Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.3□□□□□ -1.72
C9orf40Q8IXQ3 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.3□□□□□ -1.72
C9orf40Q8IXQ3 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.3□□□□□ -1.72
C9orf40Q8IXQ3 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
C9orf40Q8IXQ3 MIR421-201ENST00000365696 85 ntBASIC4.3□□□□□ -1.72
C9orf40Q8IXQ3 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
C9orf40Q8IXQ3 SNORD65-201ENST00000391079 73 ntBASIC4.3□□□□□ -1.72
C9orf40Q8IXQ3 RNA5SP105-201ENST00000391123 113 ntBASIC4.3□□□□□ -1.72
C9orf40Q8IXQ3 RNA5SP397-201ENST00000391323 118 ntBASIC4.3□□□□□ -1.72
C9orf40Q8IXQ3 RPL26P29-201ENST00000415623 438 ntBASIC4.3□□□□□ -1.72
C9orf40Q8IXQ3 AC119751.6-201ENST00000416712 186 ntBASIC4.3□□□□□ -1.72
C9orf40Q8IXQ3 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
C9orf40Q8IXQ3 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.3□□□□□ -1.72
C9orf40Q8IXQ3 RPL36AP10-201ENST00000421785 322 ntBASIC4.3□□□□□ -1.72
C9orf40Q8IXQ3 AC106901.1-201ENST00000425086 698 ntBASIC4.3□□□□□ -1.72
C9orf40Q8IXQ3 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.3□□□□□ -1.72
C9orf40Q8IXQ3 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.3□□□□□ -1.72
C9orf40Q8IXQ3 AL138878.2-201ENST00000440581 1241 ntBASIC4.3□□□□□ -1.72
C9orf40Q8IXQ3 AC011753.3-201ENST00000443436 406 ntBASIC4.3□□□□□ -1.72
C9orf40Q8IXQ3 TDGF1P1-201ENST00000445734 527 ntBASIC4.3□□□□□ -1.72
C9orf40Q8IXQ3 AL157884.3-201ENST00000448273 1184 ntBASIC4.3□□□□□ -1.72
C9orf40Q8IXQ3 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.3□□□□□ -1.72
C9orf40Q8IXQ3 EIF2S2P4-201ENST00000461070 984 ntBASIC4.3□□□□□ -1.72
C9orf40Q8IXQ3 AC104763.1-201ENST00000475274 360 ntBASIC4.3□□□□□ -1.72
C9orf40Q8IXQ3 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.3□□□□□ -1.72
C9orf40Q8IXQ3 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.3□□□□□ -1.72
C9orf40Q8IXQ3 AC007016.1-201ENST00000512110 244 ntBASIC4.3□□□□□ -1.72
C9orf40Q8IXQ3 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.3□□□□□ -1.72
C9orf40Q8IXQ3 AC067904.2-201ENST00000517322 1283 ntBASIC4.3□□□□□ -1.72
C9orf40Q8IXQ3 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.3□□□□□ -1.72
C9orf40Q8IXQ3 AC087272.1-201ENST00000523624 533 ntBASIC4.3□□□□□ -1.72
C9orf40Q8IXQ3 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.3□□□□□ -1.72
C9orf40Q8IXQ3 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.3□□□□□ -1.72
C9orf40Q8IXQ3 MIR4330-201ENST00000579077 105 ntBASIC4.3□□□□□ -1.72
C9orf40Q8IXQ3 FAM106CP-201ENST00000582212 507 ntBASIC4.3□□□□□ -1.72
C9orf40Q8IXQ3 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.3□□□□□ -1.72
C9orf40Q8IXQ3 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.3□□□□□ -1.72
C9orf40Q8IXQ3 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.3□□□□□ -1.72
C9orf40Q8IXQ3 AC015802.5-201ENST00000607478 399 ntBASIC4.3□□□□□ -1.72
C9orf40Q8IXQ3 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.3□□□□□ -1.72
C9orf40Q8IXQ3 MIR6820-201ENST00000611508 62 ntBASIC4.3□□□□□ -1.72
C9orf40Q8IXQ3 uc_338.18-201ENST00000615451 175 ntBASIC4.3□□□□□ -1.72
C9orf40Q8IXQ3 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.3□□□□□ -1.72
C9orf40Q8IXQ3 AC105105.5-201ENST00000622635 1294 ntBASIC4.3□□□□□ -1.72
C9orf40Q8IXQ3 AL359757.1-201ENST00000623176 255 ntBASIC4.3□□□□□ -1.72
C9orf40Q8IXQ3 AC021106.3-201ENST00000623925 531 ntBASIC4.3□□□□□ -1.72
C9orf40Q8IXQ3 ZNF137P-201ENST00000456718 1920 ntBASIC4.3□□□□□ -1.72
C9orf40Q8IXQ3 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
C9orf40Q8IXQ3 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.3□□□□□ -1.72
C9orf40Q8IXQ3 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
C9orf40Q8IXQ3 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
C9orf40Q8IXQ3 AC135352.1-201ENST00000506173 1418 ntBASIC4.29□□□□□ -1.72
C9orf40Q8IXQ3 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
C9orf40Q8IXQ3 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
C9orf40Q8IXQ3 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
C9orf40Q8IXQ3 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.29□□□□□ -1.72
C9orf40Q8IXQ3 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.29□□□□□ -1.72
C9orf40Q8IXQ3 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
C9orf40Q8IXQ3 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
C9orf40Q8IXQ3 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
C9orf40Q8IXQ3 SNORD113.2-201ENST00000364166 89 ntBASIC4.29□□□□□ -1.72
C9orf40Q8IXQ3 SNORA71.2-201ENST00000364941 134 ntBASIC4.29□□□□□ -1.72
C9orf40Q8IXQ3 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
C9orf40Q8IXQ3 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
C9orf40Q8IXQ3 Z98745.1-201ENST00000402553 494 ntBASIC4.29□□□□□ -1.72
C9orf40Q8IXQ3 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
C9orf40Q8IXQ3 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.29□□□□□ -1.72
C9orf40Q8IXQ3 AC092570.3-201ENST00000420113 693 ntBASIC4.29□□□□□ -1.72
C9orf40Q8IXQ3 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.29□□□□□ -1.72
C9orf40Q8IXQ3 FABP7P2-201ENST00000429946 379 ntBASIC4.29□□□□□ -1.72
C9orf40Q8IXQ3 RPS26P4-201ENST00000431743 355 ntBASIC4.29□□□□□ -1.72
C9orf40Q8IXQ3 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.29□□□□□ -1.72
C9orf40Q8IXQ3 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.29□□□□□ -1.72
C9orf40Q8IXQ3 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
C9orf40Q8IXQ3 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
C9orf40Q8IXQ3 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.29□□□□□ -1.72
C9orf40Q8IXQ3 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
C9orf40Q8IXQ3 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.29□□□□□ -1.72
C9orf40Q8IXQ3 AC098799.3-201ENST00000506095 438 ntBASIC4.29□□□□□ -1.72
C9orf40Q8IXQ3 OR5AN2P-201ENST00000534535 896 ntBASIC4.29□□□□□ -1.72
C9orf40Q8IXQ3 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.29□□□□□ -1.72
C9orf40Q8IXQ3 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.29□□□□□ -1.72
C9orf40Q8IXQ3 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.29□□□□□ -1.72
C9orf40Q8IXQ3 RN7SL52P-201ENST00000584271 284 ntBASIC4.29□□□□□ -1.72
C9orf40Q8IXQ3 AC119501.1-201ENST00000603646 475 ntBASIC4.29□□□□□ -1.72
C9orf40Q8IXQ3 AL133338.2-201ENST00000604292 736 ntBASIC4.29□□□□□ -1.72
C9orf40Q8IXQ3 AC007620.3-201ENST00000608131 497 ntBASIC4.29□□□□□ -1.72
C9orf40Q8IXQ3 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.29□□□□□ -1.72
C9orf40Q8IXQ3 AL162233.1-201ENST00000620014 944 ntBASIC4.29□□□□□ -1.72
C9orf40Q8IXQ3 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
C9orf40Q8IXQ3 SALL4P2-201ENST00000423288 2910 ntBASIC4.29□□□□□ -1.72
C9orf40Q8IXQ3 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
C9orf40Q8IXQ3 KARSP3-201ENST00000571212 1504 ntBASIC4.29□□□□□ -1.72
C9orf40Q8IXQ3 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
C9orf40Q8IXQ3 AP000542.2-201ENST00000623199 6179 ntBASIC4.29□□□□□ -1.72
C9orf40Q8IXQ3 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
C9orf40Q8IXQ3 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
C9orf40Q8IXQ3 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
C9orf40Q8IXQ3 UGT2B26P-201ENST00000508672 1613 ntBASIC4.28□□□□□ -1.72
C9orf40Q8IXQ3 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms