Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC099336.2-201ENST00000422457 254 ntBASIC4.27□□□□□ -1.73
CX3CL1P78423 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CX3CL1P78423 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC4.27□□□□□ -1.73
CX3CL1P78423 AL121776.1-201ENST00000429337 372 ntBASIC4.27□□□□□ -1.73
CX3CL1P78423 RPL7AP49-201ENST00000429522 581 ntBASIC4.27□□□□□ -1.73
CX3CL1P78423 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
CX3CL1P78423 AL591438.1-201ENST00000433508 581 ntBASIC4.27□□□□□ -1.73
CX3CL1P78423 GTF2IP3-201ENST00000433887 494 ntBASIC4.27□□□□□ -1.73
CX3CL1P78423 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC4.27□□□□□ -1.73
CX3CL1P78423 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.27□□□□□ -1.73
CX3CL1P78423 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.27□□□□□ -1.73
CX3CL1P78423 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC4.27□□□□□ -1.73
CX3CL1P78423 AC002542.1-201ENST00000440683 193 ntBASIC4.27□□□□□ -1.73
CX3CL1P78423 AL391987.1-201ENST00000441025 200 ntBASIC4.27□□□□□ -1.73
CX3CL1P78423 AL592437.1-201ENST00000443781 492 ntBASIC4.27□□□□□ -1.73
CX3CL1P78423 GAPDHP25-201ENST00000447061 1001 ntBASIC4.27□□□□□ -1.73
CX3CL1P78423 MRPL35P2-201ENST00000448009 511 ntBASIC4.27□□□□□ -1.73
CX3CL1P78423 PRPF38AP1-201ENST00000451976 933 ntBASIC4.27□□□□□ -1.73
CX3CL1P78423 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CX3CL1P78423 AC099560.2-201ENST00000457554 255 ntBASIC4.27□□□□□ -1.73
CX3CL1P78423 AC245028.2-201ENST00000458673 253 ntBASIC4.27□□□□□ -1.73
CX3CL1P78423 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC4.27□□□□□ -1.73
CX3CL1P78423 RN7SL174P-201ENST00000475578 289 ntBASIC4.27□□□□□ -1.73
CX3CL1P78423 AP000797.2-201ENST00000475768 606 ntBASIC4.27□□□□□ -1.73
CX3CL1P78423 RN7SL184P-201ENST00000488308 297 ntBASIC4.27□□□□□ -1.73
CX3CL1P78423 RN7SL547P-201ENST00000490793 290 ntBASIC4.27□□□□□ -1.73
CX3CL1P78423 IGBP1P4-201ENST00000503202 879 ntBASIC4.27□□□□□ -1.73
CX3CL1P78423 AC091860.1-201ENST00000505723 432 ntBASIC4.27□□□□□ -1.73
CX3CL1P78423 AC113420.1-201ENST00000507903 571 ntBASIC4.27□□□□□ -1.73
CX3CL1P78423 AC010285.3-201ENST00000511668 676 ntBASIC4.27□□□□□ -1.73
CX3CL1P78423 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.27□□□□□ -1.73
CX3CL1P78423 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.27□□□□□ -1.73
CX3CL1P78423 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.27□□□□□ -1.73
CX3CL1P78423 MTND1P24-201ENST00000552175 861 ntBASIC4.27□□□□□ -1.73
CX3CL1P78423 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.27□□□□□ -1.73
CX3CL1P78423 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.27□□□□□ -1.73
CX3CL1P78423 PSMA6P4-201ENST00000603247 718 ntBASIC4.27□□□□□ -1.73
CX3CL1P78423 RPP40P2-201ENST00000603596 712 ntBASIC4.27□□□□□ -1.73
CX3CL1P78423 SUGT1P3-202ENST00000604259 383 ntBASIC4.27□□□□□ -1.73
CX3CL1P78423 AC009948.4-201ENST00000604692 675 ntBASIC4.27□□□□□ -1.73
CX3CL1P78423 AC010200.2-201ENST00000605098 235 ntBASIC4.27□□□□□ -1.73
CX3CL1P78423 AL365400.2-201ENST00000605604 902 ntBASIC4.27□□□□□ -1.73
CX3CL1P78423 AC024060.1-201ENST00000607052 494 ntBASIC4.27□□□□□ -1.73
CX3CL1P78423 AC244107.2-201ENST00000611773 76 ntBASIC4.27□□□□□ -1.73
CX3CL1P78423 PART1_2.1-201ENST00000612397 250 ntBASIC4.27□□□□□ -1.73
CX3CL1P78423 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.27□□□□□ -1.73
CX3CL1P78423 AL078595.3-201ENST00000623815 1166 ntBASIC4.27□□□□□ -1.73
CX3CL1P78423 AC092608.3-201ENST00000625017 386 ntBASIC4.27□□□□□ -1.73
CX3CL1P78423 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.27□□□□□ -1.73
CX3CL1P78423 AC017104.5-201ENST00000637647 639 ntBASIC4.27□□□□□ -1.73
CX3CL1P78423 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CX3CL1P78423 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
CX3CL1P78423 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.27□□□□□ -1.73
CX3CL1P78423 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.27□□□□□ -1.73
CX3CL1P78423 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CX3CL1P78423 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CX3CL1P78423 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CX3CL1P78423 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
CX3CL1P78423 AL731532.2-201ENST00000623542 1953 ntBASIC4.27□□□□□ -1.73
CX3CL1P78423 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.27□□□□□ -1.73
CX3CL1P78423 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
CX3CL1P78423 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CX3CL1P78423 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CX3CL1P78423 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CX3CL1P78423 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CX3CL1P78423 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
CX3CL1P78423 AC000374.1-201ENST00000434698 1745 ntBASIC4.26□□□□□ -1.73
CX3CL1P78423 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.26□□□□□ -1.73
CX3CL1P78423 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CX3CL1P78423 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.26□□□□□ -1.73
CX3CL1P78423 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.26□□□□□ -1.73
CX3CL1P78423 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CX3CL1P78423 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
CX3CL1P78423 AC017079.1-201ENST00000333650 415 ntBASIC4.26□□□□□ -1.73
CX3CL1P78423 MIR133B-201ENST00000362210 119 ntBASIC4.26□□□□□ -1.73
CX3CL1P78423 RNU1-19P-201ENST00000363306 165 ntBASIC4.26□□□□□ -1.73
CX3CL1P78423 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
CX3CL1P78423 MIR525-201ENST00000384978 85 ntBASIC4.26□□□□□ -1.73
CX3CL1P78423 AC009804.1-201ENST00000400949 179 ntBASIC4.26□□□□□ -1.73
CX3CL1P78423 HSPA8P15-201ENST00000401676 786 ntBASIC4.26□□□□□ -1.73
CX3CL1P78423 SNORA11.3-201ENST00000408471 128 ntBASIC4.26□□□□□ -1.73
CX3CL1P78423 BTF3P8-201ENST00000414577 526 ntBASIC4.26□□□□□ -1.73
CX3CL1P78423 RPS7P9-201ENST00000414704 586 ntBASIC4.26□□□□□ -1.73
CX3CL1P78423 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.26□□□□□ -1.73
CX3CL1P78423 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.26□□□□□ -1.73
CX3CL1P78423 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC4.26□□□□□ -1.73
CX3CL1P78423 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.26□□□□□ -1.73
CX3CL1P78423 AP001324.1-201ENST00000428553 399 ntBASIC4.26□□□□□ -1.73
CX3CL1P78423 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CX3CL1P78423 MTCYBP15-201ENST00000433123 1127 ntBASIC4.26□□□□□ -1.73
CX3CL1P78423 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC4.26□□□□□ -1.73
CX3CL1P78423 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.26□□□□□ -1.73
CX3CL1P78423 RPS7P5-201ENST00000441482 581 ntBASIC4.26□□□□□ -1.73
CX3CL1P78423 RPS11P7-201ENST00000442125 465 ntBASIC4.26□□□□□ -1.73
CX3CL1P78423 AC016772.1-201ENST00000444170 1261 ntBASIC4.26□□□□□ -1.73
CX3CL1P78423 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.26□□□□□ -1.73
CX3CL1P78423 AC099063.2-201ENST00000446360 662 ntBASIC4.26□□□□□ -1.73
CX3CL1P78423 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.26□□□□□ -1.73
CX3CL1P78423 AL606490.1-201ENST00000452266 765 ntBASIC4.26□□□□□ -1.73
CX3CL1P78423 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms