Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
HTTP42858 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
HTTP42858 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
HTTP42858 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.65□□□□□ -1.67
HTTP42858 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.65□□□□□ -1.67
HTTP42858 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
HTTP42858 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
HTTP42858 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.64□□□□□ -1.67
HTTP42858 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.64□□□□□ -1.67
HTTP42858 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.64□□□□□ -1.67
HTTP42858 DROSHA-201ENST00000344624 5102 ntAPPRIS P4 TSL 5 BASIC4.64□□□□□ -1.67
HTTP42858 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.64□□□□□ -1.67
HTTP42858 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HTTP42858 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
HTTP42858 NACA-203ENST00000454682 6629 ntTSL 5 BASIC4.64□□□□□ -1.67
HTTP42858 TRIM60P17-201ENST00000415181 719 ntBASIC4.64□□□□□ -1.67
HTTP42858 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4.64□□□□□ -1.67
HTTP42858 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
HTTP42858 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.64□□□□□ -1.67
HTTP42858 RPL37P3-201ENST00000456825 293 ntBASIC4.64□□□□□ -1.67
HTTP42858 SETP14-201ENST00000497538 873 ntBASIC4.64□□□□□ -1.67
HTTP42858 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.64□□□□□ -1.67
HTTP42858 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HTTP42858 ELOCP35-201ENST00000604289 336 ntBASIC4.64□□□□□ -1.67
HTTP42858 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HTTP42858 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
HTTP42858 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HTTP42858 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
HTTP42858 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HTTP42858 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC4.64□□□□□ -1.67
HTTP42858 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HTTP42858 AC104581.5-201ENST00000624171 7141 ntBASIC4.64□□□□□ -1.67
HTTP42858 PRO1804-201ENST00000623780 2050 ntBASIC4.64□□□□□ -1.67
HTTP42858 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
HTTP42858 SNORA48.2-201ENST00000390926 124 ntBASIC4.63□□□□□ -1.67
HTTP42858 RPL21P91-201ENST00000429231 479 ntBASIC4.63□□□□□ -1.67
HTTP42858 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC4.63□□□□□ -1.67
HTTP42858 AC111000.6-201ENST00000514471 709 ntBASIC4.63□□□□□ -1.67
HTTP42858 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC4.63□□□□□ -1.67
HTTP42858 AP002360.3-201ENST00000607673 710 ntBASIC4.63□□□□□ -1.67
HTTP42858 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
HTTP42858 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HTTP42858 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HTTP42858 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.63□□□□□ -1.67
HTTP42858 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.63□□□□□ -1.67
HTTP42858 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
HTTP42858 URB1-201ENST00000382751 10832 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HTTP42858 RNA5SP453-201ENST00000362503 119 ntBASIC4.63□□□□□ -1.67
HTTP42858 RN7SKP74-201ENST00000362849 309 ntBASIC4.63□□□□□ -1.67
HTTP42858 U1.1-201ENST00000384101 164 ntBASIC4.63□□□□□ -1.67
HTTP42858 AC062016.2-201ENST00000420950 676 ntBASIC4.63□□□□□ -1.67
HTTP42858 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HTTP42858 ATP1B1P1-201ENST00000509767 915 ntBASIC4.63□□□□□ -1.67
HTTP42858 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.63□□□□□ -1.67
HTTP42858 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
HTTP42858 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HTTP42858 EOGT-210ENST00000615922 1931 ntBASIC4.63□□□□□ -1.67
HTTP42858 AL136164.3-201ENST00000624429 3978 ntBASIC4.63□□□□□ -1.67
HTTP42858 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.63□□□□□ -1.67
HTTP42858 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.63□□□□□ -1.67
HTTP42858 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.63□□□□□ -1.67
HTTP42858 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.63□□□□□ -1.67
HTTP42858 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.63□□□□□ -1.67
HTTP42858 AC006011.1-201ENST00000442758 349 ntBASIC4.63□□□□□ -1.67
HTTP42858 PDSS1P2-201ENST00000449397 678 ntBASIC4.63□□□□□ -1.67
HTTP42858 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.63□□□□□ -1.67
HTTP42858 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.63□□□□□ -1.67
HTTP42858 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.63□□□□□ -1.67
HTTP42858 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC4.63□□□□□ -1.67
HTTP42858 AC007546.2-201ENST00000623996 360 ntBASIC4.63□□□□□ -1.67
HTTP42858 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.63□□□□□ -1.67
HTTP42858 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HTTP42858 PPARA-203ENST00000407236 9995 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HTTP42858 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HTTP42858 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
HTTP42858 RPL7P58-201ENST00000402913 758 ntBASIC4.62□□□□□ -1.67
HTTP42858 BX510359.1-201ENST00000456973 237 ntBASIC4.62□□□□□ -1.67
HTTP42858 AC092691.2-201ENST00000461787 803 ntBASIC4.62□□□□□ -1.67
HTTP42858 AC114878.2-201ENST00000604863 1251 ntBASIC4.62□□□□□ -1.67
HTTP42858 YPEL5P2-201ENST00000605553 359 ntBASIC4.62□□□□□ -1.67
HTTP42858 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
HTTP42858 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HTTP42858 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
HTTP42858 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC4.62□□□□□ -1.67
HTTP42858 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HTTP42858 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC4.62□□□□□ -1.67
HTTP42858 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
HTTP42858 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.62□□□□□ -1.67
HTTP42858 Y_RNA.500-201ENST00000384466 111 ntBASIC4.62□□□□□ -1.67
HTTP42858 AL031121.1-201ENST00000406553 254 ntBASIC4.62□□□□□ -1.67
HTTP42858 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.62□□□□□ -1.67
HTTP42858 AC104333.2-201ENST00000422630 192 ntBASIC4.62□□□□□ -1.67
HTTP42858 AC006994.1-201ENST00000438212 839 ntBASIC4.62□□□□□ -1.67
HTTP42858 RPS3AP6-201ENST00000484430 795 ntBASIC4.62□□□□□ -1.67
HTTP42858 IGHVIII-13-1-201ENST00000517613 291 ntBASIC4.62□□□□□ -1.67
HTTP42858 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.62□□□□□ -1.67
HTTP42858 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.62□□□□□ -1.67
HTTP42858 AC244505.7-201ENST00000599675 272 ntBASIC4.62□□□□□ -1.67
HTTP42858 AL160290.3-201ENST00000604869 165 ntBASIC4.62□□□□□ -1.67
HTTP42858 AC009779.8-201ENST00000641684 4384 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms