Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.54□□□□□ -1.68
NHLRC1Q6VVB1 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NHLRC1Q6VVB1 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NHLRC1Q6VVB1 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NHLRC1Q6VVB1 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NHLRC1Q6VVB1 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
NHLRC1Q6VVB1 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.54□□□□□ -1.68
NHLRC1Q6VVB1 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NHLRC1Q6VVB1 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
NHLRC1Q6VVB1 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NHLRC1Q6VVB1 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.54□□□□□ -1.68
NHLRC1Q6VVB1 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NHLRC1Q6VVB1 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NHLRC1Q6VVB1 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.53□□□□□ -1.68
NHLRC1Q6VVB1 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
NHLRC1Q6VVB1 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.53□□□□□ -1.68
NHLRC1Q6VVB1 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
NHLRC1Q6VVB1 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
NHLRC1Q6VVB1 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NHLRC1Q6VVB1 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
NHLRC1Q6VVB1 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NHLRC1Q6VVB1 AC011155.1-201ENST00000316512 456 ntBASIC4.53□□□□□ -1.68
NHLRC1Q6VVB1 MIR16-2-201ENST00000362117 81 ntBASIC4.53□□□□□ -1.68
NHLRC1Q6VVB1 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
NHLRC1Q6VVB1 AC019155.1-201ENST00000382242 574 ntBASIC4.53□□□□□ -1.68
NHLRC1Q6VVB1 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
NHLRC1Q6VVB1 AL359643.1-201ENST00000404109 423 ntBASIC4.53□□□□□ -1.68
NHLRC1Q6VVB1 RN7SKP273-201ENST00000411392 314 ntBASIC4.53□□□□□ -1.68
NHLRC1Q6VVB1 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.53□□□□□ -1.68
NHLRC1Q6VVB1 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.53□□□□□ -1.68
NHLRC1Q6VVB1 ETF1P3-201ENST00000430422 1160 ntBASIC4.53□□□□□ -1.68
NHLRC1Q6VVB1 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.53□□□□□ -1.68
NHLRC1Q6VVB1 MTND6P18-201ENST00000439477 513 ntBASIC4.53□□□□□ -1.68
NHLRC1Q6VVB1 EEF1A1P1-201ENST00000447052 739 ntBASIC4.53□□□□□ -1.68
NHLRC1Q6VVB1 BTF3P6-201ENST00000448054 499 ntBASIC4.53□□□□□ -1.68
NHLRC1Q6VVB1 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.53□□□□□ -1.68
NHLRC1Q6VVB1 AL935212.3-201ENST00000450729 284 ntBASIC4.53□□□□□ -1.68
NHLRC1Q6VVB1 AC073073.1-201ENST00000493920 463 ntBASIC4.53□□□□□ -1.68
NHLRC1Q6VVB1 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.53□□□□□ -1.68
NHLRC1Q6VVB1 AC112518.2-201ENST00000508565 425 ntBASIC4.53□□□□□ -1.68
NHLRC1Q6VVB1 RNU6-1102P-201ENST00000516149 96 ntBASIC4.53□□□□□ -1.68
NHLRC1Q6VVB1 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.53□□□□□ -1.68
NHLRC1Q6VVB1 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.53□□□□□ -1.68
NHLRC1Q6VVB1 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.53□□□□□ -1.68
NHLRC1Q6VVB1 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.53□□□□□ -1.68
NHLRC1Q6VVB1 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.53□□□□□ -1.68
NHLRC1Q6VVB1 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.53□□□□□ -1.68
NHLRC1Q6VVB1 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.53□□□□□ -1.68
NHLRC1Q6VVB1 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.53□□□□□ -1.68
NHLRC1Q6VVB1 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC4.53□□□□□ -1.68
NHLRC1Q6VVB1 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC4.53□□□□□ -1.68
NHLRC1Q6VVB1 AC068446.3-201ENST00000555285 382 ntBASIC4.53□□□□□ -1.68
NHLRC1Q6VVB1 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.53□□□□□ -1.68
NHLRC1Q6VVB1 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.53□□□□□ -1.68
NHLRC1Q6VVB1 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.53□□□□□ -1.68
NHLRC1Q6VVB1 AC006946.3-201ENST00000609791 756 ntBASIC4.53□□□□□ -1.68
NHLRC1Q6VVB1 AC084824.5-201ENST00000612009 413 ntBASIC4.53□□□□□ -1.68
NHLRC1Q6VVB1 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
NHLRC1Q6VVB1 AC022106.2-201ENST00000620114 757 ntBASIC4.53□□□□□ -1.68
NHLRC1Q6VVB1 CDRT1-208ENST00000630868 794 ntBASIC4.53□□□□□ -1.68
NHLRC1Q6VVB1 OR2L1P-202ENST00000641567 1023 ntBASIC4.53□□□□□ -1.68
NHLRC1Q6VVB1 LINC01739-205ENST00000641890 573 ntBASIC4.53□□□□□ -1.68
NHLRC1Q6VVB1 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
NHLRC1Q6VVB1 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
NHLRC1Q6VVB1 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
NHLRC1Q6VVB1 CR788268.1-201ENST00000603931 1809 ntBASIC4.53□□□□□ -1.68
NHLRC1Q6VVB1 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
NHLRC1Q6VVB1 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
NHLRC1Q6VVB1 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
NHLRC1Q6VVB1 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.53□□□□□ -1.68
NHLRC1Q6VVB1 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.53□□□□□ -1.68
NHLRC1Q6VVB1 AC022031.1-201ENST00000585985 2593 ntBASIC4.53□□□□□ -1.68
NHLRC1Q6VVB1 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
NHLRC1Q6VVB1 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.52□□□□□ -1.69
NHLRC1Q6VVB1 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
NHLRC1Q6VVB1 HSPA8P19-201ENST00000505359 1517 ntBASIC4.52□□□□□ -1.69
NHLRC1Q6VVB1 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
NHLRC1Q6VVB1 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.52□□□□□ -1.69
NHLRC1Q6VVB1 AC134882.1-201ENST00000603738 1676 ntBASIC4.52□□□□□ -1.69
NHLRC1Q6VVB1 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
NHLRC1Q6VVB1 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
NHLRC1Q6VVB1 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
NHLRC1Q6VVB1 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
NHLRC1Q6VVB1 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
NHLRC1Q6VVB1 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC4.52□□□□□ -1.69
NHLRC1Q6VVB1 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
NHLRC1Q6VVB1 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.52□□□□□ -1.69
NHLRC1Q6VVB1 U3.36-201ENST00000408418 213 ntBASIC4.52□□□□□ -1.69
NHLRC1Q6VVB1 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.52□□□□□ -1.69
NHLRC1Q6VVB1 AC234782.4-201ENST00000417646 1048 ntBASIC4.52□□□□□ -1.69
NHLRC1Q6VVB1 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
NHLRC1Q6VVB1 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.52□□□□□ -1.69
NHLRC1Q6VVB1 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.52□□□□□ -1.69
NHLRC1Q6VVB1 AC005189.1-201ENST00000431286 310 ntBASIC4.52□□□□□ -1.69
NHLRC1Q6VVB1 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC4.52□□□□□ -1.69
NHLRC1Q6VVB1 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.52□□□□□ -1.69
NHLRC1Q6VVB1 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.52□□□□□ -1.69
NHLRC1Q6VVB1 ZNF736P6Y-201ENST00000447526 1213 ntBASIC4.52□□□□□ -1.69
NHLRC1Q6VVB1 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
NHLRC1Q6VVB1 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms