN7SKP276-201ENST00000516242 268 ntBASIC3.81□□□□□ -1.8
ZNF439Q8NDP4 LECT2-205ENST00000522943 574 ntTSL 3 BASIC3.81□□□□□ -1.8
ZNF439Q8NDP4 CARD16-203ENST00000525374 503 ntTSL 3 BASIC3.81□□□□□ -1.8
ZNF439Q8NDP4 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC3.81□□□□□ -1.8
ZNF439Q8NDP4 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC3.81□□□□□ -1.8
ZNF439Q8NDP4 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC3.81□□□□□ -1.8
ZNF439Q8NDP4 RN7SL652P-201ENST00000577769 300 ntBASIC3.81□□□□□ -1.8
ZNF439Q8NDP4 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC3.81□□□□□ -1.8
ZNF439Q8NDP4 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.81□□□□□ -1.8
ZNF439Q8NDP4 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.81□□□□□ -1.8
ZNF439Q8NDP4 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC3.81□□□□□ -1.8
ZNF439Q8NDP4 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ZNF439Q8NDP4 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
ZNF439Q8NDP4 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC3.81□□□□□ -1.8
ZNF439Q8NDP4 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC3.81□□□□□ -1.8
ZNF439Q8NDP4 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
ZNF439Q8NDP4 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC3.81□□□□□ -1.8
ZNF439Q8NDP4 AL355852.1-201ENST00000454081 1771 ntBASIC3.81□□□□□ -1.8
ZNF439Q8NDP4 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.81□□□□□ -1.8
ZNF439Q8NDP4 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
ZNF439Q8NDP4 AC125257.1-201ENST00000560400 2930 ntBASIC3.81□□□□□ -1.8
ZNF439Q8NDP4 AC132825.1-201ENST00000463573 2247 ntBASIC3.8□□□□□ -1.8
ZNF439Q8NDP4 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
ZNF439Q8NDP4 SDAD1P1-202ENST00000524156 2051 ntBASIC3.8□□□□□ -1.8
ZNF439Q8NDP4 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
ZNF439Q8NDP4 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
ZNF439Q8NDP4 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC3.8□□□□□ -1.8
ZNF439Q8NDP4 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
ZNF439Q8NDP4 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC3.8□□□□□ -1.8
ZNF439Q8NDP4 AL672167.1-203ENST00000641299 2975 ntBASIC3.8□□□□□ -1.8
ZNF439Q8NDP4 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
ZNF439Q8NDP4 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC3.8□□□□□ -1.8
ZNF439Q8NDP4 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
ZNF439Q8NDP4 MIR195-201ENST00000385194 87 ntBASIC3.8□□□□□ -1.8
ZNF439Q8NDP4 SNORD96B-201ENST00000386148 79 ntBASIC3.8□□□□□ -1.8
ZNF439Q8NDP4 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
ZNF439Q8NDP4 LAP3P1-201ENST00000403648 294 ntBASIC3.8□□□□□ -1.8
ZNF439Q8NDP4 HDGFP1-201ENST00000405943 252 ntBASIC3.8□□□□□ -1.8
ZNF439Q8NDP4 RN7SKP267-201ENST00000410381 285 ntBASIC3.8□□□□□ -1.8
ZNF439Q8NDP4 CEACAMP8-201ENST00000413902 580 ntBASIC3.8□□□□□ -1.8
ZNF439Q8NDP4 AL158073.1-201ENST00000426848 1104 ntBASIC3.8□□□□□ -1.8
ZNF439Q8NDP4 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC3.8□□□□□ -1.8
ZNF439Q8NDP4 AC016831.4-201ENST00000438302 307 ntBASIC3.8□□□□□ -1.8
ZNF439Q8NDP4 AL035551.1-201ENST00000446931 348 ntBASIC3.8□□□□□ -1.8
ZNF439Q8NDP4 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC3.8□□□□□ -1.8
ZNF439Q8NDP4 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC3.8□□□□□ -1.8
ZNF439Q8NDP4 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC3.8□□□□□ -1.8
ZNF439Q8NDP4 RPS3AP41-201ENST00000462701 778 ntBASIC3.8□□□□□ -1.8
ZNF439Q8NDP4 RN7SL817P-201ENST00000480777 288 ntBASIC3.8□□□□□ -1.8
ZNF439Q8NDP4 NDUFB5P1-201ENST00000508134 564 ntBASIC3.8□□□□□ -1.8
ZNF439Q8NDP4 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC3.8□□□□□ -1.8
ZNF439Q8NDP4 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC3.8□□□□□ -1.8
ZNF439Q8NDP4 SOX5P1-201ENST00000524155 1127 ntBASIC3.8□□□□□ -1.8
ZNF439Q8NDP4 DEFB109D-201ENST00000529497 240 ntBASIC3.8□□□□□ -1.8
ZNF439Q8NDP4 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC3.8□□□□□ -1.8
ZNF439Q8NDP4 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC3.8□□□□□ -1.8
ZNF439Q8NDP4 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC3.8□□□□□ -1.8
ZNF439Q8NDP4 AL121839.1-201ENST00000556233 1185 ntBASIC3.8□□□□□ -1.8
ZNF439Q8NDP4 AC016180.1-201ENST00000567945 403 ntBASIC3.8□□□□□ -1.8
ZNF439Q8NDP4 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC3.8□□□□□ -1.8
ZNF439Q8NDP4 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
ZNF439Q8NDP4 AC005084.1-201ENST00000605160 304 ntBASIC3.8□□□□□ -1.8
ZNF439Q8NDP4 NAA60-237ENST00000615865 326 ntTSL 5 BASIC3.8□□□□□ -1.8
ZNF439Q8NDP4 SNX18P1Y-201ENST00000616231 511 ntBASIC3.8□□□□□ -1.8
ZNF439Q8NDP4 AC090510.2-201ENST00000617465 629 ntBASIC3.8□□□□□ -1.8
ZNF439Q8NDP4 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC3.8□□□□□ -1.8
ZNF439Q8NDP4 AC005086.4-201ENST00000623065 213 ntBASIC3.8□□□□□ -1.8
ZNF439Q8NDP4 AP006248.2-201ENST00000623309 592 ntBASIC3.8□□□□□ -1.8
ZNF439Q8NDP4 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC3.8□□□□□ -1.8
ZNF439Q8NDP4 AC055839.1-201ENST00000634467 498 ntBASIC3.8□□□□□ -1.8
ZNF439Q8NDP4 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.8□□□□□ -1.8
ZNF439Q8NDP4 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.8□□□□□ -1.8
ZNF439Q8NDP4 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
ZNF439Q8NDP4 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
ZNF439Q8NDP4 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
ZNF439Q8NDP4 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
ZNF439Q8NDP4 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
ZNF439Q8NDP4 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
ZNF439Q8NDP4 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
ZNF439Q8NDP4 AC131971.1-201ENST00000332881 1482 ntBASIC3.79□□□□□ -1.8
ZNF439Q8NDP4 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
ZNF439Q8NDP4 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
ZNF439Q8NDP4 CARF-203ENST00000414439 2099 ntTSL 2 BASIC3.79□□□□□ -1.8
ZNF439Q8NDP4 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.79□□□□□ -1.8
ZNF439Q8NDP4 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
ZNF439Q8NDP4 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
ZNF439Q8NDP4 RNA5SP372-201ENST00000390836 115 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms