Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 ADAM5-202ENST00000399789 1942 ntBASIC5.04□□□□□ -1.6
RAE1P78406 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RAE1P78406 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
RAE1P78406 SNORD113-6-201ENST00000363345 75 ntBASIC5.04□□□□□ -1.6
RAE1P78406 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC5.04□□□□□ -1.6
RAE1P78406 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.04□□□□□ -1.6
RAE1P78406 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RAE1P78406 RNA5SP187-201ENST00000384400 119 ntBASIC5.04□□□□□ -1.6
RAE1P78406 MIR589-201ENST00000385238 99 ntBASIC5.04□□□□□ -1.6
RAE1P78406 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
RAE1P78406 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
RAE1P78406 RNA5SP487-201ENST00000410186 122 ntBASIC5.04□□□□□ -1.6
RAE1P78406 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.04□□□□□ -1.6
RAE1P78406 MFSD13B-201ENST00000420133 1290 ntBASIC5.04□□□□□ -1.6
RAE1P78406 OR5AW1P-201ENST00000426334 1006 ntBASIC5.04□□□□□ -1.6
RAE1P78406 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.04□□□□□ -1.6
RAE1P78406 CDY14P-201ENST00000431260 1014 ntBASIC5.04□□□□□ -1.6
RAE1P78406 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.04□□□□□ -1.6
RAE1P78406 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC5.04□□□□□ -1.6
RAE1P78406 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.04□□□□□ -1.6
RAE1P78406 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC5.04□□□□□ -1.6
RAE1P78406 CDY12P-201ENST00000440679 1015 ntBASIC5.04□□□□□ -1.6
RAE1P78406 AC009263.1-201ENST00000441193 1239 ntBASIC5.04□□□□□ -1.6
RAE1P78406 CDY13P-201ENST00000445813 1015 ntBASIC5.04□□□□□ -1.6
RAE1P78406 RPL31P44-201ENST00000447680 377 ntBASIC5.04□□□□□ -1.6
RAE1P78406 MYO5BP2-201ENST00000449815 1277 ntBASIC5.04□□□□□ -1.6
RAE1P78406 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.04□□□□□ -1.6
RAE1P78406 CDY23P-201ENST00000451661 1014 ntBASIC5.04□□□□□ -1.6
RAE1P78406 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.04□□□□□ -1.6
RAE1P78406 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC5.04□□□□□ -1.6
RAE1P78406 ART2BP-201ENST00000453501 499 ntBASIC5.04□□□□□ -1.6
RAE1P78406 DNAJB5P1-201ENST00000454004 806 ntBASIC5.04□□□□□ -1.6
RAE1P78406 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC5.04□□□□□ -1.6
RAE1P78406 XACT-201ENST00000468762 497 ntTSL 5 BASIC5.04□□□□□ -1.6
RAE1P78406 AC090602.1-201ENST00000469695 252 ntBASIC5.04□□□□□ -1.6
RAE1P78406 RPS3AP22-201ENST00000488297 769 ntBASIC5.04□□□□□ -1.6
RAE1P78406 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.04□□□□□ -1.6
RAE1P78406 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC5.04□□□□□ -1.6
RAE1P78406 RN7SL466P-201ENST00000497546 295 ntBASIC5.04□□□□□ -1.6
RAE1P78406 MTATP6P1-201ENST00000514057 681 ntBASIC5.04□□□□□ -1.6
RAE1P78406 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.04□□□□□ -1.6
RAE1P78406 Y_RNA.688-201ENST00000516565 95 ntBASIC5.04□□□□□ -1.6
RAE1P78406 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.04□□□□□ -1.6
RAE1P78406 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.04□□□□□ -1.6
RAE1P78406 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.04□□□□□ -1.6
RAE1P78406 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
RAE1P78406 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.04□□□□□ -1.6
RAE1P78406 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC5.04□□□□□ -1.6
RAE1P78406 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RAE1P78406 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
RAE1P78406 AC125611.1-201ENST00000549563 229 ntBASIC5.04□□□□□ -1.6
RAE1P78406 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.04□□□□□ -1.6
RAE1P78406 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.04□□□□□ -1.6
RAE1P78406 AC022884.2-201ENST00000578535 580 ntBASIC5.04□□□□□ -1.6
RAE1P78406 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.04□□□□□ -1.6
RAE1P78406 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.04□□□□□ -1.6
RAE1P78406 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
RAE1P78406 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC5.04□□□□□ -1.6
RAE1P78406 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC5.04□□□□□ -1.6
RAE1P78406 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.04□□□□□ -1.6
RAE1P78406 EIF1P6-201ENST00000600054 334 ntBASIC5.04□□□□□ -1.6
RAE1P78406 SUGT1P3-202ENST00000604259 383 ntBASIC5.04□□□□□ -1.6
RAE1P78406 AC005252.1-201ENST00000604518 1063 ntBASIC5.04□□□□□ -1.6
RAE1P78406 BNIP3P4-201ENST00000604946 565 ntBASIC5.04□□□□□ -1.6
RAE1P78406 AL392112.1-201ENST00000605115 829 ntBASIC5.04□□□□□ -1.6
RAE1P78406 AC090525.3-201ENST00000605601 189 ntBASIC5.04□□□□□ -1.6
RAE1P78406 AC080013.6-201ENST00000606185 215 ntBASIC5.04□□□□□ -1.6
RAE1P78406 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC5.04□□□□□ -1.6
RAE1P78406 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.04□□□□□ -1.6
RAE1P78406 AC131159.1-201ENST00000621854 213 ntBASIC5.04□□□□□ -1.6
RAE1P78406 MIR8080-201ENST00000622224 89 ntBASIC5.04□□□□□ -1.6
RAE1P78406 AC068137.4-201ENST00000638485 296 ntBASIC5.04□□□□□ -1.6
RAE1P78406 MAPK10-328ENST00000641553 4009 ntBASIC5.04□□□□□ -1.6
RAE1P78406 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RAE1P78406 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.04□□□□□ -1.6
RAE1P78406 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
RAE1P78406 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
RAE1P78406 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
RAE1P78406 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RAE1P78406 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
RAE1P78406 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
RAE1P78406 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
RAE1P78406 AC000367.1-201ENST00000452711 1766 ntBASIC5.04□□□□□ -1.6
RAE1P78406 AC023421.1-201ENST00000590535 1785 ntBASIC5.04□□□□□ -1.6
RAE1P78406 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RAE1P78406 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RAE1P78406 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.03□□□□□ -1.6
RAE1P78406 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RAE1P78406 AC007342.5-201ENST00000571340 2142 ntBASIC5.03□□□□□ -1.6
RAE1P78406 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RAE1P78406 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.03□□□□□ -1.6
RAE1P78406 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.03□□□□□ -1.6
RAE1P78406 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RAE1P78406 AC004158.1-201ENST00000564508 4319 ntBASIC5.03□□□□□ -1.6
RAE1P78406 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
RAE1P78406 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
RAE1P78406 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
RAE1P78406 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.03□□□□□ -1.6
RAE1P78406 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RAE1P78406 AC005294.1-201ENST00000355509 281 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms