Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AC037471.2-201ENST00000564941 598 ntBASIC5.89□□□□□ -1.47
ATG4DQ86TL0 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC5.89□□□□□ -1.47
ATG4DQ86TL0 AC092718.4-201ENST00000566639 716 ntBASIC5.89□□□□□ -1.47
ATG4DQ86TL0 MIR3157-201ENST00000578688 85 ntBASIC5.89□□□□□ -1.47
ATG4DQ86TL0 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC5.89□□□□□ -1.47
ATG4DQ86TL0 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC5.89□□□□□ -1.47
ATG4DQ86TL0 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.89□□□□□ -1.47
ATG4DQ86TL0 VN1R80P-201ENST00000597126 338 ntBASIC5.89□□□□□ -1.47
ATG4DQ86TL0 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.89□□□□□ -1.47
ATG4DQ86TL0 AL132822.1-201ENST00000617063 513 ntBASIC5.89□□□□□ -1.47
ATG4DQ86TL0 AL603758.1-201ENST00000618654 241 ntBASIC5.89□□□□□ -1.47
ATG4DQ86TL0 AC015722.2-201ENST00000622210 551 ntBASIC5.89□□□□□ -1.47
ATG4DQ86TL0 AL158801.5-201ENST00000623123 465 ntBASIC5.89□□□□□ -1.47
ATG4DQ86TL0 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC5.89□□□□□ -1.47
ATG4DQ86TL0 TTK-211ENST00000627129 240 ntTSL 5 BASIC5.89□□□□□ -1.47
ATG4DQ86TL0 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC5.89□□□□□ -1.47
ATG4DQ86TL0 AL132640.3-201ENST00000630473 177 ntBASIC5.89□□□□□ -1.47
ATG4DQ86TL0 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC5.89□□□□□ -1.47
ATG4DQ86TL0 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ATG4DQ86TL0 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
ATG4DQ86TL0 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ATG4DQ86TL0 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
ATG4DQ86TL0 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
ATG4DQ86TL0 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ATG4DQ86TL0 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ATG4DQ86TL0 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ATG4DQ86TL0 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.89□□□□□ -1.47
ATG4DQ86TL0 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.89□□□□□ -1.47
ATG4DQ86TL0 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
ATG4DQ86TL0 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ATG4DQ86TL0 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC5.89□□□□□ -1.47
ATG4DQ86TL0 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC5.88□□□□□ -1.47
ATG4DQ86TL0 CREM-217ENST00000439705 2306 ntTSL 5 BASIC5.88□□□□□ -1.47
ATG4DQ86TL0 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC5.88□□□□□ -1.47
ATG4DQ86TL0 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5.88□□□□□ -1.47
ATG4DQ86TL0 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
ATG4DQ86TL0 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC5.88□□□□□ -1.47
ATG4DQ86TL0 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
ATG4DQ86TL0 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
ATG4DQ86TL0 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC5.88□□□□□ -1.47
ATG4DQ86TL0 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
ATG4DQ86TL0 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
ATG4DQ86TL0 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
ATG4DQ86TL0 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
ATG4DQ86TL0 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
ATG4DQ86TL0 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
ATG4DQ86TL0 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
ATG4DQ86TL0 OR11H13P-201ENST00000359695 979 ntBASIC5.88□□□□□ -1.47
ATG4DQ86TL0 Y_RNA.72-201ENST00000362894 103 ntBASIC5.88□□□□□ -1.47
ATG4DQ86TL0 RN7SKP171-201ENST00000364417 303 ntBASIC5.88□□□□□ -1.47
ATG4DQ86TL0 SNRPEP2-201ENST00000397592 279 ntBASIC5.88□□□□□ -1.47
ATG4DQ86TL0 AL391419.1-201ENST00000398901 1275 ntBASIC5.88□□□□□ -1.47
ATG4DQ86TL0 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5.88□□□□□ -1.47
ATG4DQ86TL0 AC109780.2-201ENST00000413467 845 ntBASIC5.88□□□□□ -1.47
ATG4DQ86TL0 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.88□□□□□ -1.47
ATG4DQ86TL0 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.88□□□□□ -1.47
ATG4DQ86TL0 NENFP1-201ENST00000419476 466 ntBASIC5.88□□□□□ -1.47
ATG4DQ86TL0 NCOR1P3-201ENST00000420479 303 ntBASIC5.88□□□□□ -1.47
ATG4DQ86TL0 AKR1B10P1-201ENST00000425765 942 ntBASIC5.88□□□□□ -1.47
ATG4DQ86TL0 AL035410.1-201ENST00000427409 427 ntBASIC5.88□□□□□ -1.47
ATG4DQ86TL0 FO393419.3-201ENST00000428741 282 ntBASIC5.88□□□□□ -1.47
ATG4DQ86TL0 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC5.88□□□□□ -1.47
ATG4DQ86TL0 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC5.88□□□□□ -1.47
ATG4DQ86TL0 AC128677.1-201ENST00000436016 442 ntBASIC5.88□□□□□ -1.47
ATG4DQ86TL0 UBE2FP3-201ENST00000436366 524 ntBASIC5.88□□□□□ -1.47
ATG4DQ86TL0 LINC00328-2P-201ENST00000436585 219 ntBASIC5.88□□□□□ -1.47
ATG4DQ86TL0 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC5.88□□□□□ -1.47
ATG4DQ86TL0 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC5.88□□□□□ -1.47
ATG4DQ86TL0 AL831737.1-201ENST00000441288 271 ntBASIC5.88□□□□□ -1.47
ATG4DQ86TL0 AC097499.1-201ENST00000444277 208 ntBASIC5.88□□□□□ -1.47
ATG4DQ86TL0 AC074386.1-201ENST00000476560 767 ntBASIC5.88□□□□□ -1.47
ATG4DQ86TL0 AC098818.1-201ENST00000478593 252 ntBASIC5.88□□□□□ -1.47
ATG4DQ86TL0 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC5.88□□□□□ -1.47
ATG4DQ86TL0 EIF3LP3-201ENST00000495197 822 ntBASIC5.88□□□□□ -1.47
ATG4DQ86TL0 AC022206.1-201ENST00000495947 347 ntBASIC5.88□□□□□ -1.47
ATG4DQ86TL0 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.88□□□□□ -1.47
ATG4DQ86TL0 AC093870.1-201ENST00000506837 213 ntBASIC5.88□□□□□ -1.47
ATG4DQ86TL0 AC093664.1-201ENST00000511779 289 ntBASIC5.88□□□□□ -1.47
ATG4DQ86TL0 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.88□□□□□ -1.47
ATG4DQ86TL0 Y_RNA.693-201ENST00000516641 110 ntBASIC5.88□□□□□ -1.47
ATG4DQ86TL0 RNU6-264P-201ENST00000517134 104 ntBASIC5.88□□□□□ -1.47
ATG4DQ86TL0 AC105029.1-201ENST00000520250 669 ntBASIC5.88□□□□□ -1.47
ATG4DQ86TL0 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.88□□□□□ -1.47
ATG4DQ86TL0 IGHV1-14-201ENST00000523391 241 ntBASIC5.88□□□□□ -1.47
ATG4DQ86TL0 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.88□□□□□ -1.47
ATG4DQ86TL0 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.88□□□□□ -1.47
ATG4DQ86TL0 AC007424.1-203ENST00000554613 687 ntBASIC5.88□□□□□ -1.47
ATG4DQ86TL0 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
ATG4DQ86TL0 AP001004.1-201ENST00000582468 324 ntBASIC5.88□□□□□ -1.47
ATG4DQ86TL0 MIR3171-201ENST00000584270 74 ntBASIC5.88□□□□□ -1.47
ATG4DQ86TL0 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC5.88□□□□□ -1.47
ATG4DQ86TL0 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC5.88□□□□□ -1.47
ATG4DQ86TL0 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.88□□□□□ -1.47
ATG4DQ86TL0 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC5.88□□□□□ -1.47
ATG4DQ86TL0 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.88□□□□□ -1.47
ATG4DQ86TL0 AC008737.2-201ENST00000599446 118 ntBASIC5.88□□□□□ -1.47
ATG4DQ86TL0 AC004805.3-201ENST00000603178 310 ntBASIC5.88□□□□□ -1.47
ATG4DQ86TL0 AC012175.1-201ENST00000603755 531 ntBASIC5.88□□□□□ -1.47
ATG4DQ86TL0 AL136363.1-201ENST00000605349 337 ntBASIC5.88□□□□□ -1.47
ATG4DQ86TL0 AC019257.2-201ENST00000605539 497 ntBASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms