Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 AC087894.1-201ENST00000538359 518 ntBASIC4.32□□□□□ -1.72
CDX1P47902 AC137627.1-201ENST00000545761 289 ntBASIC4.32□□□□□ -1.72
CDX1P47902 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC4.32□□□□□ -1.72
CDX1P47902 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.32□□□□□ -1.72
CDX1P47902 AGGF1P9-201ENST00000561884 913 ntBASIC4.32□□□□□ -1.72
CDX1P47902 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.32□□□□□ -1.72
CDX1P47902 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.32□□□□□ -1.72
CDX1P47902 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.32□□□□□ -1.72
CDX1P47902 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.32□□□□□ -1.72
CDX1P47902 RN7SL622P-201ENST00000585292 275 ntBASIC4.32□□□□□ -1.72
CDX1P47902 AC068620.3-201ENST00000602749 560 ntBASIC4.32□□□□□ -1.72
CDX1P47902 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.32□□□□□ -1.72
CDX1P47902 PACRG-210ENST00000611387 279 ntTSL 5 BASIC4.32□□□□□ -1.72
CDX1P47902 AC009318.3-201ENST00000616916 503 ntBASIC4.32□□□□□ -1.72
CDX1P47902 AC023509.5-201ENST00000617434 807 ntBASIC4.32□□□□□ -1.72
CDX1P47902 AC015914.2-201ENST00000618167 288 ntBASIC4.32□□□□□ -1.72
CDX1P47902 AL138955.1-201ENST00000622881 1040 ntBASIC4.32□□□□□ -1.72
CDX1P47902 AP003400.6-201ENST00000624698 740 ntBASIC4.32□□□□□ -1.72
CDX1P47902 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CDX1P47902 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.32□□□□□ -1.72
CDX1P47902 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.32□□□□□ -1.72
CDX1P47902 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CDX1P47902 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CDX1P47902 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CDX1P47902 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CDX1P47902 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.32□□□□□ -1.72
CDX1P47902 AC090971.4-201ENST00000560291 1800 ntBASIC4.32□□□□□ -1.72
CDX1P47902 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CDX1P47902 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
CDX1P47902 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CDX1P47902 AC134882.1-201ENST00000603738 1676 ntBASIC4.32□□□□□ -1.72
CDX1P47902 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CDX1P47902 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CDX1P47902 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CDX1P47902 AC083899.2-201ENST00000423285 1376 ntBASIC4.31□□□□□ -1.72
CDX1P47902 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CDX1P47902 AC104446.1-201ENST00000613728 1321 ntBASIC4.31□□□□□ -1.72
CDX1P47902 CR788268.1-201ENST00000603931 1809 ntBASIC4.31□□□□□ -1.72
CDX1P47902 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CDX1P47902 RNU6-1339P-201ENST00000363574 91 ntBASIC4.31□□□□□ -1.72
CDX1P47902 AC009804.1-201ENST00000400949 179 ntBASIC4.31□□□□□ -1.72
CDX1P47902 DNAJC19P6-201ENST00000401853 280 ntBASIC4.31□□□□□ -1.72
CDX1P47902 AL355143.1-201ENST00000407101 841 ntBASIC4.31□□□□□ -1.72
CDX1P47902 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC4.31□□□□□ -1.72
CDX1P47902 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC4.31□□□□□ -1.72
CDX1P47902 AC246680.2-201ENST00000422106 389 ntBASIC4.31□□□□□ -1.72
CDX1P47902 AC241520.1-201ENST00000422654 1099 ntBASIC4.31□□□□□ -1.72
CDX1P47902 OR6D1P-201ENST00000436165 939 ntBASIC4.31□□□□□ -1.72
CDX1P47902 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.31□□□□□ -1.72
CDX1P47902 AL645931.1-201ENST00000439737 410 ntBASIC4.31□□□□□ -1.72
CDX1P47902 AC073465.2-201ENST00000440938 498 ntBASIC4.31□□□□□ -1.72
CDX1P47902 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.31□□□□□ -1.72
CDX1P47902 AC016772.1-201ENST00000444170 1261 ntBASIC4.31□□□□□ -1.72
CDX1P47902 AC090804.1-201ENST00000448870 490 ntBASIC4.31□□□□□ -1.72
CDX1P47902 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.31□□□□□ -1.72
CDX1P47902 RANP1-206ENST00000455094 651 ntBASIC4.31□□□□□ -1.72
CDX1P47902 GTF2IP12-201ENST00000456547 356 ntBASIC4.31□□□□□ -1.72
CDX1P47902 APOOP2-201ENST00000461561 539 ntBASIC4.31□□□□□ -1.72
CDX1P47902 RPL35AP19-201ENST00000469425 329 ntBASIC4.31□□□□□ -1.72
CDX1P47902 AC074386.1-201ENST00000476560 767 ntBASIC4.31□□□□□ -1.72
CDX1P47902 RPS4XP6-201ENST00000477670 797 ntBASIC4.31□□□□□ -1.72
CDX1P47902 RPL7P39-201ENST00000481157 744 ntBASIC4.31□□□□□ -1.72
CDX1P47902 AC073358.1-201ENST00000505671 684 ntBASIC4.31□□□□□ -1.72
CDX1P47902 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CDX1P47902 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.31□□□□□ -1.72
CDX1P47902 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.31□□□□□ -1.72
CDX1P47902 RNA5SP303-201ENST00000516192 130 ntBASIC4.31□□□□□ -1.72
CDX1P47902 RN7SKP283-201ENST00000517197 270 ntBASIC4.31□□□□□ -1.72
CDX1P47902 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.31□□□□□ -1.72
CDX1P47902 AC104115.2-201ENST00000523026 687 ntBASIC4.31□□□□□ -1.72
CDX1P47902 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC4.31□□□□□ -1.72
CDX1P47902 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CDX1P47902 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.31□□□□□ -1.72
CDX1P47902 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.31□□□□□ -1.72
CDX1P47902 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.31□□□□□ -1.72
CDX1P47902 CYB5AP5-201ENST00000549779 389 ntBASIC4.31□□□□□ -1.72
CDX1P47902 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.31□□□□□ -1.72
CDX1P47902 RN7SL176P-201ENST00000580352 264 ntBASIC4.31□□□□□ -1.72
CDX1P47902 NF1P5-201ENST00000588287 448 ntBASIC4.31□□□□□ -1.72
CDX1P47902 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.31□□□□□ -1.72
CDX1P47902 AP003117.1-201ENST00000602771 554 ntBASIC4.31□□□□□ -1.72
CDX1P47902 SUMO2P15-201ENST00000604285 278 ntBASIC4.31□□□□□ -1.72
CDX1P47902 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.31□□□□□ -1.72
CDX1P47902 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC4.31□□□□□ -1.72
CDX1P47902 AC005156.1-201ENST00000613371 573 ntBASIC4.31□□□□□ -1.72
CDX1P47902 AC007204.2-201ENST00000615022 616 ntBASIC4.31□□□□□ -1.72
CDX1P47902 CDRT1-208ENST00000630868 794 ntBASIC4.31□□□□□ -1.72
CDX1P47902 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CDX1P47902 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CDX1P47902 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
CDX1P47902 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CDX1P47902 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CDX1P47902 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.31□□□□□ -1.72
CDX1P47902 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CDX1P47902 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CDX1P47902 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.31□□□□□ -1.72
CDX1P47902 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.31□□□□□ -1.72
CDX1P47902 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CDX1P47902 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDX1P47902 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms